RNA–Protein interactions for RNA: ENST00000525782.5

EIF3M-205, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-205ENST00000525782 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
EIF3M-205ENST00000525782 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
EIF3M-205ENST00000525782 ABCC9O60706 1549 aa23.73■■□□□ 1.39
EIF3M-205ENST00000525782 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
EIF3M-205ENST00000525782 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
EIF3M-205ENST00000525782 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
EIF3M-205ENST00000525782 NACADO15069 1562 aa23.09■■□□□ 1.29
EIF3M-205ENST00000525782 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
EIF3M-205ENST00000525782 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
EIF3M-205ENST00000525782 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
EIF3M-205ENST00000525782 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
EIF3M-205ENST00000525782 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
EIF3M-205ENST00000525782 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
EIF3M-205ENST00000525782 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
EIF3M-205ENST00000525782 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
EIF3M-205ENST00000525782 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
EIF3M-205ENST00000525782 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
EIF3M-205ENST00000525782 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
EIF3M-205ENST00000525782 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
EIF3M-205ENST00000525782 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
EIF3M-205ENST00000525782 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
EIF3M-205ENST00000525782 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
EIF3M-205ENST00000525782 WIZO95785 1651 aa21.38■■□□□ 1.01
EIF3M-205ENST00000525782 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
EIF3M-205ENST00000525782 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
EIF3M-205ENST00000525782 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
EIF3M-205ENST00000525782 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
EIF3M-205ENST00000525782 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
EIF3M-205ENST00000525782 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
EIF3M-205ENST00000525782 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
EIF3M-205ENST00000525782 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
EIF3M-205ENST00000525782 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
EIF3M-205ENST00000525782 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
EIF3M-205ENST00000525782 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
EIF3M-205ENST00000525782 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
EIF3M-205ENST00000525782 NESP48681 1621 aa20.66■□□□□ 0.9
EIF3M-205ENST00000525782 CFTRP13569 1480 aa20.64■□□□□ 0.89
EIF3M-205ENST00000525782 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
EIF3M-205ENST00000525782 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
EIF3M-205ENST00000525782 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
EIF3M-205ENST00000525782 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
EIF3M-205ENST00000525782 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
EIF3M-205ENST00000525782 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
EIF3M-205ENST00000525782 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
EIF3M-205ENST00000525782 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
EIF3M-205ENST00000525782 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
EIF3M-205ENST00000525782 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
EIF3M-205ENST00000525782 WDR62O43379 1518 aa20.21■□□□□ 0.83
EIF3M-205ENST00000525782 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
EIF3M-205ENST00000525782 CUX1P39880 1505 aa20.18■□□□□ 0.82
EIF3M-205ENST00000525782 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
EIF3M-205ENST00000525782 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
EIF3M-205ENST00000525782 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
EIF3M-205ENST00000525782 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
EIF3M-205ENST00000525782 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
EIF3M-205ENST00000525782 CUX2O14529 1486 aa20.05■□□□□ 0.8
EIF3M-205ENST00000525782 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
EIF3M-205ENST00000525782 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
EIF3M-205ENST00000525782 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
EIF3M-205ENST00000525782 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
EIF3M-205ENST00000525782 SOGA1O94964 1423 aa19.94■□□□□ 0.78
EIF3M-205ENST00000525782 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
EIF3M-205ENST00000525782 IFT140Q96RY7 1462 aa19.94■□□□□ 0.78
EIF3M-205ENST00000525782 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
EIF3M-205ENST00000525782 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
EIF3M-205ENST00000525782 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
EIF3M-205ENST00000525782 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
EIF3M-205ENST00000525782 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
EIF3M-205ENST00000525782 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
EIF3M-205ENST00000525782 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
EIF3M-205ENST00000525782 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■□□ 17.5
EIF3M-205ENST00000525782 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
EIF3M-205ENST00000525782 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
EIF3M-205ENST00000525782 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
EIF3M-205ENST00000525782 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
EIF3M-205ENST00000525782 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
EIF3M-205ENST00000525782 EEA1Q15075 1411 aa19.63■□□□□ 0.73
EIF3M-205ENST00000525782 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
EIF3M-205ENST00000525782 CUL7Q14999 1698 aa19.59■□□□□ 0.73
EIF3M-205ENST00000525782 IGF1RP08069 1367 aa19.58■□□□□ 0.73
EIF3M-205ENST00000525782 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.73
EIF3M-205ENST00000525782 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
EIF3M-205ENST00000525782 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
EIF3M-205ENST00000525782 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
EIF3M-205ENST00000525782 CHD1O14646 1710 aa19.53■□□□□ 0.72
EIF3M-205ENST00000525782 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
EIF3M-205ENST00000525782 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
EIF3M-205ENST00000525782 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
EIF3M-205ENST00000525782 PRXQ9BXM0 1461 aa19.45■□□□□ 0.7
EIF3M-205ENST00000525782 FBLN2P98095 1184 aa19.44■□□□□ 0.7
EIF3M-205ENST00000525782 KIF21BO75037 1637 aa19.44■□□□□ 0.7
EIF3M-205ENST00000525782 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
EIF3M-205ENST00000525782 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
EIF3M-205ENST00000525782 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
EIF3M-205ENST00000525782 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
EIF3M-205ENST00000525782 GOLGA3Q08378 1498 aa19.33■□□□□ 0.69
EIF3M-205ENST00000525782 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
EIF3M-205ENST00000525782 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
EIF3M-205ENST00000525782 NUP160Q12769 1436 aa19.3■□□□□ 0.68
EIF3M-205ENST00000525782 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms