RNA–Protein interactions for RNA: ENST00000607866.1

ITM2B-204, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-204ENST00000607866 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
ITM2B-204ENST00000607866 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
ITM2B-204ENST00000607866 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
ITM2B-204ENST00000607866 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
ITM2B-204ENST00000607866 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
ITM2B-204ENST00000607866 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
ITM2B-204ENST00000607866 ADRA2BP18089 450 aa13.49□□□□□ -0.25
ITM2B-204ENST00000607866 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
ITM2B-204ENST00000607866 ABCC9O60706 1549 aa13.4□□□□□ -0.26
ITM2B-204ENST00000607866 FOXD1Q16676 465 aa13.38□□□□□ -0.27
ITM2B-204ENST00000607866 KCNA4P22459 653 aa13.31□□□□□ -0.28
ITM2B-204ENST00000607866 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
ITM2B-204ENST00000607866 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
ITM2B-204ENST00000607866 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
ITM2B-204ENST00000607866 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
ITM2B-204ENST00000607866 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
ITM2B-204ENST00000607866 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
ITM2B-204ENST00000607866 NACADO15069 1562 aa12.7□□□□□ -0.38
ITM2B-204ENST00000607866 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
ITM2B-204ENST00000607866 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
ITM2B-204ENST00000607866 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
ITM2B-204ENST00000607866 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
ITM2B-204ENST00000607866 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
ITM2B-204ENST00000607866 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
ITM2B-204ENST00000607866 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
ITM2B-204ENST00000607866 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
ITM2B-204ENST00000607866 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.42
ITM2B-204ENST00000607866 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.43
ITM2B-204ENST00000607866 DCAF1Q9Y4B6 1507 aa12.37□□□□□ -0.43
ITM2B-204ENST00000607866 ZBTB22O15209 634 aa12.31□□□□□ -0.44
ITM2B-204ENST00000607866 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
ITM2B-204ENST00000607866 MSH5O43196 834 aa12.27□□□□□ -0.45
ITM2B-204ENST00000607866 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
ITM2B-204ENST00000607866 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
ITM2B-204ENST00000607866 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
ITM2B-204ENST00000607866 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
ITM2B-204ENST00000607866 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
ITM2B-204ENST00000607866 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
ITM2B-204ENST00000607866 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
ITM2B-204ENST00000607866 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
ITM2B-204ENST00000607866 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
ITM2B-204ENST00000607866 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
ITM2B-204ENST00000607866 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.53
ITM2B-204ENST00000607866 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
ITM2B-204ENST00000607866 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
ITM2B-204ENST00000607866 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
ITM2B-204ENST00000607866 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
ITM2B-204ENST00000607866 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
ITM2B-204ENST00000607866 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
ITM2B-204ENST00000607866 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
ITM2B-204ENST00000607866 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
ITM2B-204ENST00000607866 CUX2O14529 1486 aa11.59□□□□□ -0.55
ITM2B-204ENST00000607866 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
ITM2B-204ENST00000607866 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
ITM2B-204ENST00000607866 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
ITM2B-204ENST00000607866 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
ITM2B-204ENST00000607866 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
ITM2B-204ENST00000607866 NESP48681 1621 aa11.51□□□□□ -0.57
ITM2B-204ENST00000607866 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
ITM2B-204ENST00000607866 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
ITM2B-204ENST00000607866 FKBP8Q14318 412 aa11.48□□□□□ -0.57
ITM2B-204ENST00000607866 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
ITM2B-204ENST00000607866 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
ITM2B-204ENST00000607866 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
ITM2B-204ENST00000607866 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
ITM2B-204ENST00000607866 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
ITM2B-204ENST00000607866 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
ITM2B-204ENST00000607866 WIZO95785 1651 aa11.36□□□□□ -0.59
ITM2B-204ENST00000607866 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
ITM2B-204ENST00000607866 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
ITM2B-204ENST00000607866 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
ITM2B-204ENST00000607866 WDR62O43379 1518 aa11.27□□□□□ -0.61
ITM2B-204ENST00000607866 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
ITM2B-204ENST00000607866 CFTRP13569 1480 aa11.24□□□□□ -0.61
ITM2B-204ENST00000607866 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
ITM2B-204ENST00000607866 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
ITM2B-204ENST00000607866 FANCD2Q9BXW9 1451 aa11.23□□□□□ -0.61
ITM2B-204ENST00000607866 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
ITM2B-204ENST00000607866 PRDM2Q13029 1718 aa11.13□□□□□ -0.63
ITM2B-204ENST00000607866 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
ITM2B-204ENST00000607866 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
ITM2B-204ENST00000607866 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
ITM2B-204ENST00000607866 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
ITM2B-204ENST00000607866 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
ITM2B-204ENST00000607866 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
ITM2B-204ENST00000607866 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
ITM2B-204ENST00000607866 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
ITM2B-204ENST00000607866 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
ITM2B-204ENST00000607866 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
ITM2B-204ENST00000607866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.654e-9■■□□□ 11.6
ITM2B-204ENST00000607866 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
ITM2B-204ENST00000607866 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
ITM2B-204ENST00000607866 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
ITM2B-204ENST00000607866 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
ITM2B-204ENST00000607866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
ITM2B-204ENST00000607866 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
ITM2B-204ENST00000607866 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.66
ITM2B-204ENST00000607866 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
ITM2B-204ENST00000607866 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
ITM2B-204ENST00000607866 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms