RNA–Protein interactions for RNA: ENST00000541893.5

TMEM258-206, Transcript of transmembrane protein 258, humanhuman

TSL 5

Gene TMEM258, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-206ENST00000541893 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
TMEM258-206ENST00000541893 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
TMEM258-206ENST00000541893 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
TMEM258-206ENST00000541893 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
TMEM258-206ENST00000541893 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
TMEM258-206ENST00000541893 FOXD1Q16676 465 aa12.94□□□□□ -0.34
TMEM258-206ENST00000541893 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
TMEM258-206ENST00000541893 ADRA2BP18089 450 aa12.42□□□□□ -0.42
TMEM258-206ENST00000541893 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
TMEM258-206ENST00000541893 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
TMEM258-206ENST00000541893 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
TMEM258-206ENST00000541893 MSH5O43196 834 aa11.96□□□□□ -0.49
TMEM258-206ENST00000541893 KCNA4P22459 653 aa11.84□□□□□ -0.51
TMEM258-206ENST00000541893 ABCC9O60706 1549 aa11.65□□□□□ -0.54
TMEM258-206ENST00000541893 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
TMEM258-206ENST00000541893 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
TMEM258-206ENST00000541893 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
TMEM258-206ENST00000541893 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
TMEM258-206ENST00000541893 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
TMEM258-206ENST00000541893 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
TMEM258-206ENST00000541893 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
TMEM258-206ENST00000541893 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
TMEM258-206ENST00000541893 AMER1Q5JTC6 1135 aaPredicted RBP11.13□□□□□ -0.63
TMEM258-206ENST00000541893 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
TMEM258-206ENST00000541893 DMRT2Q9Y5R5 561 aa11.12□□□□□ -0.63
TMEM258-206ENST00000541893 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
TMEM258-206ENST00000541893 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
TMEM258-206ENST00000541893 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
TMEM258-206ENST00000541893 NACADO15069 1562 aa10.99□□□□□ -0.65
TMEM258-206ENST00000541893 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
TMEM258-206ENST00000541893 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
TMEM258-206ENST00000541893 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
TMEM258-206ENST00000541893 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
TMEM258-206ENST00000541893 ZBTB22O15209 634 aa10.89□□□□□ -0.67
TMEM258-206ENST00000541893 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
TMEM258-206ENST00000541893 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
TMEM258-206ENST00000541893 MYO15BQ96JP2 1530 aa10.81□□□□□ -0.68
TMEM258-206ENST00000541893 UNC13AQ9UPW8 1703 aa10.77□□□□□ -0.69
TMEM258-206ENST00000541893 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
TMEM258-206ENST00000541893 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
TMEM258-206ENST00000541893 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
TMEM258-206ENST00000541893 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
TMEM258-206ENST00000541893 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
TMEM258-206ENST00000541893 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
TMEM258-206ENST00000541893 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
TMEM258-206ENST00000541893 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
TMEM258-206ENST00000541893 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
TMEM258-206ENST00000541893 EIF4G1Q04637 1599 aaKnown RBP10.48□□□□□ -0.73
TMEM258-206ENST00000541893 FKBP8Q14318 412 aa10.43□□□□□ -0.74
TMEM258-206ENST00000541893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.4□□□□□ -0.74
TMEM258-206ENST00000541893 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
TMEM258-206ENST00000541893 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
TMEM258-206ENST00000541893 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
TMEM258-206ENST00000541893 RNF39Q9H2S5 420 aa10.23□□□□□ -0.77
TMEM258-206ENST00000541893 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
TMEM258-206ENST00000541893 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
TMEM258-206ENST00000541893 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
TMEM258-206ENST00000541893 CUX2O14529 1486 aa10.15□□□□□ -0.78
TMEM258-206ENST00000541893 BCANQ96GW7 911 aa10.14□□□□□ -0.79
TMEM258-206ENST00000541893 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
TMEM258-206ENST00000541893 ERCC6Q03468 1493 aa10.12□□□□□ -0.79
TMEM258-206ENST00000541893 C1QBPQ07021 282 aaKnown RBP10.11□□□□□ -0.79
TMEM258-206ENST00000541893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.08□□□□□ -0.8
TMEM258-206ENST00000541893 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
TMEM258-206ENST00000541893 SMARCA2P51531 1590 aa10.06□□□□□ -0.8
TMEM258-206ENST00000541893 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
TMEM258-206ENST00000541893 HMGXB3Q12766 1538 aa10.04□□□□□ -0.8
TMEM258-206ENST00000541893 SAMD1Q6SPF0 538 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-206ENST00000541893 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
TMEM258-206ENST00000541893 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
TMEM258-206ENST00000541893 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
TMEM258-206ENST00000541893 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
TMEM258-206ENST00000541893 PRKCSHP14314 528 aaPredicted RBP10.01□□□□□ -0.81
TMEM258-206ENST00000541893 APLP2Q06481 763 aa9.99□□□□□ -0.81
TMEM258-206ENST00000541893 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
TMEM258-206ENST00000541893 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
TMEM258-206ENST00000541893 NESP48681 1621 aa9.96□□□□□ -0.82
TMEM258-206ENST00000541893 PEG3Q9GZU2 1588 aa9.93□□□□□ -0.82
TMEM258-206ENST00000541893 LAMC3Q9Y6N6 1575 aa9.93□□□□□ -0.82
TMEM258-206ENST00000541893 SPINK5Q9NQ38 1064 aaPredicted RBP9.93□□□□□ -0.82
TMEM258-206ENST00000541893 CAPN15O75808 1086 aa9.92□□□□□ -0.82
TMEM258-206ENST00000541893 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
TMEM258-206ENST00000541893 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.83
TMEM258-206ENST00000541893 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
TMEM258-206ENST00000541893 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
TMEM258-206ENST00000541893 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
TMEM258-206ENST00000541893 ZNF219Q9P2Y4 722 aaPredicted RBP9.86□□□□□ -0.83
TMEM258-206ENST00000541893 ATF5Q9Y2D1 282 aaPredicted RBP9.86□□□□□ -0.83
TMEM258-206ENST00000541893 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
TMEM258-206ENST00000541893 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
TMEM258-206ENST00000541893 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
TMEM258-206ENST00000541893 CADPSQ9ULU8 1353 aa9.82□□□□□ -0.84
TMEM258-206ENST00000541893 MRC2Q9UBG0 1479 aa9.79□□□□□ -0.84
TMEM258-206ENST00000541893 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
TMEM258-206ENST00000541893 WDR62O43379 1518 aa9.75□□□□□ -0.85
TMEM258-206ENST00000541893 ABCB7O75027 752 aa9.73□□□□□ -0.85
TMEM258-206ENST00000541893 DSG3P32926 999 aa9.73□□□□□ -0.85
TMEM258-206ENST00000541893 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
TMEM258-206ENST00000541893 WIZO95785 1651 aa9.72□□□□□ -0.85
TMEM258-206ENST00000541893 FANCD2Q9BXW9 1451 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms