RNA–Protein interactions for RNA: ENST00000484575.1

IDH1-209, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

TSL 2

Gene IDH1, Length 1,044 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-209ENST00000484575 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
IDH1-209ENST00000484575 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
IDH1-209ENST00000484575 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
IDH1-209ENST00000484575 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
IDH1-209ENST00000484575 FOXD1Q16676 465 aa20.8■□□□□ 0.92
IDH1-209ENST00000484575 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
IDH1-209ENST00000484575 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
IDH1-209ENST00000484575 ADRA2BP18089 450 aa19.79■□□□□ 0.76
IDH1-209ENST00000484575 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
IDH1-209ENST00000484575 MSH5O43196 834 aa19.37■□□□□ 0.69
IDH1-209ENST00000484575 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
IDH1-209ENST00000484575 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
IDH1-209ENST00000484575 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
IDH1-209ENST00000484575 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
IDH1-209ENST00000484575 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
IDH1-209ENST00000484575 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
IDH1-209ENST00000484575 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
IDH1-209ENST00000484575 KCNA4P22459 653 aa17.49■□□□□ 0.39
IDH1-209ENST00000484575 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
IDH1-209ENST00000484575 HOXD11P31277 338 aaPredicted RBP17.47■□□□□ 0.39
IDH1-209ENST00000484575 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
IDH1-209ENST00000484575 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
IDH1-209ENST00000484575 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
IDH1-209ENST00000484575 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
IDH1-209ENST00000484575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.252e-12■□□□□ 8.7
IDH1-209ENST00000484575 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
IDH1-209ENST00000484575 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
IDH1-209ENST00000484575 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
IDH1-209ENST00000484575 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
IDH1-209ENST00000484575 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
IDH1-209ENST00000484575 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
IDH1-209ENST00000484575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
IDH1-209ENST00000484575 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
IDH1-209ENST00000484575 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
IDH1-209ENST00000484575 APLP2Q06481 763 aa16.07■□□□□ 0.16
IDH1-209ENST00000484575 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
IDH1-209ENST00000484575 ZBTB22O15209 634 aa16.05■□□□□ 0.16
IDH1-209ENST00000484575 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
IDH1-209ENST00000484575 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
IDH1-209ENST00000484575 CAPN15O75808 1086 aa15.85■□□□□ 0.13
IDH1-209ENST00000484575 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
IDH1-209ENST00000484575 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
IDH1-209ENST00000484575 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
IDH1-209ENST00000484575 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
IDH1-209ENST00000484575 DSG3P32926 999 aa15.64■□□□□ 0.09
IDH1-209ENST00000484575 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
IDH1-209ENST00000484575 ABCB7O75027 752 aa15.46■□□□□ 0.07
IDH1-209ENST00000484575 POLA2Q14181 598 aa15.44■□□□□ 0.06
IDH1-209ENST00000484575 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
IDH1-209ENST00000484575 FBLN2P98095 1184 aa15.09■□□□□ 0.01
IDH1-209ENST00000484575 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
IDH1-209ENST00000484575 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
IDH1-209ENST00000484575 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
IDH1-209ENST00000484575 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
IDH1-209ENST00000484575 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
IDH1-209ENST00000484575 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
IDH1-209ENST00000484575 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
IDH1-209ENST00000484575 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
IDH1-209ENST00000484575 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
IDH1-209ENST00000484575 POTEHQ6S545 545 aa14.62□□□□□ -0.07
IDH1-209ENST00000484575 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
IDH1-209ENST00000484575 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
IDH1-209ENST00000484575 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
IDH1-209ENST00000484575 SPDYE1Q8NFV5 336 aaPredicted RBP14.42□□□□□ -0.1
IDH1-209ENST00000484575 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
IDH1-209ENST00000484575 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
IDH1-209ENST00000484575 FKBP8Q14318 412 aa14.35□□□□□ -0.11
IDH1-209ENST00000484575 PROM2Q8N271 834 aa14.32□□□□□ -0.12
IDH1-209ENST00000484575 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
IDH1-209ENST00000484575 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
IDH1-209ENST00000484575 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
IDH1-209ENST00000484575 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.142e-7■■■□□ 16
IDH1-209ENST00000484575 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
IDH1-209ENST00000484575 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
IDH1-209ENST00000484575 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
IDH1-209ENST00000484575 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
IDH1-209ENST00000484575 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
IDH1-209ENST00000484575 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
IDH1-209ENST00000484575 MIER1Q8N108 512 aa13.85□□□□□ -0.19
IDH1-209ENST00000484575 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
IDH1-209ENST00000484575 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
IDH1-209ENST00000484575 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
IDH1-209ENST00000484575 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
IDH1-209ENST00000484575 HAX1O00165 279 aa13.75□□□□□ -0.21
IDH1-209ENST00000484575 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
IDH1-209ENST00000484575 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
IDH1-209ENST00000484575 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
IDH1-209ENST00000484575 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
IDH1-209ENST00000484575 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
IDH1-209ENST00000484575 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
IDH1-209ENST00000484575 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
IDH1-209ENST00000484575 CLCN6P51797 869 aa13.52□□□□□ -0.25
IDH1-209ENST00000484575 EVX2Q03828 476 aa13.52□□□□□ -0.25
IDH1-209ENST00000484575 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
IDH1-209ENST00000484575 NUBP1P53384 320 aa13.49□□□□□ -0.25
IDH1-209ENST00000484575 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
IDH1-209ENST00000484575 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
IDH1-209ENST00000484575 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
IDH1-209ENST00000484575 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
IDH1-209ENST00000484575 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms