RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
PCMT1-209ENST00000494411 CCDC180Q9P1Z9 1646 aa41.64■■■■■ 4.26
PCMT1-209ENST00000494411 ABCC9O60706 1549 aa40.86■■■■■ 4.13
PCMT1-209ENST00000494411 RB1CC1Q8TDY2 1594 aa39.23■■■■□ 3.87
PCMT1-209ENST00000494411 NACADO15069 1562 aa39.13■■■■□ 3.85
PCMT1-209ENST00000494411 DCAF8L2P0C7V8 631 aa39.05■■■■□ 3.84
PCMT1-209ENST00000494411 ZCCHC6Q5VYS8 1495 aaKnown RBP38.9■■■■□ 3.82
PCMT1-209ENST00000494411 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
PCMT1-209ENST00000494411 DCAF1Q9Y4B6 1507 aa38.63■■■■□ 3.77
PCMT1-209ENST00000494411 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PCMT1-209ENST00000494411 PABPN1Q86U42 306 aaKnown RBP eCLIP38.12■■■■□ 3.69
PCMT1-209ENST00000494411 BICRAQ9NZM4 1560 aa38.07■■■■□ 3.69
PCMT1-209ENST00000494411 SCRIBQ14160 1630 aa38■■■■□ 3.67
PCMT1-209ENST00000494411 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
PCMT1-209ENST00000494411 DNAJC5BQ9UF47 199 aa37.59■■■■□ 3.61
PCMT1-209ENST00000494411 EIF4G1Q04637 1599 aaKnown RBP37.08■■■■□ 3.53
PCMT1-209ENST00000494411 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
PCMT1-209ENST00000494411 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
PCMT1-209ENST00000494411 SMARCA4P51532 1647 aa36.31■■■■□ 3.4
PCMT1-209ENST00000494411 BAZ1AQ9NRL2 1556 aaPredicted RBP36.22■■■■□ 3.39
PCMT1-209ENST00000494411 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
PCMT1-209ENST00000494411 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
PCMT1-209ENST00000494411 SMARCA2P51531 1590 aa36.07■■■■□ 3.37
PCMT1-209ENST00000494411 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
PCMT1-209ENST00000494411 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
PCMT1-209ENST00000494411 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
PCMT1-209ENST00000494411 BAZ1BQ9UIG0 1483 aaKnown RBP35.82■■■■□ 3.32
PCMT1-209ENST00000494411 WIZO95785 1651 aa35.65■■■■□ 3.3
PCMT1-209ENST00000494411 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
PCMT1-209ENST00000494411 NESP48681 1621 aa35.32■■■■□ 3.25
PCMT1-209ENST00000494411 TOP2AP11388 1531 aaKnown RBP35.24■■■■□ 3.23
PCMT1-209ENST00000494411 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
PCMT1-209ENST00000494411 LAMC3Q9Y6N6 1575 aa35.2■■■■□ 3.23
PCMT1-209ENST00000494411 CADPSQ9ULU8 1353 aa35.02■■■■□ 3.2
PCMT1-209ENST00000494411 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
PCMT1-209ENST00000494411 PDS5BQ9NTI5 1447 aa34.92■■■■□ 3.18
PCMT1-209ENST00000494411 CUX2O14529 1486 aa34.87■■■■□ 3.17
PCMT1-209ENST00000494411 THOC2Q8NI27 1593 aaKnown RBP34.84■■■■□ 3.17
PCMT1-209ENST00000494411 CFTRP13569 1480 aa34.81■■■■□ 3.16
PCMT1-209ENST00000494411 CCDC88BA6NC98 1476 aa34.8■■■■□ 3.16
PCMT1-209ENST00000494411 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
PCMT1-209ENST00000494411 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
PCMT1-209ENST00000494411 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
PCMT1-209ENST00000494411 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
PCMT1-209ENST00000494411 MRC2Q9UBG0 1479 aa34.61■■■■□ 3.13
PCMT1-209ENST00000494411 WDR62O43379 1518 aa34.52■■■■□ 3.12
PCMT1-209ENST00000494411 SUPT5HO00267 1087 aaKnown RBP34.51■■■■□ 3.12
PCMT1-209ENST00000494411 URB2Q14146 1524 aaKnown RBP34.34■■■■□ 3.09
PCMT1-209ENST00000494411 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
PCMT1-209ENST00000494411 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
PCMT1-209ENST00000494411 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
PCMT1-209ENST00000494411 IFT140Q96RY7 1462 aa33.9■■■■□ 3.02
PCMT1-209ENST00000494411 CUX1P39880 1505 aa33.8■■■■□ 3
PCMT1-209ENST00000494411 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
PCMT1-209ENST00000494411 ZNF608Q9ULD9 1512 aaPredicted RBP33.79■■■■□ 3
PCMT1-209ENST00000494411 TARBP1Q13395 1621 aaKnown RBP33.76■■■■□ 3
PCMT1-209ENST00000494411 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
PCMT1-209ENST00000494411 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
PCMT1-209ENST00000494411 RAD54L2Q9Y4B4 1467 aa33.66■■■□□ 2.98
PCMT1-209ENST00000494411 SOGA1O94964 1423 aa33.62■■■□□ 2.97
PCMT1-209ENST00000494411 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.961e-7■■■■■ 30.9
PCMT1-209ENST00000494411 WRNQ14191 1432 aaPredicted RBP eCLIP33.5■■■□□ 2.95
PCMT1-209ENST00000494411 BIVM-ERCC5R4GMW8 1640 aa33.49■■■□□ 2.95
PCMT1-209ENST00000494411 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
PCMT1-209ENST00000494411 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
PCMT1-209ENST00000494411 TOP2BQ02880 1626 aa33.47■■■□□ 2.95
PCMT1-209ENST00000494411 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
PCMT1-209ENST00000494411 OSCARQ8IYS5 282 aa33.36■■■□□ 2.93
PCMT1-209ENST00000494411 ABCA10Q8WWZ4 1543 aa33.35■■■□□ 2.93
PCMT1-209ENST00000494411 CHD1O14646 1710 aa33.31■■■□□ 2.92
PCMT1-209ENST00000494411 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
PCMT1-209ENST00000494411 PBRM1Q86U86 1689 aa33.26■■■□□ 2.92
PCMT1-209ENST00000494411 GRIN2BQ13224 1484 aa33.26■■■□□ 2.92
PCMT1-209ENST00000494411 SNAPC4Q5SXM2 1469 aa33.26■■■□□ 2.92
PCMT1-209ENST00000494411 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
PCMT1-209ENST00000494411 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
PCMT1-209ENST00000494411 TRIM41Q8WV44 630 aa33.17■■■□□ 2.9
PCMT1-209ENST00000494411 FBLN2P98095 1184 aa33.16■■■□□ 2.9
PCMT1-209ENST00000494411 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
PCMT1-209ENST00000494411 CHMP7Q8WUX9 453 aaPredicted RBP33.03■■■□□ 2.88
PCMT1-209ENST00000494411 ADAMTS12P58397 1594 aa32.97■■■□□ 2.87
PCMT1-209ENST00000494411 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
PCMT1-209ENST00000494411 RIMBP3CA6NJZ7 1639 aa32.94■■■□□ 2.86
PCMT1-209ENST00000494411 RIMBP3BA6NNM3 1639 aa32.94■■■□□ 2.86
PCMT1-209ENST00000494411 RIMBP3Q9UFD9 1639 aa32.94■■■□□ 2.86
PCMT1-209ENST00000494411 CLASP1Q7Z460 1538 aa32.9■■■□□ 2.86
PCMT1-209ENST00000494411 ARHGEF11O15085 1522 aa32.89■■■□□ 2.86
PCMT1-209ENST00000494411 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
PCMT1-209ENST00000494411 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
PCMT1-209ENST00000494411 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
PCMT1-209ENST00000494411 CEP170Q5SW79 1584 aa32.73■■■□□ 2.83
PCMT1-209ENST00000494411 NUP160Q12769 1436 aa32.69■■■□□ 2.82
PCMT1-209ENST00000494411 IGF1RP08069 1367 aa32.67■■■□□ 2.82
PCMT1-209ENST00000494411 CUL7Q14999 1698 aa32.66■■■□□ 2.82
PCMT1-209ENST00000494411 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
PCMT1-209ENST00000494411 CYB5RLQ6IPT4 315 aa32.55■■■□□ 2.8
PCMT1-209ENST00000494411 SHROOM2Q13796 1616 aa32.51■■■□□ 2.79
PCMT1-209ENST00000494411 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
PCMT1-209ENST00000494411 CARMIL1Q5VZK9 1371 aa32.47■■■□□ 2.79
PCMT1-209ENST00000494411 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms