RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 NISCHQ9Y2I1 1504 aa41.44■■■■■ 4.23
SPTAN1-217ENST00000629089 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
SPTAN1-217ENST00000629089 ABCC9O60706 1549 aa35.12■■■■□ 3.21
SPTAN1-217ENST00000629089 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
SPTAN1-217ENST00000629089 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
SPTAN1-217ENST00000629089 DCAF1Q9Y4B6 1507 aa34.29■■■■□ 3.08
SPTAN1-217ENST00000629089 NACADO15069 1562 aa34.17■■■■□ 3.06
SPTAN1-217ENST00000629089 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
SPTAN1-217ENST00000629089 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
SPTAN1-217ENST00000629089 SCRIBQ14160 1630 aa33.45■■■□□ 2.95
SPTAN1-217ENST00000629089 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
SPTAN1-217ENST00000629089 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
SPTAN1-217ENST00000629089 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
SPTAN1-217ENST00000629089 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
SPTAN1-217ENST00000629089 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
SPTAN1-217ENST00000629089 BAZ1AQ9NRL2 1556 aaPredicted RBP32.09■■■□□ 2.73
SPTAN1-217ENST00000629089 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.73
SPTAN1-217ENST00000629089 SMARCA4P51532 1647 aa32.03■■■□□ 2.72
SPTAN1-217ENST00000629089 MROH2BQ7Z745 1585 aa31.97■■■□□ 2.71
SPTAN1-217ENST00000629089 RSF1Q96T23 1441 aaPredicted RBP31.85■■■□□ 2.69
SPTAN1-217ENST00000629089 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
SPTAN1-217ENST00000629089 WIZO95785 1651 aa31.69■■■□□ 2.66
SPTAN1-217ENST00000629089 SUPT5HO00267 1087 aaKnown RBP31.68■■■□□ 2.66
SPTAN1-217ENST00000629089 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
SPTAN1-217ENST00000629089 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
SPTAN1-217ENST00000629089 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
SPTAN1-217ENST00000629089 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
SPTAN1-217ENST00000629089 NCAPD3P42695 1498 aa31.51■■■□□ 2.63
SPTAN1-217ENST00000629089 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
SPTAN1-217ENST00000629089 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
SPTAN1-217ENST00000629089 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
SPTAN1-217ENST00000629089 CCDC88BA6NC98 1476 aa31■■■□□ 2.55
SPTAN1-217ENST00000629089 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
SPTAN1-217ENST00000629089 CFTRP13569 1480 aa30.61■■■□□ 2.49
SPTAN1-217ENST00000629089 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
SPTAN1-217ENST00000629089 NESP48681 1621 aa30.59■■■□□ 2.49
SPTAN1-217ENST00000629089 PRDM2Q13029 1718 aa30.47■■■□□ 2.47
SPTAN1-217ENST00000629089 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
SPTAN1-217ENST00000629089 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
SPTAN1-217ENST00000629089 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
SPTAN1-217ENST00000629089 ERCC6Q03468 1493 aa30.24■■■□□ 2.43
SPTAN1-217ENST00000629089 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
SPTAN1-217ENST00000629089 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
SPTAN1-217ENST00000629089 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
SPTAN1-217ENST00000629089 MRC2Q9UBG0 1479 aa30.02■■■□□ 2.4
SPTAN1-217ENST00000629089 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
SPTAN1-217ENST00000629089 CUX1P39880 1505 aa29.95■■■□□ 2.38
SPTAN1-217ENST00000629089 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
SPTAN1-217ENST00000629089 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
SPTAN1-217ENST00000629089 CHIC1Q5VXU3 224 aa29.92■■■□□ 2.38
SPTAN1-217ENST00000629089 SYNJ1O43426 1573 aa29.92■■■□□ 2.38
SPTAN1-217ENST00000629089 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
SPTAN1-217ENST00000629089 WDR62O43379 1518 aa29.88■■■□□ 2.37
SPTAN1-217ENST00000629089 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
SPTAN1-217ENST00000629089 TRIM41Q8WV44 630 aa29.87■■■□□ 2.37
SPTAN1-217ENST00000629089 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
SPTAN1-217ENST00000629089 FGD5Q6ZNL6 1462 aa29.75■■■□□ 2.35
SPTAN1-217ENST00000629089 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.35
SPTAN1-217ENST00000629089 SOGA1O94964 1423 aa29.62■■■□□ 2.33
SPTAN1-217ENST00000629089 CUX2O14529 1486 aa29.59■■■□□ 2.33
SPTAN1-217ENST00000629089 RAD54L2Q9Y4B4 1467 aa29.59■■■□□ 2.33
SPTAN1-217ENST00000629089 IFT140Q96RY7 1462 aa29.54■■■□□ 2.32
SPTAN1-217ENST00000629089 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.32
SPTAN1-217ENST00000629089 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
SPTAN1-217ENST00000629089 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
SPTAN1-217ENST00000629089 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
SPTAN1-217ENST00000629089 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
SPTAN1-217ENST00000629089 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
SPTAN1-217ENST00000629089 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
SPTAN1-217ENST00000629089 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.285e-10■■■■■ 39.2
SPTAN1-217ENST00000629089 ABCA5Q8WWZ7 1642 aa29.3■■■□□ 2.28
SPTAN1-217ENST00000629089 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
SPTAN1-217ENST00000629089 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
SPTAN1-217ENST00000629089 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
SPTAN1-217ENST00000629089 EEA1Q15075 1411 aa29.26■■■□□ 2.27
SPTAN1-217ENST00000629089 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
SPTAN1-217ENST00000629089 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
SPTAN1-217ENST00000629089 CSRNP3Q8WYN3 585 aa29.14■■■□□ 2.25
SPTAN1-217ENST00000629089 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
SPTAN1-217ENST00000629089 IGF1RP08069 1367 aa29.12■■■□□ 2.25
SPTAN1-217ENST00000629089 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
SPTAN1-217ENST00000629089 CUL7Q14999 1698 aa29.03■■■□□ 2.24
SPTAN1-217ENST00000629089 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
SPTAN1-217ENST00000629089 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
SPTAN1-217ENST00000629089 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
SPTAN1-217ENST00000629089 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
SPTAN1-217ENST00000629089 PRXQ9BXM0 1461 aa28.94■■■□□ 2.22
SPTAN1-217ENST00000629089 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
SPTAN1-217ENST00000629089 KIF21BO75037 1637 aa28.9■■■□□ 2.22
SPTAN1-217ENST00000629089 SYNJ2O15056 1496 aa28.89■■■□□ 2.22
SPTAN1-217ENST00000629089 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.21
SPTAN1-217ENST00000629089 FBLN2P98095 1184 aa28.88■■■□□ 2.21
SPTAN1-217ENST00000629089 CHMP7Q8WUX9 453 aaPredicted RBP28.88■■■□□ 2.21
SPTAN1-217ENST00000629089 GOLGA3Q08378 1498 aa28.81■■■□□ 2.2
SPTAN1-217ENST00000629089 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
SPTAN1-217ENST00000629089 CHD1O14646 1710 aa28.79■■■□□ 2.2
SPTAN1-217ENST00000629089 LOC105371045A0A1W2PR82 267 aa28.74■■■□□ 2.19
SPTAN1-217ENST00000629089 UBTFP17480 764 aaKnown RBP28.73■■■□□ 2.19
SPTAN1-217ENST00000629089 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
SPTAN1-217ENST00000629089 NUP160Q12769 1436 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms