RNA–Protein interactions for RNA: ENST00000261531.11

SNW1-201, Transcript of SNW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNW1, Length 2,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-201ENST00000261531 NISCHQ9Y2I1 1504 aa21.53■■□□□ 1.04
SNW1-201ENST00000261531 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
SNW1-201ENST00000261531 ABCC9O60706 1549 aa18.62■□□□□ 0.57
SNW1-201ENST00000261531 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
SNW1-201ENST00000261531 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
SNW1-201ENST00000261531 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
SNW1-201ENST00000261531 NACADO15069 1562 aa17.91■□□□□ 0.46
SNW1-201ENST00000261531 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SNW1-201ENST00000261531 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
SNW1-201ENST00000261531 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
SNW1-201ENST00000261531 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNW1-201ENST00000261531 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
SNW1-201ENST00000261531 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
SNW1-201ENST00000261531 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
SNW1-201ENST00000261531 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
SNW1-201ENST00000261531 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
SNW1-201ENST00000261531 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
SNW1-201ENST00000261531 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
SNW1-201ENST00000261531 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
SNW1-201ENST00000261531 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
SNW1-201ENST00000261531 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
SNW1-201ENST00000261531 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
SNW1-201ENST00000261531 SMARCA2P51531 1590 aa16.54■□□□□ 0.24
SNW1-201ENST00000261531 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
SNW1-201ENST00000261531 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
SNW1-201ENST00000261531 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
SNW1-201ENST00000261531 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
SNW1-201ENST00000261531 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SNW1-201ENST00000261531 WIZO95785 1651 aa16.43■□□□□ 0.22
SNW1-201ENST00000261531 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
SNW1-201ENST00000261531 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SNW1-201ENST00000261531 NESP48681 1621 aa16.14■□□□□ 0.17
SNW1-201ENST00000261531 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.17
SNW1-201ENST00000261531 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
SNW1-201ENST00000261531 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
SNW1-201ENST00000261531 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
SNW1-201ENST00000261531 CFTRP13569 1480 aa16■□□□□ 0.15
SNW1-201ENST00000261531 PDS5BQ9NTI5 1447 aa15.99■□□□□ 0.15
SNW1-201ENST00000261531 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
SNW1-201ENST00000261531 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
SNW1-201ENST00000261531 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
SNW1-201ENST00000261531 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
SNW1-201ENST00000261531 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
SNW1-201ENST00000261531 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
SNW1-201ENST00000261531 CUX2O14529 1486 aa15.79■□□□□ 0.12
SNW1-201ENST00000261531 WDR62O43379 1518 aa15.74■□□□□ 0.11
SNW1-201ENST00000261531 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
SNW1-201ENST00000261531 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
SNW1-201ENST00000261531 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
SNW1-201ENST00000261531 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
SNW1-201ENST00000261531 CUX1P39880 1505 aa15.56■□□□□ 0.08
SNW1-201ENST00000261531 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
SNW1-201ENST00000261531 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
SNW1-201ENST00000261531 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
SNW1-201ENST00000261531 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
SNW1-201ENST00000261531 SOGA1O94964 1423 aa15.48■□□□□ 0.07
SNW1-201ENST00000261531 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
SNW1-201ENST00000261531 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.07
SNW1-201ENST00000261531 SYNJ1O43426 1573 aa15.46■□□□□ 0.06
SNW1-201ENST00000261531 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
SNW1-201ENST00000261531 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
SNW1-201ENST00000261531 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
SNW1-201ENST00000261531 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
SNW1-201ENST00000261531 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.051e-6■■■■□ 20.4
SNW1-201ENST00000261531 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
SNW1-201ENST00000261531 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
SNW1-201ENST00000261531 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
SNW1-201ENST00000261531 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
SNW1-201ENST00000261531 GRIN2BQ13224 1484 aa15.27■□□□□ 0.03
SNW1-201ENST00000261531 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
SNW1-201ENST00000261531 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
SNW1-201ENST00000261531 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
SNW1-201ENST00000261531 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
SNW1-201ENST00000261531 FBLN2P98095 1184 aa15.24■□□□□ 0.03
SNW1-201ENST00000261531 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
SNW1-201ENST00000261531 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
SNW1-201ENST00000261531 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
SNW1-201ENST00000261531 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
SNW1-201ENST00000261531 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
SNW1-201ENST00000261531 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
SNW1-201ENST00000261531 CHD1O14646 1710 aa15.16■□□□□ 0.02
SNW1-201ENST00000261531 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
SNW1-201ENST00000261531 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
SNW1-201ENST00000261531 IGF1RP08069 1367 aa15.12■□□□□ 0.01
SNW1-201ENST00000261531 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
SNW1-201ENST00000261531 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
SNW1-201ENST00000261531 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
SNW1-201ENST00000261531 GRIN2AQ12879 1464 aa15.06■□□□□ 0
SNW1-201ENST00000261531 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
SNW1-201ENST00000261531 CUL7Q14999 1698 aa15.03■□□□□ -0
SNW1-201ENST00000261531 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
SNW1-201ENST00000261531 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
SNW1-201ENST00000261531 NUP160Q12769 1436 aa14.99□□□□□ -0.01
SNW1-201ENST00000261531 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
SNW1-201ENST00000261531 FAM9AQ8IZU1 332 aaPredicted RBP14.97□□□□□ -0.01
SNW1-201ENST00000261531 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
SNW1-201ENST00000261531 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
SNW1-201ENST00000261531 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
SNW1-201ENST00000261531 EEA1Q15075 1411 aa14.93□□□□□ -0.02
SNW1-201ENST00000261531 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms