RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
SORT1-203ENST00000471996 ABCC9O60706 1549 aa44.67■■■■■ 4.74
SORT1-203ENST00000471996 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
SORT1-203ENST00000471996 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
SORT1-203ENST00000471996 RB1CC1Q8TDY2 1594 aa42.18■■■■■ 4.34
SORT1-203ENST00000471996 NACADO15069 1562 aa41.74■■■■■ 4.27
SORT1-203ENST00000471996 PABPN1Q86U42 306 aaKnown RBP eCLIP41.52■■■■■ 4.24
SORT1-203ENST00000471996 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
SORT1-203ENST00000471996 UNC13AQ9UPW8 1703 aa41.1■■■■■ 4.17
SORT1-203ENST00000471996 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
SORT1-203ENST00000471996 MYO15BQ96JP2 1530 aa40.96■■■■■ 4.15
SORT1-203ENST00000471996 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
SORT1-203ENST00000471996 CECR2Q9BXF3 1484 aa40.33■■■■■ 4.05
SORT1-203ENST00000471996 CC2D2AQ9P2K1 1620 aa40.28■■■■■ 4.04
SORT1-203ENST00000471996 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
SORT1-203ENST00000471996 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
SORT1-203ENST00000471996 EIF4G1Q04637 1599 aaKnown RBP40.04■■■■■ 4
SORT1-203ENST00000471996 SCRIBQ14160 1630 aa39.97■■■■□ 3.99
SORT1-203ENST00000471996 DNAJC5Q9H3Z4 198 aa39.66■■■■□ 3.94
SORT1-203ENST00000471996 CUX2O14529 1486 aa38.8■■■■□ 3.8
SORT1-203ENST00000471996 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
SORT1-203ENST00000471996 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
SORT1-203ENST00000471996 ATAD2BQ9ULI0 1458 aa38.35■■■■□ 3.73
SORT1-203ENST00000471996 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
SORT1-203ENST00000471996 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
SORT1-203ENST00000471996 NESP48681 1621 aa38.16■■■■□ 3.7
SORT1-203ENST00000471996 SMARCA4P51532 1647 aa38.07■■■■□ 3.68
SORT1-203ENST00000471996 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
SORT1-203ENST00000471996 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
SORT1-203ENST00000471996 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
SORT1-203ENST00000471996 LAMC3Q9Y6N6 1575 aa37.76■■■■□ 3.64
SORT1-203ENST00000471996 PEG3Q9GZU2 1588 aa37.73■■■■□ 3.63
SORT1-203ENST00000471996 PDS5BQ9NTI5 1447 aa37.63■■■■□ 3.61
SORT1-203ENST00000471996 TRIM41Q8WV44 630 aa37.58■■■■□ 3.61
SORT1-203ENST00000471996 KIF21AQ7Z4S6 1674 aa37.56■■■■□ 3.6
SORT1-203ENST00000471996 MROH2BQ7Z745 1585 aa37.48■■■■□ 3.59
SORT1-203ENST00000471996 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
SORT1-203ENST00000471996 MRC2Q9UBG0 1479 aa37.32■■■■□ 3.56
SORT1-203ENST00000471996 WDR62O43379 1518 aa37.24■■■■□ 3.55
SORT1-203ENST00000471996 CEP164Q9UPV0 1460 aa37.02■■■■□ 3.52
SORT1-203ENST00000471996 OSCARQ8IYS5 282 aa36.97■■■■□ 3.51
SORT1-203ENST00000471996 WIZO95785 1651 aa36.94■■■■□ 3.5
SORT1-203ENST00000471996 FANCD2Q9BXW9 1451 aa36.93■■■■□ 3.5
SORT1-203ENST00000471996 CFTRP13569 1480 aa36.8■■■■□ 3.48
SORT1-203ENST00000471996 URB2Q14146 1524 aaKnown RBP36.66■■■■□ 3.46
SORT1-203ENST00000471996 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
SORT1-203ENST00000471996 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
SORT1-203ENST00000471996 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
SORT1-203ENST00000471996 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
SORT1-203ENST00000471996 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
SORT1-203ENST00000471996 ZNF608Q9ULD9 1512 aaPredicted RBP36.34■■■■□ 3.41
SORT1-203ENST00000471996 IFT140Q96RY7 1462 aa36.33■■■■□ 3.41
SORT1-203ENST00000471996 ARHGEF11O15085 1522 aa36.31■■■■□ 3.4
SORT1-203ENST00000471996 PRDM2Q13029 1718 aa36.18■■■■□ 3.38
SORT1-203ENST00000471996 CYB5RLQ6IPT4 315 aa36.14■■■■□ 3.38
SORT1-203ENST00000471996 TOPBP1Q92547 1522 aa36.13■■■■□ 3.38
SORT1-203ENST00000471996 CCDC88BA6NC98 1476 aa36.1■■■■□ 3.37
SORT1-203ENST00000471996 EIF4G3O43432 1585 aaKnown RBP36.04■■■■□ 3.36
SORT1-203ENST00000471996 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
SORT1-203ENST00000471996 TRHP20396 242 aaPredicted RBP35.96■■■■□ 3.35
SORT1-203ENST00000471996 AQRO60306 1485 aaKnown RBP eCLIP35.92■■■■□ 3.34
SORT1-203ENST00000471996 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
SORT1-203ENST00000471996 ARAP1Q96P48 1450 aa35.92■■■■□ 3.34
SORT1-203ENST00000471996 FBLN2P98095 1184 aa35.85■■■■□ 3.33
SORT1-203ENST00000471996 CHD1O14646 1710 aa35.85■■■■□ 3.33
SORT1-203ENST00000471996 TARBP1Q13395 1621 aaKnown RBP35.84■■■■□ 3.33
SORT1-203ENST00000471996 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
SORT1-203ENST00000471996 RAD54L2Q9Y4B4 1467 aa35.62■■■■□ 3.29
SORT1-203ENST00000471996 TDRD9Q8NDG6 1382 aaKnown RBP35.61■■■■□ 3.29
SORT1-203ENST00000471996 SOGA1O94964 1423 aa35.58■■■■□ 3.29
SORT1-203ENST00000471996 SNAPC4Q5SXM2 1469 aa35.52■■■■□ 3.28
SORT1-203ENST00000471996 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
SORT1-203ENST00000471996 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
SORT1-203ENST00000471996 WDR97A6NE52 1622 aa35.43■■■■□ 3.26
SORT1-203ENST00000471996 AEBP2Q6ZN18 517 aaPredicted RBP35.43■■■■□ 3.26
SORT1-203ENST00000471996 SYNJ1O43426 1573 aa35.42■■■■□ 3.26
SORT1-203ENST00000471996 MAGI1Q96QZ7 1491 aaPredicted RBP35.41■■■■□ 3.26
SORT1-203ENST00000471996 FGD5Q6ZNL6 1462 aa35.4■■■■□ 3.26
SORT1-203ENST00000471996 GRIN2BQ13224 1484 aa35.35■■■■□ 3.25
SORT1-203ENST00000471996 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
SORT1-203ENST00000471996 CUX1P39880 1505 aa35.25■■■■□ 3.23
SORT1-203ENST00000471996 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
SORT1-203ENST00000471996 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
SORT1-203ENST00000471996 ABCA10Q8WWZ4 1543 aa34.97■■■■□ 3.19
SORT1-203ENST00000471996 ABCA5Q8WWZ7 1642 aa34.93■■■■□ 3.18
SORT1-203ENST00000471996 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
SORT1-203ENST00000471996 GRIN2AQ12879 1464 aa34.87■■■■□ 3.17
SORT1-203ENST00000471996 NUP160Q12769 1436 aa34.81■■■■□ 3.16
SORT1-203ENST00000471996 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
SORT1-203ENST00000471996 ADAMTS12P58397 1594 aa34.72■■■■□ 3.15
SORT1-203ENST00000471996 WRNQ14191 1432 aaPredicted RBP eCLIP34.71■■■■□ 3.15
SORT1-203ENST00000471996 SHROOM2Q13796 1616 aa34.67■■■■□ 3.14
SORT1-203ENST00000471996 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
SORT1-203ENST00000471996 KIF13AQ9H1H9 1805 aa34.53■■■■□ 3.12
SORT1-203ENST00000471996 PRG4Q92954 1404 aaPredicted RBP34.53■■■■□ 3.12
SORT1-203ENST00000471996 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
SORT1-203ENST00000471996 JPH4Q96JJ6 628 aa34.49■■■■□ 3.11
SORT1-203ENST00000471996 TOP2BQ02880 1626 aa34.47■■■■□ 3.11
SORT1-203ENST00000471996 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
SORT1-203ENST00000471996 FAM69CQ0P6D2 419 aa34.43■■■■□ 3.1
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