RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
TMEM258-203ENST00000535297 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
TMEM258-203ENST00000535297 ABCC9O60706 1549 aa29.66■■■□□ 2.34
TMEM258-203ENST00000535297 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
TMEM258-203ENST00000535297 NACADO15069 1562 aa28.47■■■□□ 2.15
TMEM258-203ENST00000535297 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
TMEM258-203ENST00000535297 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
TMEM258-203ENST00000535297 ZCCHC6Q5VYS8 1495 aaKnown RBP28.24■■■□□ 2.11
TMEM258-203ENST00000535297 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
TMEM258-203ENST00000535297 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
TMEM258-203ENST00000535297 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
TMEM258-203ENST00000535297 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
TMEM258-203ENST00000535297 SCRIBQ14160 1630 aa27.55■■■□□ 2
TMEM258-203ENST00000535297 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
TMEM258-203ENST00000535297 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
TMEM258-203ENST00000535297 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.9
TMEM258-203ENST00000535297 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
TMEM258-203ENST00000535297 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
TMEM258-203ENST00000535297 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
TMEM258-203ENST00000535297 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
TMEM258-203ENST00000535297 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
TMEM258-203ENST00000535297 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
TMEM258-203ENST00000535297 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
TMEM258-203ENST00000535297 HMGXB3Q12766 1538 aa26.14■■□□□ 1.78
TMEM258-203ENST00000535297 PEG3Q9GZU2 1588 aa26.13■■□□□ 1.77
TMEM258-203ENST00000535297 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
TMEM258-203ENST00000535297 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
TMEM258-203ENST00000535297 WIZO95785 1651 aa25.82■■□□□ 1.72
TMEM258-203ENST00000535297 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
TMEM258-203ENST00000535297 NESP48681 1621 aa25.63■■□□□ 1.69
TMEM258-203ENST00000535297 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
TMEM258-203ENST00000535297 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
TMEM258-203ENST00000535297 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.69
TMEM258-203ENST00000535297 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
TMEM258-203ENST00000535297 CUX2O14529 1486 aa25.43■■□□□ 1.66
TMEM258-203ENST00000535297 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
TMEM258-203ENST00000535297 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
TMEM258-203ENST00000535297 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
TMEM258-203ENST00000535297 CFTRP13569 1480 aa25.28■■□□□ 1.64
TMEM258-203ENST00000535297 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
TMEM258-203ENST00000535297 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
TMEM258-203ENST00000535297 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
TMEM258-203ENST00000535297 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
TMEM258-203ENST00000535297 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
TMEM258-203ENST00000535297 WDR62O43379 1518 aa25.12■■□□□ 1.61
TMEM258-203ENST00000535297 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
TMEM258-203ENST00000535297 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
TMEM258-203ENST00000535297 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
TMEM258-203ENST00000535297 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
TMEM258-203ENST00000535297 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
TMEM258-203ENST00000535297 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
TMEM258-203ENST00000535297 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
TMEM258-203ENST00000535297 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
TMEM258-203ENST00000535297 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
TMEM258-203ENST00000535297 CUX1P39880 1505 aa24.51■■□□□ 1.51
TMEM258-203ENST00000535297 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
TMEM258-203ENST00000535297 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
TMEM258-203ENST00000535297 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
TMEM258-203ENST00000535297 SOGA1O94964 1423 aa24.4■■□□□ 1.5
TMEM258-203ENST00000535297 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
TMEM258-203ENST00000535297 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
TMEM258-203ENST00000535297 AQRO60306 1485 aaKnown RBP eCLIP24.34■■□□□ 1.491e-6■■■■□ 24.7
TMEM258-203ENST00000535297 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
TMEM258-203ENST00000535297 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.489e-6■■■■■ 50.1
TMEM258-203ENST00000535297 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
TMEM258-203ENST00000535297 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
TMEM258-203ENST00000535297 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
TMEM258-203ENST00000535297 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
TMEM258-203ENST00000535297 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
TMEM258-203ENST00000535297 CHD1O14646 1710 aa24.18■■□□□ 1.46
TMEM258-203ENST00000535297 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
TMEM258-203ENST00000535297 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
TMEM258-203ENST00000535297 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
TMEM258-203ENST00000535297 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
TMEM258-203ENST00000535297 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
TMEM258-203ENST00000535297 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
TMEM258-203ENST00000535297 FBLN2P98095 1184 aa24.04■■□□□ 1.44
TMEM258-203ENST00000535297 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
TMEM258-203ENST00000535297 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
TMEM258-203ENST00000535297 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.43
TMEM258-203ENST00000535297 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.43
TMEM258-203ENST00000535297 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.43
TMEM258-203ENST00000535297 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
TMEM258-203ENST00000535297 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
TMEM258-203ENST00000535297 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
TMEM258-203ENST00000535297 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
TMEM258-203ENST00000535297 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
TMEM258-203ENST00000535297 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
TMEM258-203ENST00000535297 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
TMEM258-203ENST00000535297 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
TMEM258-203ENST00000535297 NUP160Q12769 1436 aa23.76■■□□□ 1.39
TMEM258-203ENST00000535297 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
TMEM258-203ENST00000535297 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
TMEM258-203ENST00000535297 CUL7Q14999 1698 aa23.72■■□□□ 1.39
TMEM258-203ENST00000535297 IGF1RP08069 1367 aa23.68■■□□□ 1.38
TMEM258-203ENST00000535297 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
TMEM258-203ENST00000535297 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
TMEM258-203ENST00000535297 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
TMEM258-203ENST00000535297 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
TMEM258-203ENST00000535297 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms