RNA–Protein interactions for RNA: ENST00000557663.1

SNW1-207, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-207ENST00000557663 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
SNW1-207ENST00000557663 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
SNW1-207ENST00000557663 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SNW1-207ENST00000557663 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
SNW1-207ENST00000557663 FOXD1Q16676 465 aa19.49■□□□□ 0.71
SNW1-207ENST00000557663 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
SNW1-207ENST00000557663 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
SNW1-207ENST00000557663 ADRA2BP18089 450 aa18.42■□□□□ 0.54
SNW1-207ENST00000557663 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
SNW1-207ENST00000557663 MSH5O43196 834 aa18.08■□□□□ 0.48
SNW1-207ENST00000557663 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
SNW1-207ENST00000557663 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
SNW1-207ENST00000557663 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SNW1-207ENST00000557663 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
SNW1-207ENST00000557663 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
SNW1-207ENST00000557663 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
SNW1-207ENST00000557663 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
SNW1-207ENST00000557663 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
SNW1-207ENST00000557663 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
SNW1-207ENST00000557663 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
SNW1-207ENST00000557663 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
SNW1-207ENST00000557663 KCNA4P22459 653 aa15.89■□□□□ 0.13
SNW1-207ENST00000557663 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
SNW1-207ENST00000557663 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
SNW1-207ENST00000557663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.053e-6■□□□□ 10.5
SNW1-207ENST00000557663 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
SNW1-207ENST00000557663 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
SNW1-207ENST00000557663 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
SNW1-207ENST00000557663 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
SNW1-207ENST00000557663 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
SNW1-207ENST00000557663 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
SNW1-207ENST00000557663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
SNW1-207ENST00000557663 CAPN15O75808 1086 aa14.72□□□□□ -0.05
SNW1-207ENST00000557663 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
SNW1-207ENST00000557663 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
SNW1-207ENST00000557663 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
SNW1-207ENST00000557663 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
SNW1-207ENST00000557663 APLP2Q06481 763 aa14.64□□□□□ -0.07
SNW1-207ENST00000557663 ZBTB22O15209 634 aa14.63□□□□□ -0.07
SNW1-207ENST00000557663 DSG3P32926 999 aa14.6□□□□□ -0.07
SNW1-207ENST00000557663 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
SNW1-207ENST00000557663 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
SNW1-207ENST00000557663 ABCB7O75027 752 aa14.43□□□□□ -0.1
SNW1-207ENST00000557663 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
SNW1-207ENST00000557663 POLA2Q14181 598 aa14.27□□□□□ -0.13
SNW1-207ENST00000557663 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
SNW1-207ENST00000557663 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
SNW1-207ENST00000557663 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
SNW1-207ENST00000557663 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
SNW1-207ENST00000557663 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
SNW1-207ENST00000557663 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
SNW1-207ENST00000557663 FBLN2P98095 1184 aa13.75□□□□□ -0.21
SNW1-207ENST00000557663 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
SNW1-207ENST00000557663 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
SNW1-207ENST00000557663 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
SNW1-207ENST00000557663 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
SNW1-207ENST00000557663 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
SNW1-207ENST00000557663 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
SNW1-207ENST00000557663 POTEHQ6S545 545 aa13.51□□□□□ -0.25
SNW1-207ENST00000557663 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
SNW1-207ENST00000557663 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
SNW1-207ENST00000557663 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
SNW1-207ENST00000557663 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
SNW1-207ENST00000557663 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNW1-207ENST00000557663 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
SNW1-207ENST00000557663 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
SNW1-207ENST00000557663 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNW1-207ENST00000557663 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
SNW1-207ENST00000557663 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
SNW1-207ENST00000557663 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
SNW1-207ENST00000557663 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SNW1-207ENST00000557663 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
SNW1-207ENST00000557663 PROM2Q8N271 834 aa12.96□□□□□ -0.33
SNW1-207ENST00000557663 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
SNW1-207ENST00000557663 HAX1O00165 279 aa12.91□□□□□ -0.34
SNW1-207ENST00000557663 FKBP8Q14318 412 aa12.84□□□□□ -0.35
SNW1-207ENST00000557663 EVX2Q03828 476 aa12.83□□□□□ -0.36
SNW1-207ENST00000557663 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
SNW1-207ENST00000557663 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
SNW1-207ENST00000557663 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
SNW1-207ENST00000557663 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
SNW1-207ENST00000557663 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
SNW1-207ENST00000557663 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
SNW1-207ENST00000557663 MIER1Q8N108 512 aa12.57□□□□□ -0.4
SNW1-207ENST00000557663 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNW1-207ENST00000557663 GABBR2O75899 941 aa12.52□□□□□ -0.41
SNW1-207ENST00000557663 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
SNW1-207ENST00000557663 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
SNW1-207ENST00000557663 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
SNW1-207ENST00000557663 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
SNW1-207ENST00000557663 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
SNW1-207ENST00000557663 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
SNW1-207ENST00000557663 CLCN6P51797 869 aa12.39□□□□□ -0.43
SNW1-207ENST00000557663 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
SNW1-207ENST00000557663 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
SNW1-207ENST00000557663 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
SNW1-207ENST00000557663 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
SNW1-207ENST00000557663 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
SNW1-207ENST00000557663 NUBP1P53384 320 aa12.31□□□□□ -0.44
SNW1-207ENST00000557663 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms