RNA–Protein interactions for RNA: ENST00000323213.9

EIF3M-201, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 5

Gene EIF3M, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-201ENST00000323213 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
EIF3M-201ENST00000323213 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
EIF3M-201ENST00000323213 ABCC9O60706 1549 aa34.48■■■■□ 3.11
EIF3M-201ENST00000323213 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
EIF3M-201ENST00000323213 NACADO15069 1562 aa32.79■■■□□ 2.84
EIF3M-201ENST00000323213 DCAF8L2P0C7V8 631 aa32.72■■■□□ 2.83
EIF3M-201ENST00000323213 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
EIF3M-201ENST00000323213 ZCCHC6Q5VYS8 1495 aaKnown RBP32.36■■■□□ 2.77
EIF3M-201ENST00000323213 DCAF1Q9Y4B6 1507 aa32.2■■■□□ 2.74
EIF3M-201ENST00000323213 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
EIF3M-201ENST00000323213 DNAJC5BQ9UF47 199 aa32.13■■■□□ 2.73
EIF3M-201ENST00000323213 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
EIF3M-201ENST00000323213 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.71
EIF3M-201ENST00000323213 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
EIF3M-201ENST00000323213 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
EIF3M-201ENST00000323213 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
EIF3M-201ENST00000323213 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
EIF3M-201ENST00000323213 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
EIF3M-201ENST00000323213 NCAPD3P42695 1498 aa30.33■■■□□ 2.45
EIF3M-201ENST00000323213 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
EIF3M-201ENST00000323213 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
EIF3M-201ENST00000323213 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
EIF3M-201ENST00000323213 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
EIF3M-201ENST00000323213 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
EIF3M-201ENST00000323213 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
EIF3M-201ENST00000323213 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
EIF3M-201ENST00000323213 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
EIF3M-201ENST00000323213 NESP48681 1621 aa29.73■■■□□ 2.35
EIF3M-201ENST00000323213 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
EIF3M-201ENST00000323213 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
EIF3M-201ENST00000323213 WIZO95785 1651 aa29.64■■■□□ 2.34
EIF3M-201ENST00000323213 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
EIF3M-201ENST00000323213 CUX2O14529 1486 aa29.55■■■□□ 2.32
EIF3M-201ENST00000323213 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
EIF3M-201ENST00000323213 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
EIF3M-201ENST00000323213 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
EIF3M-201ENST00000323213 THOC2Q8NI27 1593 aaKnown RBP29.32■■■□□ 2.28
EIF3M-201ENST00000323213 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
EIF3M-201ENST00000323213 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
EIF3M-201ENST00000323213 CFTRP13569 1480 aa29.16■■■□□ 2.26
EIF3M-201ENST00000323213 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
EIF3M-201ENST00000323213 FANCD2Q9BXW9 1451 aa29.06■■■□□ 2.24
EIF3M-201ENST00000323213 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
EIF3M-201ENST00000323213 WDR62O43379 1518 aa29.02■■■□□ 2.24
EIF3M-201ENST00000323213 CCDC88BA6NC98 1476 aa29.01■■■□□ 2.23
EIF3M-201ENST00000323213 URB2Q14146 1524 aaKnown RBP28.82■■■□□ 2.2
EIF3M-201ENST00000323213 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
EIF3M-201ENST00000323213 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
EIF3M-201ENST00000323213 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
EIF3M-201ENST00000323213 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
EIF3M-201ENST00000323213 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
EIF3M-201ENST00000323213 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
EIF3M-201ENST00000323213 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
EIF3M-201ENST00000323213 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
EIF3M-201ENST00000323213 POLA1P09884 1462 aaPredicted RBP28.29■■■□□ 2.12
EIF3M-201ENST00000323213 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
EIF3M-201ENST00000323213 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
EIF3M-201ENST00000323213 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
EIF3M-201ENST00000323213 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.12e-7■□□□□ 11
EIF3M-201ENST00000323213 CUX1P39880 1505 aa28.19■■■□□ 2.1
EIF3M-201ENST00000323213 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
EIF3M-201ENST00000323213 SOGA1O94964 1423 aa28.17■■■□□ 2.1
EIF3M-201ENST00000323213 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
EIF3M-201ENST00000323213 TDRD9Q8NDG6 1382 aaKnown RBP28.09■■■□□ 2.09
EIF3M-201ENST00000323213 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
EIF3M-201ENST00000323213 FBLN2P98095 1184 aa27.91■■■□□ 2.06
EIF3M-201ENST00000323213 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
EIF3M-201ENST00000323213 CHD1O14646 1710 aa27.89■■■□□ 2.05
EIF3M-201ENST00000323213 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
EIF3M-201ENST00000323213 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
EIF3M-201ENST00000323213 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
EIF3M-201ENST00000323213 RIMBP3CA6NJZ7 1639 aa27.84■■■□□ 2.05
EIF3M-201ENST00000323213 RIMBP3BA6NNM3 1639 aa27.84■■■□□ 2.05
EIF3M-201ENST00000323213 RIMBP3Q9UFD9 1639 aa27.84■■■□□ 2.05
EIF3M-201ENST00000323213 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.04
EIF3M-201ENST00000323213 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
EIF3M-201ENST00000323213 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
EIF3M-201ENST00000323213 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
EIF3M-201ENST00000323213 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
EIF3M-201ENST00000323213 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
EIF3M-201ENST00000323213 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
EIF3M-201ENST00000323213 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
EIF3M-201ENST00000323213 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
EIF3M-201ENST00000323213 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
EIF3M-201ENST00000323213 CLASP1Q7Z460 1538 aa27.66■■■□□ 2.02
EIF3M-201ENST00000323213 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
EIF3M-201ENST00000323213 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
EIF3M-201ENST00000323213 ADAMTS12P58397 1594 aa27.52■■■□□ 2
EIF3M-201ENST00000323213 GRIN2AQ12879 1464 aa27.51■■■□□ 2
EIF3M-201ENST00000323213 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
EIF3M-201ENST00000323213 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
EIF3M-201ENST00000323213 NUP160Q12769 1436 aa27.43■■□□□ 1.98
EIF3M-201ENST00000323213 CEP170Q5SW79 1584 aa27.39■■□□□ 1.98
EIF3M-201ENST00000323213 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
EIF3M-201ENST00000323213 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
EIF3M-201ENST00000323213 IGF1RP08069 1367 aa27.28■■□□□ 1.96
EIF3M-201ENST00000323213 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
EIF3M-201ENST00000323213 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
EIF3M-201ENST00000323213 JPH4Q96JJ6 628 aa27.16■■□□□ 1.94
EIF3M-201ENST00000323213 PRG4Q92954 1404 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms