RNA–Protein interactions for RNA: ENST00000577918.5

KPNB1-205, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-205ENST00000577918 NISCHQ9Y2I1 1504 aa37.14■■■■□ 3.54
KPNB1-205ENST00000577918 CCDC180Q9P1Z9 1646 aa33.3■■■□□ 2.92
KPNB1-205ENST00000577918 ABCC9O60706 1549 aa33.12■■■□□ 2.89
KPNB1-205ENST00000577918 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.66
KPNB1-205ENST00000577918 NACADO15069 1562 aa31.47■■■□□ 2.63
KPNB1-205ENST00000577918 DCAF8L2P0C7V8 631 aa31.26■■■□□ 2.59
KPNB1-205ENST00000577918 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
KPNB1-205ENST00000577918 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
KPNB1-205ENST00000577918 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
KPNB1-205ENST00000577918 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
KPNB1-205ENST00000577918 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
KPNB1-205ENST00000577918 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
KPNB1-205ENST00000577918 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
KPNB1-205ENST00000577918 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
KPNB1-205ENST00000577918 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
KPNB1-205ENST00000577918 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
KPNB1-205ENST00000577918 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
KPNB1-205ENST00000577918 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
KPNB1-205ENST00000577918 NCAPD3P42695 1498 aa29.05■■■□□ 2.24
KPNB1-205ENST00000577918 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.22
KPNB1-205ENST00000577918 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
KPNB1-205ENST00000577918 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
KPNB1-205ENST00000577918 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
KPNB1-205ENST00000577918 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
KPNB1-205ENST00000577918 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
KPNB1-205ENST00000577918 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
KPNB1-205ENST00000577918 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
KPNB1-205ENST00000577918 CUX2O14529 1486 aa28.58■■■□□ 2.17
KPNB1-205ENST00000577918 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
KPNB1-205ENST00000577918 NESP48681 1621 aa28.47■■■□□ 2.15
KPNB1-205ENST00000577918 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
KPNB1-205ENST00000577918 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
KPNB1-205ENST00000577918 PDS5BQ9NTI5 1447 aa28.23■■■□□ 2.11
KPNB1-205ENST00000577918 WIZO95785 1651 aa28.23■■■□□ 2.11
KPNB1-205ENST00000577918 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
KPNB1-205ENST00000577918 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
KPNB1-205ENST00000577918 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
KPNB1-205ENST00000577918 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
KPNB1-205ENST00000577918 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
KPNB1-205ENST00000577918 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
KPNB1-205ENST00000577918 CFTRP13569 1480 aa27.87■■■□□ 2.05
KPNB1-205ENST00000577918 WDR62O43379 1518 aa27.86■■■□□ 2.05
KPNB1-205ENST00000577918 CEP164Q9UPV0 1460 aa27.84■■■□□ 2.05
KPNB1-205ENST00000577918 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
KPNB1-205ENST00000577918 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
KPNB1-205ENST00000577918 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
KPNB1-205ENST00000577918 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
KPNB1-205ENST00000577918 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
KPNB1-205ENST00000577918 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
KPNB1-205ENST00000577918 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
KPNB1-205ENST00000577918 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
KPNB1-205ENST00000577918 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
KPNB1-205ENST00000577918 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
KPNB1-205ENST00000577918 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
KPNB1-205ENST00000577918 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
KPNB1-205ENST00000577918 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
KPNB1-205ENST00000577918 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
KPNB1-205ENST00000577918 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.912e-9■■■■■ 36.4
KPNB1-205ENST00000577918 SOGA1O94964 1423 aa26.92■■□□□ 1.9
KPNB1-205ENST00000577918 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.9
KPNB1-205ENST00000577918 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
KPNB1-205ENST00000577918 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
KPNB1-205ENST00000577918 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
KPNB1-205ENST00000577918 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
KPNB1-205ENST00000577918 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
KPNB1-205ENST00000577918 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
KPNB1-205ENST00000577918 CUX1P39880 1505 aa26.85■■□□□ 1.89
KPNB1-205ENST00000577918 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
KPNB1-205ENST00000577918 CHD1O14646 1710 aa26.82■■□□□ 1.88
KPNB1-205ENST00000577918 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
KPNB1-205ENST00000577918 FBLN2P98095 1184 aa26.78■■□□□ 1.88
KPNB1-205ENST00000577918 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
KPNB1-205ENST00000577918 GRIN2BQ13224 1484 aa26.69■■□□□ 1.86
KPNB1-205ENST00000577918 MAGI1Q96QZ7 1491 aaPredicted RBP26.69■■□□□ 1.86
KPNB1-205ENST00000577918 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
KPNB1-205ENST00000577918 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
KPNB1-205ENST00000577918 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
KPNB1-205ENST00000577918 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
KPNB1-205ENST00000577918 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
KPNB1-205ENST00000577918 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
KPNB1-205ENST00000577918 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
KPNB1-205ENST00000577918 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
KPNB1-205ENST00000577918 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
KPNB1-205ENST00000577918 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
KPNB1-205ENST00000577918 ABCA5Q8WWZ7 1642 aa26.52■■□□□ 1.84
KPNB1-205ENST00000577918 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
KPNB1-205ENST00000577918 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
KPNB1-205ENST00000577918 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
KPNB1-205ENST00000577918 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
KPNB1-205ENST00000577918 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
KPNB1-205ENST00000577918 ERICH3Q5RHP9 1530 aa26.29■■□□□ 1.8
KPNB1-205ENST00000577918 TRHP20396 242 aaPredicted RBP26.28■■□□□ 1.8
KPNB1-205ENST00000577918 NUP160Q12769 1436 aa26.25■■□□□ 1.79
KPNB1-205ENST00000577918 CEP170Q5SW79 1584 aa26.2■■□□□ 1.78
KPNB1-205ENST00000577918 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
KPNB1-205ENST00000577918 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
KPNB1-205ENST00000577918 KIF27Q86VH2 1401 aa26■■□□□ 1.75
KPNB1-205ENST00000577918 JPH4Q96JJ6 628 aa26■■□□□ 1.75
KPNB1-205ENST00000577918 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
KPNB1-205ENST00000577918 IGF1RP08069 1367 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms