RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 NISCHQ9Y2I1 1504 aa51.59■■■■■ 5.85
SNRNP70-209ENST00000601065 CCDC180Q9P1Z9 1646 aa45.36■■■■■ 4.85
SNRNP70-209ENST00000601065 ABCC9O60706 1549 aa43.43■■■■■ 4.54
SNRNP70-209ENST00000601065 ZCCHC6Q5VYS8 1495 aaKnown RBP43.2■■■■■ 4.51
SNRNP70-209ENST00000601065 DCAF8L2P0C7V8 631 aa42.71■■■■■ 4.43
SNRNP70-209ENST00000601065 DCAF1Q9Y4B6 1507 aa42.7■■■■■ 4.43
SNRNP70-209ENST00000601065 MYO15BQ96JP2 1530 aa42.48■■■■■ 4.39
SNRNP70-209ENST00000601065 NACADO15069 1562 aa42.4■■■■■ 4.38
SNRNP70-209ENST00000601065 RB1CC1Q8TDY2 1594 aa42.19■■■■■ 4.34
SNRNP70-209ENST00000601065 SCRIBQ14160 1630 aa41.54■■■■■ 4.24
SNRNP70-209ENST00000601065 SHROOM4Q9ULL8 1493 aa41.46■■■■■ 4.23
SNRNP70-209ENST00000601065 UNC13AQ9UPW8 1703 aa41.31■■■■■ 4.2
SNRNP70-209ENST00000601065 BICRAQ9NZM4 1560 aa40.92■■■■■ 4.14
SNRNP70-209ENST00000601065 PABPN1Q86U42 306 aaKnown RBP eCLIP40.78■■■■■ 4.122e-12■■■■□ 21.8
SNRNP70-209ENST00000601065 CECR2Q9BXF3 1484 aa40.1■■■■■ 4.01
SNRNP70-209ENST00000601065 BAZ1AQ9NRL2 1556 aaPredicted RBP39.9■■■■□ 3.98
SNRNP70-209ENST00000601065 SMARCA4P51532 1647 aa39.81■■■■□ 3.96
SNRNP70-209ENST00000601065 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
SNRNP70-209ENST00000601065 EIF4G1Q04637 1599 aaKnown RBP39.74■■■■□ 3.95
SNRNP70-209ENST00000601065 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
SNRNP70-209ENST00000601065 SUPT5HO00267 1087 aaKnown RBP39.54■■■■□ 3.92
SNRNP70-209ENST00000601065 WIZO95785 1651 aa39.44■■■■□ 3.9
SNRNP70-209ENST00000601065 PEG3Q9GZU2 1588 aa39.39■■■■□ 3.9
SNRNP70-209ENST00000601065 CC2D2AQ9P2K1 1620 aa39.33■■■■□ 3.89
SNRNP70-209ENST00000601065 ATAD2BQ9ULI0 1458 aa39.32■■■■□ 3.89
SNRNP70-209ENST00000601065 SMARCA2P51531 1590 aa39.3■■■■□ 3.88
SNRNP70-209ENST00000601065 NCAPD3P42695 1498 aa39.12■■■■□ 3.85
SNRNP70-209ENST00000601065 BAZ1BQ9UIG0 1483 aaKnown RBP39.06■■■■□ 3.84
SNRNP70-209ENST00000601065 TOP2AP11388 1531 aaKnown RBP39.04■■■■□ 3.84
SNRNP70-209ENST00000601065 HMGXB3Q12766 1538 aa39.02■■■■□ 3.84
SNRNP70-209ENST00000601065 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
SNRNP70-209ENST00000601065 CCDC88BA6NC98 1476 aa38.6■■■■□ 3.77
SNRNP70-209ENST00000601065 CFTRP13569 1480 aa38.06■■■■□ 3.68
SNRNP70-209ENST00000601065 CADPSQ9ULU8 1353 aa38.05■■■■□ 3.68
SNRNP70-209ENST00000601065 LAMC3Q9Y6N6 1575 aa37.92■■■■□ 3.66
SNRNP70-209ENST00000601065 NESP48681 1621 aa37.91■■■■□ 3.66
SNRNP70-209ENST00000601065 PRDM2Q13029 1718 aa37.84■■■■□ 3.65
SNRNP70-209ENST00000601065 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
SNRNP70-209ENST00000601065 FANCD2Q9BXW9 1451 aa37.62■■■■□ 3.61
SNRNP70-209ENST00000601065 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
SNRNP70-209ENST00000601065 CHIC1Q5VXU3 224 aa37.52■■■■□ 3.6
SNRNP70-209ENST00000601065 KIF21AQ7Z4S6 1674 aa37.48■■■■□ 3.59
SNRNP70-209ENST00000601065 CEP164Q9UPV0 1460 aa37.46■■■■□ 3.59
SNRNP70-209ENST00000601065 WRNQ14191 1432 aaPredicted RBP eCLIP37.41■■■■□ 3.589e-10■■□□□ 11.7
SNRNP70-209ENST00000601065 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
SNRNP70-209ENST00000601065 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
SNRNP70-209ENST00000601065 TRIM41Q8WV44 630 aa37.27■■■■□ 3.56
SNRNP70-209ENST00000601065 CUX1P39880 1505 aa37.27■■■■□ 3.56
SNRNP70-209ENST00000601065 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
SNRNP70-209ENST00000601065 BIVM-ERCC5R4GMW8 1640 aa37.2■■■■□ 3.55
SNRNP70-209ENST00000601065 URB2Q14146 1524 aaKnown RBP37.19■■■■□ 3.54
SNRNP70-209ENST00000601065 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
SNRNP70-209ENST00000601065 MRC2Q9UBG0 1479 aa37.17■■■■□ 3.54
SNRNP70-209ENST00000601065 TOPBP1Q92547 1522 aa37.14■■■■□ 3.54
SNRNP70-209ENST00000601065 THOC2Q8NI27 1593 aaKnown RBP37.08■■■■□ 3.53
SNRNP70-209ENST00000601065 WDR62O43379 1518 aa37.03■■■■□ 3.52
SNRNP70-209ENST00000601065 FGD5Q6ZNL6 1462 aa36.97■■■■□ 3.51
SNRNP70-209ENST00000601065 POLA1P09884 1462 aaPredicted RBP36.91■■■■□ 3.5
SNRNP70-209ENST00000601065 SOGA1O94964 1423 aa36.76■■■■□ 3.47
SNRNP70-209ENST00000601065 RAD54L2Q9Y4B4 1467 aa36.75■■■■□ 3.47
SNRNP70-209ENST00000601065 CUX2O14529 1486 aa36.73■■■■□ 3.47
SNRNP70-209ENST00000601065 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
SNRNP70-209ENST00000601065 ABCA10Q8WWZ4 1543 aa36.65■■■■□ 3.46
SNRNP70-209ENST00000601065 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
SNRNP70-209ENST00000601065 WDR97A6NE52 1622 aa36.61■■■■□ 3.45
SNRNP70-209ENST00000601065 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
SNRNP70-209ENST00000601065 KIF27Q86VH2 1401 aa36.53■■■■□ 3.44
SNRNP70-209ENST00000601065 EEA1Q15075 1411 aa36.52■■■■□ 3.44
SNRNP70-209ENST00000601065 FAM9AQ8IZU1 332 aaPredicted RBP36.51■■■■□ 3.44
SNRNP70-209ENST00000601065 TDRD9Q8NDG6 1382 aaKnown RBP36.44■■■■□ 3.42
SNRNP70-209ENST00000601065 ABCA5Q8WWZ7 1642 aa36.42■■■■□ 3.42
SNRNP70-209ENST00000601065 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
SNRNP70-209ENST00000601065 GAPVD1Q14C86 1478 aa36.35■■■■□ 3.41
SNRNP70-209ENST00000601065 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.416e-9■■■■■ 36.7
SNRNP70-209ENST00000601065 CSRNP3Q8WYN3 585 aa36.35■■■■□ 3.41
SNRNP70-209ENST00000601065 EIF4G3O43432 1585 aaKnown RBP36.3■■■■□ 3.4
SNRNP70-209ENST00000601065 IGF1RP08069 1367 aa36.27■■■■□ 3.4
SNRNP70-209ENST00000601065 ERICH3Q5RHP9 1530 aa36.23■■■■□ 3.39
SNRNP70-209ENST00000601065 PBRM1Q86U86 1689 aa36.22■■■■□ 3.39
SNRNP70-209ENST00000601065 GRIN2BQ13224 1484 aa36.19■■■■□ 3.38
SNRNP70-209ENST00000601065 PRXQ9BXM0 1461 aa36.12■■■■□ 3.37
SNRNP70-209ENST00000601065 CUL7Q14999 1698 aa36.1■■■■□ 3.37
SNRNP70-209ENST00000601065 KIF21BO75037 1637 aa36.09■■■■□ 3.37
SNRNP70-209ENST00000601065 CARMIL1Q5VZK9 1371 aa36.07■■■■□ 3.37
SNRNP70-209ENST00000601065 LOC105371045A0A1W2PR82 267 aa36.02■■■■□ 3.36
SNRNP70-209ENST00000601065 SNAPC4Q5SXM2 1469 aa36.02■■■■□ 3.36
SNRNP70-209ENST00000601065 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
SNRNP70-209ENST00000601065 RAPGEF2Q9Y4G8 1499 aa35.99■■■■□ 3.35
SNRNP70-209ENST00000601065 EHMT2Q96KQ7 1210 aa35.99■■■■□ 3.35
SNRNP70-209ENST00000601065 MAGI1Q96QZ7 1491 aaPredicted RBP35.98■■■■□ 3.35
SNRNP70-209ENST00000601065 GOLGA3Q08378 1498 aa35.96■■■■□ 3.35
SNRNP70-209ENST00000601065 FHAD1B1AJZ9 1412 aa35.96■■■■□ 3.35
SNRNP70-209ENST00000601065 SYNJ2O15056 1496 aa35.83■■■■□ 3.33
SNRNP70-209ENST00000601065 UBTFP17480 764 aaKnown RBP35.79■■■■□ 3.32
SNRNP70-209ENST00000601065 GRIN2AQ12879 1464 aa35.75■■■■□ 3.31
SNRNP70-209ENST00000601065 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
SNRNP70-209ENST00000601065 TNIKQ9UKE5 1360 aa35.71■■■■□ 3.31
SNRNP70-209ENST00000601065 FBLN2P98095 1184 aa35.69■■■■□ 3.3
SNRNP70-209ENST00000601065 CHD1O14646 1710 aa35.65■■■■□ 3.3
SNRNP70-209ENST00000601065 CTTNBP2Q8WZ74 1663 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms