RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
KDM4B-204ENST00000588166 ABCC9O60706 1549 aa33.28■■■□□ 2.92
KDM4B-204ENST00000588166 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
KDM4B-204ENST00000588166 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
KDM4B-204ENST00000588166 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
KDM4B-204ENST00000588166 NACADO15069 1562 aa31.34■■■□□ 2.61
KDM4B-204ENST00000588166 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
KDM4B-204ENST00000588166 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
KDM4B-204ENST00000588166 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
KDM4B-204ENST00000588166 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
KDM4B-204ENST00000588166 BICRAQ9NZM4 1560 aa30.77■■■□□ 2.52
KDM4B-204ENST00000588166 ZCCHC6Q5VYS8 1495 aaKnown RBP30.46■■■□□ 2.47
KDM4B-204ENST00000588166 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
KDM4B-204ENST00000588166 SHROOM4Q9ULL8 1493 aa30.29■■■□□ 2.44
KDM4B-204ENST00000588166 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
KDM4B-204ENST00000588166 CC2D2AQ9P2K1 1620 aa30.1■■■□□ 2.41
KDM4B-204ENST00000588166 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.4
KDM4B-204ENST00000588166 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
KDM4B-204ENST00000588166 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
KDM4B-204ENST00000588166 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
KDM4B-204ENST00000588166 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
KDM4B-204ENST00000588166 CUX2O14529 1486 aa28.8■■■□□ 2.2
KDM4B-204ENST00000588166 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
KDM4B-204ENST00000588166 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
KDM4B-204ENST00000588166 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
KDM4B-204ENST00000588166 ERCC6Q03468 1493 aa28.71■■■□□ 2.19
KDM4B-204ENST00000588166 NESP48681 1621 aa28.56■■■□□ 2.16
KDM4B-204ENST00000588166 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
KDM4B-204ENST00000588166 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
KDM4B-204ENST00000588166 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
KDM4B-204ENST00000588166 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
KDM4B-204ENST00000588166 MROH2BQ7Z745 1585 aa28.35■■■□□ 2.13
KDM4B-204ENST00000588166 LAMC3Q9Y6N6 1575 aa28.32■■■□□ 2.12
KDM4B-204ENST00000588166 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.11
KDM4B-204ENST00000588166 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
KDM4B-204ENST00000588166 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
KDM4B-204ENST00000588166 WIZO95785 1651 aa27.99■■■□□ 2.07
KDM4B-204ENST00000588166 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
KDM4B-204ENST00000588166 WDR62O43379 1518 aa27.91■■■□□ 2.06
KDM4B-204ENST00000588166 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
KDM4B-204ENST00000588166 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
KDM4B-204ENST00000588166 CFTRP13569 1480 aa27.7■■■□□ 2.02
KDM4B-204ENST00000588166 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
KDM4B-204ENST00000588166 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
KDM4B-204ENST00000588166 TRIM41Q8WV44 630 aa27.57■■■□□ 2
KDM4B-204ENST00000588166 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
KDM4B-204ENST00000588166 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
KDM4B-204ENST00000588166 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
KDM4B-204ENST00000588166 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
KDM4B-204ENST00000588166 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
KDM4B-204ENST00000588166 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
KDM4B-204ENST00000588166 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
KDM4B-204ENST00000588166 RIMBP3CA6NJZ7 1639 aa27.13■■□□□ 1.93
KDM4B-204ENST00000588166 RIMBP3BA6NNM3 1639 aa27.13■■□□□ 1.93
KDM4B-204ENST00000588166 RIMBP3Q9UFD9 1639 aa27.13■■□□□ 1.93
KDM4B-204ENST00000588166 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
KDM4B-204ENST00000588166 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
KDM4B-204ENST00000588166 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
KDM4B-204ENST00000588166 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
KDM4B-204ENST00000588166 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
KDM4B-204ENST00000588166 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-6■■■□□ 17
KDM4B-204ENST00000588166 CHD1O14646 1710 aa26.9■■□□□ 1.9
KDM4B-204ENST00000588166 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
KDM4B-204ENST00000588166 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
KDM4B-204ENST00000588166 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
KDM4B-204ENST00000588166 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
KDM4B-204ENST00000588166 SOGA1O94964 1423 aa26.73■■□□□ 1.87
KDM4B-204ENST00000588166 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
KDM4B-204ENST00000588166 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
KDM4B-204ENST00000588166 FBLN2P98095 1184 aa26.68■■□□□ 1.86
KDM4B-204ENST00000588166 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
KDM4B-204ENST00000588166 CUX1P39880 1505 aa26.65■■□□□ 1.86
KDM4B-204ENST00000588166 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
KDM4B-204ENST00000588166 CLASP1Q7Z460 1538 aa26.62■■□□□ 1.85
KDM4B-204ENST00000588166 MAGI1Q96QZ7 1491 aaPredicted RBP26.57■■□□□ 1.84
KDM4B-204ENST00000588166 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
KDM4B-204ENST00000588166 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
KDM4B-204ENST00000588166 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
KDM4B-204ENST00000588166 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
KDM4B-204ENST00000588166 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
KDM4B-204ENST00000588166 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
KDM4B-204ENST00000588166 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
KDM4B-204ENST00000588166 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
KDM4B-204ENST00000588166 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.81
KDM4B-204ENST00000588166 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
KDM4B-204ENST00000588166 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
KDM4B-204ENST00000588166 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
KDM4B-204ENST00000588166 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
KDM4B-204ENST00000588166 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
KDM4B-204ENST00000588166 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
KDM4B-204ENST00000588166 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
KDM4B-204ENST00000588166 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
KDM4B-204ENST00000588166 NUP160Q12769 1436 aa26.15■■□□□ 1.78
KDM4B-204ENST00000588166 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
KDM4B-204ENST00000588166 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
KDM4B-204ENST00000588166 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
KDM4B-204ENST00000588166 PRG4Q92954 1404 aaPredicted RBP25.87■■□□□ 1.73
KDM4B-204ENST00000588166 KIF13AQ9H1H9 1805 aa25.86■■□□□ 1.73
KDM4B-204ENST00000588166 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
KDM4B-204ENST00000588166 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms