RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 NISCHQ9Y2I1 1504 aa53.76■■■■■ 6.2
SNRNP70-204ENST00000595231 CCDC180Q9P1Z9 1646 aa47.47■■■■■ 5.19
SNRNP70-204ENST00000595231 ABCC9O60706 1549 aa45.92■■■■■ 4.94
SNRNP70-204ENST00000595231 ZCCHC6Q5VYS8 1495 aaKnown RBP44.9■■■■■ 4.78
SNRNP70-204ENST00000595231 DCAF8L2P0C7V8 631 aa44.67■■■■■ 4.74
SNRNP70-204ENST00000595231 NACADO15069 1562 aa44.5■■■■■ 4.71
SNRNP70-204ENST00000595231 DCAF1Q9Y4B6 1507 aa44.5■■■■■ 4.71
SNRNP70-204ENST00000595231 MYO15BQ96JP2 1530 aa44.45■■■■■ 4.71
SNRNP70-204ENST00000595231 RB1CC1Q8TDY2 1594 aa44.39■■■■■ 4.7
SNRNP70-204ENST00000595231 UNC13AQ9UPW8 1703 aa43.46■■■■■ 4.55
SNRNP70-204ENST00000595231 SCRIBQ14160 1630 aa43.4■■■■■ 4.54
SNRNP70-204ENST00000595231 BICRAQ9NZM4 1560 aa43.11■■■■■ 4.49
SNRNP70-204ENST00000595231 PABPN1Q86U42 306 aaKnown RBP eCLIP43.05■■■■■ 4.482e-12■■■■□ 21.8
SNRNP70-204ENST00000595231 SHROOM4Q9ULL8 1493 aa42.85■■■■■ 4.45
SNRNP70-204ENST00000595231 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.3
SNRNP70-204ENST00000595231 CECR2Q9BXF3 1484 aa41.85■■■■■ 4.29
SNRNP70-204ENST00000595231 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
SNRNP70-204ENST00000595231 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
SNRNP70-204ENST00000595231 SMARCA4P51532 1647 aa41.57■■■■■ 4.24
SNRNP70-204ENST00000595231 CC2D2AQ9P2K1 1620 aa41.56■■■■■ 4.24
SNRNP70-204ENST00000595231 MROH2BQ7Z745 1585 aa41.47■■■■■ 4.23
SNRNP70-204ENST00000595231 RSF1Q96T23 1441 aaPredicted RBP41.22■■■■■ 4.19
SNRNP70-204ENST00000595231 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
SNRNP70-204ENST00000595231 PEG3Q9GZU2 1588 aa41.17■■■■■ 4.18
SNRNP70-204ENST00000595231 SMARCA2P51531 1590 aa41.14■■■■■ 4.18
SNRNP70-204ENST00000595231 NCAPD3P42695 1498 aa41.1■■■■■ 4.17
SNRNP70-204ENST00000595231 WIZO95785 1651 aa41.05■■■■■ 4.16
SNRNP70-204ENST00000595231 HMGXB3Q12766 1538 aa40.91■■■■■ 4.14
SNRNP70-204ENST00000595231 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
SNRNP70-204ENST00000595231 SUPT5HO00267 1087 aaKnown RBP40.62■■■■■ 4.09
SNRNP70-204ENST00000595231 TOP2AP11388 1531 aaKnown RBP40.6■■■■■ 4.09
SNRNP70-204ENST00000595231 CCDC88BA6NC98 1476 aa40.17■■■■■ 4.02
SNRNP70-204ENST00000595231 NESP48681 1621 aa39.95■■■■□ 3.99
SNRNP70-204ENST00000595231 CADPSQ9ULU8 1353 aa39.94■■■■□ 3.98
SNRNP70-204ENST00000595231 LAMC3Q9Y6N6 1575 aa39.88■■■■□ 3.97
SNRNP70-204ENST00000595231 CFTRP13569 1480 aa39.83■■■■□ 3.97
SNRNP70-204ENST00000595231 PDS5BQ9NTI5 1447 aa39.59■■■■□ 3.93
SNRNP70-204ENST00000595231 PRDM2Q13029 1718 aa39.52■■■■□ 3.92
SNRNP70-204ENST00000595231 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
SNRNP70-204ENST00000595231 FANCD2Q9BXW9 1451 aa39.46■■■■□ 3.91
SNRNP70-204ENST00000595231 KIF21AQ7Z4S6 1674 aa39.46■■■■□ 3.91
SNRNP70-204ENST00000595231 CEP164Q9UPV0 1460 aa39.33■■■■□ 3.89
SNRNP70-204ENST00000595231 THOC2Q8NI27 1593 aaKnown RBP39.17■■■■□ 3.86
SNRNP70-204ENST00000595231 MRC2Q9UBG0 1479 aa39.15■■■■□ 3.86
SNRNP70-204ENST00000595231 URB2Q14146 1524 aaKnown RBP39.05■■■■□ 3.84
SNRNP70-204ENST00000595231 WDR62O43379 1518 aa39.01■■■■□ 3.84
SNRNP70-204ENST00000595231 TOPBP1Q92547 1522 aa38.9■■■■□ 3.82
SNRNP70-204ENST00000595231 ABCC8Q09428 1581 aa38.89■■■■□ 3.82
SNRNP70-204ENST00000595231 DNMBPQ6XZF7 1577 aa38.89■■■■□ 3.82
SNRNP70-204ENST00000595231 CUX2O14529 1486 aa38.85■■■■□ 3.81
SNRNP70-204ENST00000595231 CUX1P39880 1505 aa38.85■■■■□ 3.81
SNRNP70-204ENST00000595231 WRNQ14191 1432 aaPredicted RBP eCLIP38.81■■■■□ 3.89e-10■■□□□ 11.7
SNRNP70-204ENST00000595231 SYNJ1O43426 1573 aa38.7■■■■□ 3.79
SNRNP70-204ENST00000595231 TOP2BQ02880 1626 aa38.67■■■■□ 3.78
SNRNP70-204ENST00000595231 BIVM-ERCC5R4GMW8 1640 aa38.64■■■■□ 3.78
SNRNP70-204ENST00000595231 POLA1P09884 1462 aaPredicted RBP38.62■■■■□ 3.77
SNRNP70-204ENST00000595231 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
SNRNP70-204ENST00000595231 IFT140Q96RY7 1462 aa38.48■■■■□ 3.75
SNRNP70-204ENST00000595231 SOGA1O94964 1423 aa38.47■■■■□ 3.75
SNRNP70-204ENST00000595231 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
SNRNP70-204ENST00000595231 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
SNRNP70-204ENST00000595231 TRIM41Q8WV44 630 aa38.33■■■■□ 3.73
SNRNP70-204ENST00000595231 ZNF608Q9ULD9 1512 aaPredicted RBP38.31■■■■□ 3.72
SNRNP70-204ENST00000595231 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
SNRNP70-204ENST00000595231 ABCA10Q8WWZ4 1543 aa38.27■■■■□ 3.72
SNRNP70-204ENST00000595231 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
SNRNP70-204ENST00000595231 TDRD9Q8NDG6 1382 aaKnown RBP38.2■■■■□ 3.71
SNRNP70-204ENST00000595231 AQRO60306 1485 aaKnown RBP eCLIP38.18■■■■□ 3.76e-9■■■■■ 36.7
SNRNP70-204ENST00000595231 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
SNRNP70-204ENST00000595231 ABCA5Q8WWZ7 1642 aa38.05■■■■□ 3.68
SNRNP70-204ENST00000595231 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
SNRNP70-204ENST00000595231 KIF27Q86VH2 1401 aa37.94■■■■□ 3.66
SNRNP70-204ENST00000595231 GRIN2BQ13224 1484 aa37.93■■■■□ 3.66
SNRNP70-204ENST00000595231 PBRM1Q86U86 1689 aa37.88■■■■□ 3.65
SNRNP70-204ENST00000595231 RUSC2Q8N2Y8 1516 aa37.86■■■■□ 3.65
SNRNP70-204ENST00000595231 ERICH3Q5RHP9 1530 aa37.8■■■■□ 3.64
SNRNP70-204ENST00000595231 SNAPC4Q5SXM2 1469 aa37.79■■■■□ 3.64
SNRNP70-204ENST00000595231 IGF1RP08069 1367 aa37.77■■■■□ 3.64
SNRNP70-204ENST00000595231 MAGI1Q96QZ7 1491 aaPredicted RBP37.76■■■■□ 3.63
SNRNP70-204ENST00000595231 ADAMTS12P58397 1594 aa37.63■■■■□ 3.61
SNRNP70-204ENST00000595231 SYNJ2O15056 1496 aa37.62■■■■□ 3.61
SNRNP70-204ENST00000595231 FHAD1B1AJZ9 1412 aa37.6■■■■□ 3.61
SNRNP70-204ENST00000595231 EEA1Q15075 1411 aa37.6■■■■□ 3.61
SNRNP70-204ENST00000595231 FBLN2P98095 1184 aa37.56■■■■□ 3.6
SNRNP70-204ENST00000595231 CHMP7Q8WUX9 453 aaPredicted RBP37.56■■■■□ 3.6
SNRNP70-204ENST00000595231 CUL7Q14999 1698 aa37.55■■■■□ 3.6
SNRNP70-204ENST00000595231 CHD1O14646 1710 aa37.54■■■■□ 3.6
SNRNP70-204ENST00000595231 FAM9AQ8IZU1 332 aaPredicted RBP37.53■■■■□ 3.6
SNRNP70-204ENST00000595231 CARMIL1Q5VZK9 1371 aa37.52■■■■□ 3.6
SNRNP70-204ENST00000595231 CSRNP3Q8WYN3 585 aa37.52■■■■□ 3.6
SNRNP70-204ENST00000595231 GRIN2AQ12879 1464 aa37.45■■■■□ 3.58
SNRNP70-204ENST00000595231 OSCARQ8IYS5 282 aa37.41■■■■□ 3.58
SNRNP70-204ENST00000595231 PRXQ9BXM0 1461 aa37.4■■■■□ 3.58
SNRNP70-204ENST00000595231 RAPGEF2Q9Y4G8 1499 aa37.35■■■■□ 3.57
SNRNP70-204ENST00000595231 NUP160Q12769 1436 aa37.27■■■■□ 3.56
SNRNP70-204ENST00000595231 CEP170Q5SW79 1584 aa37.26■■■■□ 3.55
SNRNP70-204ENST00000595231 KIF21BO75037 1637 aa37.17■■■■□ 3.54
SNRNP70-204ENST00000595231 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
SNRNP70-204ENST00000595231 KIAA0586Q9BVV6 1533 aa37.06■■■■□ 3.52
SNRNP70-204ENST00000595231 DNAJC5Q9H3Z4 198 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms