RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
SNRNP70-202ENST00000401730 SHROOM4Q9ULL8 1493 aa30.4■■■□□ 2.46
SNRNP70-202ENST00000401730 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
SNRNP70-202ENST00000401730 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
SNRNP70-202ENST00000401730 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
SNRNP70-202ENST00000401730 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
SNRNP70-202ENST00000401730 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
SNRNP70-202ENST00000401730 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
SNRNP70-202ENST00000401730 PCGF6Q9BYE7 350 aa28.26■■■□□ 2.11
SNRNP70-202ENST00000401730 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
SNRNP70-202ENST00000401730 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
SNRNP70-202ENST00000401730 HRCP23327 699 aa27.92■■■□□ 2.06
SNRNP70-202ENST00000401730 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
SNRNP70-202ENST00000401730 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
SNRNP70-202ENST00000401730 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
SNRNP70-202ENST00000401730 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
SNRNP70-202ENST00000401730 TRIM41Q8WV44 630 aa27.53■■■□□ 2
SNRNP70-202ENST00000401730 ABCC9O60706 1549 aa27.48■■□□□ 1.99
SNRNP70-202ENST00000401730 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
SNRNP70-202ENST00000401730 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
SNRNP70-202ENST00000401730 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
SNRNP70-202ENST00000401730 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
SNRNP70-202ENST00000401730 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
SNRNP70-202ENST00000401730 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
SNRNP70-202ENST00000401730 WIZO95785 1651 aa26.77■■□□□ 1.88
SNRNP70-202ENST00000401730 NACADO15069 1562 aa26.71■■□□□ 1.87
SNRNP70-202ENST00000401730 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.862e-12■■■■□ 21.8
SNRNP70-202ENST00000401730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
SNRNP70-202ENST00000401730 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
SNRNP70-202ENST00000401730 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
SNRNP70-202ENST00000401730 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
SNRNP70-202ENST00000401730 UBTFP17480 764 aaKnown RBP26.37■■□□□ 1.81
SNRNP70-202ENST00000401730 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
SNRNP70-202ENST00000401730 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
SNRNP70-202ENST00000401730 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
SNRNP70-202ENST00000401730 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SNRNP70-202ENST00000401730 RUSC2Q8N2Y8 1516 aa26.16■■□□□ 1.78
SNRNP70-202ENST00000401730 SCAF1Q9H7N4 1312 aaKnown RBP26.14■■□□□ 1.77
SNRNP70-202ENST00000401730 PELP1Q8IZL8 1130 aaKnown RBP26.13■■□□□ 1.77
SNRNP70-202ENST00000401730 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SNRNP70-202ENST00000401730 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
SNRNP70-202ENST00000401730 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
SNRNP70-202ENST00000401730 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
SNRNP70-202ENST00000401730 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
SNRNP70-202ENST00000401730 EIF4G1Q04637 1599 aaKnown RBP26.02■■□□□ 1.76
SNRNP70-202ENST00000401730 HNRNPUL2Q1KMD3 747 aaKnown RBP25.97■■□□□ 1.75
SNRNP70-202ENST00000401730 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SNRNP70-202ENST00000401730 DIEXFQ68CQ4 756 aaKnown RBP25.83■■□□□ 1.73
SNRNP70-202ENST00000401730 TNIKQ9UKE5 1360 aa25.83■■□□□ 1.73
SNRNP70-202ENST00000401730 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.729e-10■■□□□ 11.7
SNRNP70-202ENST00000401730 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
SNRNP70-202ENST00000401730 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
SNRNP70-202ENST00000401730 APLP2Q06481 763 aa25.68■■□□□ 1.7
SNRNP70-202ENST00000401730 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
SNRNP70-202ENST00000401730 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
SNRNP70-202ENST00000401730 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
SNRNP70-202ENST00000401730 EEA1Q15075 1411 aa25.58■■□□□ 1.69
SNRNP70-202ENST00000401730 CLIP1P30622 1438 aa25.57■■□□□ 1.68
SNRNP70-202ENST00000401730 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
SNRNP70-202ENST00000401730 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
SNRNP70-202ENST00000401730 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
SNRNP70-202ENST00000401730 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
SNRNP70-202ENST00000401730 GTF3C3Q9Y5Q9 886 aa25.5■■□□□ 1.67
SNRNP70-202ENST00000401730 ZNF316A6NFI3 1004 aaPredicted RBP25.48■■□□□ 1.67
SNRNP70-202ENST00000401730 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
SNRNP70-202ENST00000401730 ITGAEP38570 1179 aa25.41■■□□□ 1.66
SNRNP70-202ENST00000401730 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.66
SNRNP70-202ENST00000401730 MIER1Q8N108 512 aa25.34■■□□□ 1.65
SNRNP70-202ENST00000401730 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
SNRNP70-202ENST00000401730 VPS8Q8N3P4 1428 aa25.31■■□□□ 1.64
SNRNP70-202ENST00000401730 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
SNRNP70-202ENST00000401730 KIF21BO75037 1637 aa25.18■■□□□ 1.62
SNRNP70-202ENST00000401730 ATP1B4Q9UN42 357 aaPredicted RBP25.17■■□□□ 1.62
SNRNP70-202ENST00000401730 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
SNRNP70-202ENST00000401730 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SNRNP70-202ENST00000401730 ARAP1Q96P48 1450 aa25■■□□□ 1.59
SNRNP70-202ENST00000401730 CUX1P39880 1505 aa24.99■■□□□ 1.59
SNRNP70-202ENST00000401730 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
SNRNP70-202ENST00000401730 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
SNRNP70-202ENST00000401730 MYT1Q01538 1121 aa24.94■■□□□ 1.58
SNRNP70-202ENST00000401730 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
SNRNP70-202ENST00000401730 FAM50AQ14320 339 aaKnown RBP24.89■■□□□ 1.57
SNRNP70-202ENST00000401730 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
SNRNP70-202ENST00000401730 CUX2O14529 1486 aa24.86■■□□□ 1.57
SNRNP70-202ENST00000401730 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
SNRNP70-202ENST00000401730 ARHGAP35Q9NRY4 1499 aa24.79■■□□□ 1.56
SNRNP70-202ENST00000401730 CFTRP13569 1480 aa24.78■■□□□ 1.56
SNRNP70-202ENST00000401730 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
SNRNP70-202ENST00000401730 IGF1RP08069 1367 aa24.77■■□□□ 1.56
SNRNP70-202ENST00000401730 HIRIP3Q9BW71 556 aaPredicted RBP24.75■■□□□ 1.55
SNRNP70-202ENST00000401730 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
SNRNP70-202ENST00000401730 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
SNRNP70-202ENST00000401730 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
SNRNP70-202ENST00000401730 KCNH8Q96L42 1107 aa24.7■■□□□ 1.54
SNRNP70-202ENST00000401730 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SNRNP70-202ENST00000401730 RAB3GAP2Q9H2M9 1393 aa24.66■■□□□ 1.54
SNRNP70-202ENST00000401730 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
SNRNP70-202ENST00000401730 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
SNRNP70-202ENST00000401730 RRBP1Q9P2E9 1410 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-202ENST00000401730 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms