RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
KPNB1-204ENST00000577875 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
KPNB1-204ENST00000577875 PHF23Q9BUL5 403 aaPredicted RBP12.42□□□□□ -0.42
KPNB1-204ENST00000577875 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
KPNB1-204ENST00000577875 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
KPNB1-204ENST00000577875 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
KPNB1-204ENST00000577875 ABCC9O60706 1549 aa11.36□□□□□ -0.59
KPNB1-204ENST00000577875 CCDC180Q9P1Z9 1646 aa11.02□□□□□ -0.65
KPNB1-204ENST00000577875 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
KPNB1-204ENST00000577875 ADRA2BP18089 450 aa10.93□□□□□ -0.66
KPNB1-204ENST00000577875 FOXD1Q16676 465 aa10.82□□□□□ -0.68
KPNB1-204ENST00000577875 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
KPNB1-204ENST00000577875 KCNA4P22459 653 aa10.7□□□□□ -0.7
KPNB1-204ENST00000577875 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
KPNB1-204ENST00000577875 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
KPNB1-204ENST00000577875 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
KPNB1-204ENST00000577875 NACADO15069 1562 aa10.5□□□□□ -0.73
KPNB1-204ENST00000577875 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
KPNB1-204ENST00000577875 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
KPNB1-204ENST00000577875 PIAS4Q8N2W9 510 aaPredicted RBP10.36□□□□□ -0.75
KPNB1-204ENST00000577875 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
KPNB1-204ENST00000577875 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
KPNB1-204ENST00000577875 CECR2Q9BXF3 1484 aa10.32□□□□□ -0.76
KPNB1-204ENST00000577875 SHROOM4Q9ULL8 1493 aa10.3□□□□□ -0.76
KPNB1-204ENST00000577875 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
KPNB1-204ENST00000577875 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
KPNB1-204ENST00000577875 MYO15BQ96JP2 1530 aa10.22□□□□□ -0.77
KPNB1-204ENST00000577875 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.77
KPNB1-204ENST00000577875 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
KPNB1-204ENST00000577875 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
KPNB1-204ENST00000577875 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
KPNB1-204ENST00000577875 CUX2O14529 1486 aa10.11□□□□□ -0.79
KPNB1-204ENST00000577875 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
KPNB1-204ENST00000577875 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
KPNB1-204ENST00000577875 ERCC6Q03468 1493 aa9.9□□□□□ -0.83
KPNB1-204ENST00000577875 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
KPNB1-204ENST00000577875 SCAF1Q9H7N4 1312 aaKnown RBP9.88□□□□□ -0.83
KPNB1-204ENST00000577875 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
KPNB1-204ENST00000577875 ZBTB22O15209 634 aa9.85□□□□□ -0.83
KPNB1-204ENST00000577875 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
KPNB1-204ENST00000577875 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
KPNB1-204ENST00000577875 MSH5O43196 834 aa9.76□□□□□ -0.85
KPNB1-204ENST00000577875 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
KPNB1-204ENST00000577875 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
KPNB1-204ENST00000577875 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
KPNB1-204ENST00000577875 NCAPD3P42695 1498 aa9.65□□□□□ -0.87
KPNB1-204ENST00000577875 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
KPNB1-204ENST00000577875 HMGXB3Q12766 1538 aa9.59□□□□□ -0.87
KPNB1-204ENST00000577875 NESP48681 1621 aa9.59□□□□□ -0.87
KPNB1-204ENST00000577875 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
KPNB1-204ENST00000577875 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
KPNB1-204ENST00000577875 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
KPNB1-204ENST00000577875 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
KPNB1-204ENST00000577875 KIF21AQ7Z4S6 1674 aa9.53□□□□□ -0.88
KPNB1-204ENST00000577875 PDS5BQ9NTI5 1447 aa9.49□□□□□ -0.89
KPNB1-204ENST00000577875 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
KPNB1-204ENST00000577875 WDR62O43379 1518 aa9.46□□□□□ -0.9
KPNB1-204ENST00000577875 MRC2Q9UBG0 1479 aa9.45□□□□□ -0.9
KPNB1-204ENST00000577875 RIMBP3CA6NJZ7 1639 aa9.45□□□□□ -0.9
KPNB1-204ENST00000577875 RIMBP3BA6NNM3 1639 aa9.45□□□□□ -0.9
KPNB1-204ENST00000577875 RIMBP3Q9UFD9 1639 aa9.45□□□□□ -0.9
KPNB1-204ENST00000577875 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
KPNB1-204ENST00000577875 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
KPNB1-204ENST00000577875 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
KPNB1-204ENST00000577875 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
KPNB1-204ENST00000577875 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
KPNB1-204ENST00000577875 PEG3Q9GZU2 1588 aa9.37□□□□□ -0.91
KPNB1-204ENST00000577875 ARHGEF11O15085 1522 aa9.36□□□□□ -0.91
KPNB1-204ENST00000577875 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
KPNB1-204ENST00000577875 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
KPNB1-204ENST00000577875 TRHP20396 242 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-204ENST00000577875 RTN4Q9NQC3 1192 aaKnown RBP9.3□□□□□ -0.92
KPNB1-204ENST00000577875 MYCNP04198 464 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-204ENST00000577875 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-204ENST00000577875 ATXN8OSP0DMR3 200 aa9.25□□□□□ -0.93
KPNB1-204ENST00000577875 SLC24A1O60721 1099 aa9.23□□□□□ -0.93
KPNB1-204ENST00000577875 FKBP8Q14318 412 aa9.23□□□□□ -0.93
KPNB1-204ENST00000577875 ARAP1Q96P48 1450 aa9.22□□□□□ -0.93
KPNB1-204ENST00000577875 FANCD2Q9BXW9 1451 aa9.22□□□□□ -0.93
KPNB1-204ENST00000577875 CYB5RLQ6IPT4 315 aa9.22□□□□□ -0.93
KPNB1-204ENST00000577875 RSF1Q96T23 1441 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-204ENST00000577875 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
KPNB1-204ENST00000577875 IFT140Q96RY7 1462 aa9.15□□□□□ -0.95
KPNB1-204ENST00000577875 CHD1O14646 1710 aa9.13□□□□□ -0.95
KPNB1-204ENST00000577875 MROH2BQ7Z745 1585 aa9.12□□□□□ -0.95
KPNB1-204ENST00000577875 CFTRP13569 1480 aa9.11□□□□□ -0.95
KPNB1-204ENST00000577875 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
KPNB1-204ENST00000577875 ZNF608Q9ULD9 1512 aaPredicted RBP9.1□□□□□ -0.95
KPNB1-204ENST00000577875 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
KPNB1-204ENST00000577875 PRDM2Q13029 1718 aa9.08□□□□□ -0.96
KPNB1-204ENST00000577875 DCAF8L1A6NGE4 600 aa9.08□□□□□ -0.96
KPNB1-204ENST00000577875 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
KPNB1-204ENST00000577875 CLASP1Q7Z460 1538 aa9.02□□□□□ -0.97
KPNB1-204ENST00000577875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.02□□□□□ -0.979e-9■□□□□ 9.3
KPNB1-204ENST00000577875 WIZO95785 1651 aa9□□□□□ -0.97
KPNB1-204ENST00000577875 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
KPNB1-204ENST00000577875 TOPBP1Q92547 1522 aa8.99□□□□□ -0.97
KPNB1-204ENST00000577875 SYNJ1O43426 1573 aa8.99□□□□□ -0.97
KPNB1-204ENST00000577875 TARBP1Q13395 1621 aaKnown RBP8.96□□□□□ -0.98
KPNB1-204ENST00000577875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms