RNA–Protein interactions for RNA: ENST00000221448.9

SNRNP70-201, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2 BASIC

Gene SNRNP70, Length 1,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-201ENST00000221448 NISCHQ9Y2I1 1504 aa53.62■■■■■ 6.17
SNRNP70-201ENST00000221448 CCDC180Q9P1Z9 1646 aa47.34■■■■■ 5.17
SNRNP70-201ENST00000221448 ABCC9O60706 1549 aa45.97■■■■■ 4.95
SNRNP70-201ENST00000221448 DCAF8L2P0C7V8 631 aa44.8■■■■■ 4.76
SNRNP70-201ENST00000221448 ZCCHC6Q5VYS8 1495 aaKnown RBP44.77■■■■■ 4.76
SNRNP70-201ENST00000221448 NACADO15069 1562 aa44.39■■■■■ 4.7
SNRNP70-201ENST00000221448 RB1CC1Q8TDY2 1594 aa44.33■■■■■ 4.69
SNRNP70-201ENST00000221448 DCAF1Q9Y4B6 1507 aa44.28■■■■■ 4.68
SNRNP70-201ENST00000221448 MYO15BQ96JP2 1530 aa44.23■■■■■ 4.67
SNRNP70-201ENST00000221448 UNC13AQ9UPW8 1703 aa43.41■■■■■ 4.54
SNRNP70-201ENST00000221448 SCRIBQ14160 1630 aa43.41■■■■■ 4.54
SNRNP70-201ENST00000221448 PABPN1Q86U42 306 aaKnown RBP eCLIP43.11■■■■■ 4.492e-12■■■■□ 21.8
SNRNP70-201ENST00000221448 BICRAQ9NZM4 1560 aa43.02■■■■■ 4.48
SNRNP70-201ENST00000221448 SHROOM4Q9ULL8 1493 aa42.93■■■■■ 4.46
SNRNP70-201ENST00000221448 EIF4G1Q04637 1599 aaKnown RBP41.84■■■■■ 4.29
SNRNP70-201ENST00000221448 CECR2Q9BXF3 1484 aa41.79■■■■■ 4.28
SNRNP70-201ENST00000221448 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
SNRNP70-201ENST00000221448 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
SNRNP70-201ENST00000221448 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
SNRNP70-201ENST00000221448 SMARCA4P51532 1647 aa41.5■■■■■ 4.23
SNRNP70-201ENST00000221448 MROH2BQ7Z745 1585 aa41.39■■■■■ 4.22
SNRNP70-201ENST00000221448 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
SNRNP70-201ENST00000221448 RSF1Q96T23 1441 aaPredicted RBP41.11■■■■■ 4.17
SNRNP70-201ENST00000221448 SMARCA2P51531 1590 aa41.06■■■■■ 4.16
SNRNP70-201ENST00000221448 WIZO95785 1651 aa41.01■■■■■ 4.16
SNRNP70-201ENST00000221448 PEG3Q9GZU2 1588 aa41■■■■■ 4.15
SNRNP70-201ENST00000221448 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
SNRNP70-201ENST00000221448 BAZ1BQ9UIG0 1483 aaKnown RBP40.84■■■■■ 4.13
SNRNP70-201ENST00000221448 HMGXB3Q12766 1538 aa40.81■■■■■ 4.12
SNRNP70-201ENST00000221448 SUPT5HO00267 1087 aaKnown RBP40.66■■■■■ 4.1
SNRNP70-201ENST00000221448 TOP2AP11388 1531 aaKnown RBP40.51■■■■■ 4.08
SNRNP70-201ENST00000221448 CCDC88BA6NC98 1476 aa40.1■■■■■ 4.01
SNRNP70-201ENST00000221448 NESP48681 1621 aa39.96■■■■□ 3.99
SNRNP70-201ENST00000221448 CADPSQ9ULU8 1353 aa39.86■■■■□ 3.97
SNRNP70-201ENST00000221448 LAMC3Q9Y6N6 1575 aa39.81■■■■□ 3.96
SNRNP70-201ENST00000221448 CFTRP13569 1480 aa39.72■■■■□ 3.95
SNRNP70-201ENST00000221448 ERCC6Q03468 1493 aa39.55■■■■□ 3.92
SNRNP70-201ENST00000221448 PDS5BQ9NTI5 1447 aa39.55■■■■□ 3.92
SNRNP70-201ENST00000221448 KIF21AQ7Z4S6 1674 aa39.47■■■■□ 3.91
SNRNP70-201ENST00000221448 PRDM2Q13029 1718 aa39.45■■■■□ 3.91
SNRNP70-201ENST00000221448 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
SNRNP70-201ENST00000221448 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
SNRNP70-201ENST00000221448 THOC2Q8NI27 1593 aaKnown RBP39.13■■■■□ 3.86
SNRNP70-201ENST00000221448 MRC2Q9UBG0 1479 aa39.11■■■■□ 3.85
SNRNP70-201ENST00000221448 URB2Q14146 1524 aaKnown RBP39■■■■□ 3.83
SNRNP70-201ENST00000221448 WDR62O43379 1518 aa38.95■■■■□ 3.83
SNRNP70-201ENST00000221448 ABCC8Q09428 1581 aa38.87■■■■□ 3.81
SNRNP70-201ENST00000221448 TOPBP1Q92547 1522 aa38.85■■■■□ 3.81
SNRNP70-201ENST00000221448 DNMBPQ6XZF7 1577 aa38.82■■■■□ 3.81
SNRNP70-201ENST00000221448 CUX2O14529 1486 aa38.81■■■■□ 3.8
SNRNP70-201ENST00000221448 CUX1P39880 1505 aa38.79■■■■□ 3.8
SNRNP70-201ENST00000221448 WRNQ14191 1432 aaPredicted RBP eCLIP38.74■■■■□ 3.799e-10■■□□□ 11.7
SNRNP70-201ENST00000221448 SYNJ1O43426 1573 aa38.64■■■■□ 3.78
SNRNP70-201ENST00000221448 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
SNRNP70-201ENST00000221448 FGD5Q6ZNL6 1462 aa38.56■■■■□ 3.76
SNRNP70-201ENST00000221448 TOP2BQ02880 1626 aa38.56■■■■□ 3.76
SNRNP70-201ENST00000221448 BIVM-ERCC5R4GMW8 1640 aa38.54■■■■□ 3.76
SNRNP70-201ENST00000221448 RAD54L2Q9Y4B4 1467 aa38.46■■■■□ 3.75
SNRNP70-201ENST00000221448 SOGA1O94964 1423 aa38.43■■■■□ 3.74
SNRNP70-201ENST00000221448 IFT140Q96RY7 1462 aa38.41■■■■□ 3.74
SNRNP70-201ENST00000221448 TARBP1Q13395 1621 aaKnown RBP38.37■■■■□ 3.73
SNRNP70-201ENST00000221448 TRIM41Q8WV44 630 aa38.3■■■■□ 3.72
SNRNP70-201ENST00000221448 ZNF608Q9ULD9 1512 aaPredicted RBP38.3■■■■□ 3.72
SNRNP70-201ENST00000221448 CHIC1Q5VXU3 224 aa38.2■■■■□ 3.71
SNRNP70-201ENST00000221448 TDRD9Q8NDG6 1382 aaKnown RBP38.2■■■■□ 3.71
SNRNP70-201ENST00000221448 WDR97A6NE52 1622 aa38.17■■■■□ 3.7
SNRNP70-201ENST00000221448 AQRO60306 1485 aaKnown RBP eCLIP38.17■■■■□ 3.76e-9■■■■■ 36.7
SNRNP70-201ENST00000221448 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
SNRNP70-201ENST00000221448 EIF4G3O43432 1585 aaKnown RBP38.12■■■■□ 3.69
SNRNP70-201ENST00000221448 GAPVD1Q14C86 1478 aa37.99■■■■□ 3.67
SNRNP70-201ENST00000221448 ABCA5Q8WWZ7 1642 aa37.97■■■■□ 3.67
SNRNP70-201ENST00000221448 GRIN2BQ13224 1484 aa37.87■■■■□ 3.65
SNRNP70-201ENST00000221448 PBRM1Q86U86 1689 aa37.87■■■■□ 3.65
SNRNP70-201ENST00000221448 KIF27Q86VH2 1401 aa37.87■■■■□ 3.65
SNRNP70-201ENST00000221448 RUSC2Q8N2Y8 1516 aa37.81■■■■□ 3.64
SNRNP70-201ENST00000221448 SNAPC4Q5SXM2 1469 aa37.79■■■■□ 3.64
SNRNP70-201ENST00000221448 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
SNRNP70-201ENST00000221448 MAGI1Q96QZ7 1491 aaPredicted RBP37.68■■■■□ 3.62
SNRNP70-201ENST00000221448 FBLN2P98095 1184 aa37.68■■■■□ 3.62
SNRNP70-201ENST00000221448 IGF1RP08069 1367 aa37.67■■■■□ 3.62
SNRNP70-201ENST00000221448 FAM9AQ8IZU1 332 aaPredicted RBP37.61■■■■□ 3.61
SNRNP70-201ENST00000221448 CHMP7Q8WUX9 453 aaPredicted RBP37.58■■■■□ 3.61
SNRNP70-201ENST00000221448 ADAMTS12P58397 1594 aa37.58■■■■□ 3.61
SNRNP70-201ENST00000221448 CHD1O14646 1710 aa37.56■■■■□ 3.6
SNRNP70-201ENST00000221448 SYNJ2O15056 1496 aa37.55■■■■□ 3.6
SNRNP70-201ENST00000221448 FHAD1B1AJZ9 1412 aa37.53■■■■□ 3.6
SNRNP70-201ENST00000221448 CUL7Q14999 1698 aa37.48■■■■□ 3.59
SNRNP70-201ENST00000221448 CARMIL1Q5VZK9 1371 aa37.47■■■■□ 3.59
SNRNP70-201ENST00000221448 EEA1Q15075 1411 aa37.45■■■■□ 3.59
SNRNP70-201ENST00000221448 CSRNP3Q8WYN3 585 aa37.43■■■■□ 3.58
SNRNP70-201ENST00000221448 OSCARQ8IYS5 282 aa37.41■■■■□ 3.58
SNRNP70-201ENST00000221448 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
SNRNP70-201ENST00000221448 RAPGEF2Q9Y4G8 1499 aa37.28■■■■□ 3.56
SNRNP70-201ENST00000221448 PRXQ9BXM0 1461 aa37.27■■■■□ 3.56
SNRNP70-201ENST00000221448 CEP170Q5SW79 1584 aa37.21■■■■□ 3.55
SNRNP70-201ENST00000221448 NUP160Q12769 1436 aa37.18■■■■□ 3.54
SNRNP70-201ENST00000221448 EHMT2Q96KQ7 1210 aa37.18■■■■□ 3.54
SNRNP70-201ENST00000221448 CLASP1Q7Z460 1538 aa37.1■■■■□ 3.53
SNRNP70-201ENST00000221448 KIF21BO75037 1637 aa37.07■■■■□ 3.52
SNRNP70-201ENST00000221448 DNAJC5Q9H3Z4 198 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms