RNA–Protein interactions for RNA: ENST00000216122.8

MCM5-201, Transcript of minichromosome maintenance complex component 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM5, Length 3,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM5-201ENST00000216122 NISCHQ9Y2I1 1504 aa19.96■□□□□ 0.79
MCM5-201ENST00000216122 HRCP23327 699 aa18■□□□□ 0.47
MCM5-201ENST00000216122 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
MCM5-201ENST00000216122 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
MCM5-201ENST00000216122 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
MCM5-201ENST00000216122 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
MCM5-201ENST00000216122 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
MCM5-201ENST00000216122 MYT1Q01538 1121 aa17.23■□□□□ 0.35
MCM5-201ENST00000216122 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
MCM5-201ENST00000216122 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
MCM5-201ENST00000216122 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
MCM5-201ENST00000216122 ABCC9O60706 1549 aa17.11■□□□□ 0.33
MCM5-201ENST00000216122 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.32
MCM5-201ENST00000216122 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
MCM5-201ENST00000216122 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
MCM5-201ENST00000216122 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
MCM5-201ENST00000216122 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
MCM5-201ENST00000216122 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
MCM5-201ENST00000216122 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
MCM5-201ENST00000216122 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
MCM5-201ENST00000216122 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
MCM5-201ENST00000216122 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
MCM5-201ENST00000216122 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCM5-201ENST00000216122 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
MCM5-201ENST00000216122 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
MCM5-201ENST00000216122 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
MCM5-201ENST00000216122 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
MCM5-201ENST00000216122 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
MCM5-201ENST00000216122 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
MCM5-201ENST00000216122 YTHDC1Q96MU7 727 aaKnown RBP16.17■□□□□ 0.18
MCM5-201ENST00000216122 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
MCM5-201ENST00000216122 NACADO15069 1562 aa16.15■□□□□ 0.18
MCM5-201ENST00000216122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
MCM5-201ENST00000216122 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
MCM5-201ENST00000216122 ANP32EQ9BTT0 268 aa15.99■□□□□ 0.15
MCM5-201ENST00000216122 PRKCSHP14314 528 aaPredicted RBP15.98■□□□□ 0.15
MCM5-201ENST00000216122 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
MCM5-201ENST00000216122 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
MCM5-201ENST00000216122 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
MCM5-201ENST00000216122 MIER1Q8N108 512 aa15.81■□□□□ 0.12
MCM5-201ENST00000216122 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
MCM5-201ENST00000216122 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
MCM5-201ENST00000216122 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
MCM5-201ENST00000216122 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
MCM5-201ENST00000216122 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
MCM5-201ENST00000216122 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
MCM5-201ENST00000216122 BCANQ96GW7 911 aa15.48■□□□□ 0.07
MCM5-201ENST00000216122 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
MCM5-201ENST00000216122 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
MCM5-201ENST00000216122 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
MCM5-201ENST00000216122 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
MCM5-201ENST00000216122 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
MCM5-201ENST00000216122 RBM19Q9Y4C8 960 aaKnown RBP15.36■□□□□ 0.05
MCM5-201ENST00000216122 WIZO95785 1651 aa15.36■□□□□ 0.05
MCM5-201ENST00000216122 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
MCM5-201ENST00000216122 MSH5O43196 834 aa15.31■□□□□ 0.04
MCM5-201ENST00000216122 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
MCM5-201ENST00000216122 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
MCM5-201ENST00000216122 APLP2Q06481 763 aa15.28■□□□□ 0.04
MCM5-201ENST00000216122 FKBP8Q14318 412 aa15.26■□□□□ 0.03
MCM5-201ENST00000216122 ATAD2BQ9ULI0 1458 aa15.24■□□□□ 0.03
MCM5-201ENST00000216122 ITGAEP38570 1179 aa15.23■□□□□ 0.03
MCM5-201ENST00000216122 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
MCM5-201ENST00000216122 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
MCM5-201ENST00000216122 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
MCM5-201ENST00000216122 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
MCM5-201ENST00000216122 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
MCM5-201ENST00000216122 DEKP35659 375 aaKnown RBP15.15■□□□□ 0.02
MCM5-201ENST00000216122 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
MCM5-201ENST00000216122 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
MCM5-201ENST00000216122 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
MCM5-201ENST00000216122 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
MCM5-201ENST00000216122 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
MCM5-201ENST00000216122 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0
MCM5-201ENST00000216122 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
MCM5-201ENST00000216122 NEFLP07196 543 aa15.04■□□□□ -0
MCM5-201ENST00000216122 CEP162Q5TB80 1403 aa15.04■□□□□ -0
MCM5-201ENST00000216122 NCAPD3P42695 1498 aa15□□□□□ -0.01
MCM5-201ENST00000216122 FANCIQ9NVI1 1328 aa14.99□□□□□ -0.01
MCM5-201ENST00000216122 UBTFP17480 764 aaKnown RBP14.99□□□□□ -0.01
MCM5-201ENST00000216122 NBR1Q14596 966 aa14.95□□□□□ -0.02
MCM5-201ENST00000216122 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
MCM5-201ENST00000216122 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
MCM5-201ENST00000216122 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
MCM5-201ENST00000216122 TRIM52Q96A61 297 aa14.91□□□□□ -0.02
MCM5-201ENST00000216122 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
MCM5-201ENST00000216122 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
MCM5-201ENST00000216122 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
MCM5-201ENST00000216122 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
MCM5-201ENST00000216122 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
MCM5-201ENST00000216122 UBE2Q2Q8WVN8 375 aa14.86□□□□□ -0.03
MCM5-201ENST00000216122 NESP48681 1621 aa14.84□□□□□ -0.03
MCM5-201ENST00000216122 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
MCM5-201ENST00000216122 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
MCM5-201ENST00000216122 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
MCM5-201ENST00000216122 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
MCM5-201ENST00000216122 DHX57Q6P158 1386 aaKnown RBP14.8□□□□□ -0.04
MCM5-201ENST00000216122 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
MCM5-201ENST00000216122 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
MCM5-201ENST00000216122 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms