RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 NISCHQ9Y2I1 1504 aa50.51■■■■■ 5.68
PPP1CA-202ENST00000358239 CCDC180Q9P1Z9 1646 aa45.26■■■■■ 4.84
PPP1CA-202ENST00000358239 ABCC9O60706 1549 aa44.38■■■■■ 4.69
PPP1CA-202ENST00000358239 RB1CC1Q8TDY2 1594 aa42.69■■■■■ 4.43
PPP1CA-202ENST00000358239 NACADO15069 1562 aa42.55■■■■■ 4.4
PPP1CA-202ENST00000358239 MYO15BQ96JP2 1530 aa42.19■■■■■ 4.34
PPP1CA-202ENST00000358239 DCAF8L2P0C7V8 631 aa42.16■■■■■ 4.34
PPP1CA-202ENST00000358239 ZCCHC6Q5VYS8 1495 aaKnown RBP42.01■■■■■ 4.32
PPP1CA-202ENST00000358239 DCAF1Q9Y4B6 1507 aa41.85■■■■■ 4.29
PPP1CA-202ENST00000358239 UNC13AQ9UPW8 1703 aa41.84■■■■■ 4.29
PPP1CA-202ENST00000358239 BICRAQ9NZM4 1560 aa41.35■■■■■ 4.21
PPP1CA-202ENST00000358239 PABPN1Q86U42 306 aaKnown RBP eCLIP41.3■■■■■ 4.2
PPP1CA-202ENST00000358239 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
PPP1CA-202ENST00000358239 SHROOM4Q9ULL8 1493 aa41■■■■■ 4.15
PPP1CA-202ENST00000358239 DNAJC5BQ9UF47 199 aa40.95■■■■■ 4.15
PPP1CA-202ENST00000358239 EIF4G1Q04637 1599 aaKnown RBP40.31■■■■■ 4.04
PPP1CA-202ENST00000358239 CC2D2AQ9P2K1 1620 aa40.24■■■■■ 4.03
PPP1CA-202ENST00000358239 CECR2Q9BXF3 1484 aa39.96■■■■□ 3.99
PPP1CA-202ENST00000358239 SMARCA4P51532 1647 aa39.33■■■■□ 3.89
PPP1CA-202ENST00000358239 BAZ1AQ9NRL2 1556 aaPredicted RBP39.23■■■■□ 3.87
PPP1CA-202ENST00000358239 NCAPD3P42695 1498 aa39.18■■■■□ 3.86
PPP1CA-202ENST00000358239 SMARCA2P51531 1590 aa39.16■■■■□ 3.86
PPP1CA-202ENST00000358239 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
PPP1CA-202ENST00000358239 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
PPP1CA-202ENST00000358239 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
PPP1CA-202ENST00000358239 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
PPP1CA-202ENST00000358239 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
PPP1CA-202ENST00000358239 WIZO95785 1651 aa38.51■■■■□ 3.76
PPP1CA-202ENST00000358239 ERCC6Q03468 1493 aa38.34■■■■□ 3.73
PPP1CA-202ENST00000358239 LAMC3Q9Y6N6 1575 aa38.3■■■■□ 3.72
PPP1CA-202ENST00000358239 NESP48681 1621 aa38.29■■■■□ 3.72
PPP1CA-202ENST00000358239 RSF1Q96T23 1441 aaPredicted RBP38.27■■■■□ 3.72
PPP1CA-202ENST00000358239 CUX2O14529 1486 aa38.12■■■■□ 3.69
PPP1CA-202ENST00000358239 TOP2AP11388 1531 aaKnown RBP38.09■■■■□ 3.69
PPP1CA-202ENST00000358239 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.68
PPP1CA-202ENST00000358239 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
PPP1CA-202ENST00000358239 PDS5BQ9NTI5 1447 aa37.96■■■■□ 3.67
PPP1CA-202ENST00000358239 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
PPP1CA-202ENST00000358239 CFTRP13569 1480 aa37.71■■■■□ 3.63
PPP1CA-202ENST00000358239 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
PPP1CA-202ENST00000358239 MRC2Q9UBG0 1479 aa37.61■■■■□ 3.61
PPP1CA-202ENST00000358239 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
PPP1CA-202ENST00000358239 FANCD2Q9BXW9 1451 aa37.57■■■■□ 3.6
PPP1CA-202ENST00000358239 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
PPP1CA-202ENST00000358239 WDR62O43379 1518 aa37.55■■■■□ 3.6
PPP1CA-202ENST00000358239 DNAJC5Q9H3Z4 198 aa37.27■■■■□ 3.56
PPP1CA-202ENST00000358239 URB2Q14146 1524 aaKnown RBP37.2■■■■□ 3.55
PPP1CA-202ENST00000358239 ABCC8Q09428 1581 aa37■■■■□ 3.51
PPP1CA-202ENST00000358239 TOPBP1Q92547 1522 aa36.94■■■■□ 3.5
PPP1CA-202ENST00000358239 DNMBPQ6XZF7 1577 aa36.92■■■■□ 3.5
PPP1CA-202ENST00000358239 SUPT5HO00267 1087 aaKnown RBP36.91■■■■□ 3.5
PPP1CA-202ENST00000358239 IFT140Q96RY7 1462 aa36.82■■■■□ 3.48
PPP1CA-202ENST00000358239 TARBP1Q13395 1621 aaKnown RBP36.63■■■■□ 3.45
PPP1CA-202ENST00000358239 ZNF608Q9ULD9 1512 aaPredicted RBP36.61■■■■□ 3.45
PPP1CA-202ENST00000358239 POLA1P09884 1462 aaPredicted RBP36.59■■■■□ 3.45
PPP1CA-202ENST00000358239 EIF4G3O43432 1585 aaKnown RBP36.58■■■■□ 3.45
PPP1CA-202ENST00000358239 CUX1P39880 1505 aa36.5■■■■□ 3.43
PPP1CA-202ENST00000358239 FGD5Q6ZNL6 1462 aa36.45■■■■□ 3.43
PPP1CA-202ENST00000358239 WDR97A6NE52 1622 aa36.42■■■■□ 3.42
PPP1CA-202ENST00000358239 SOGA1O94964 1423 aa36.4■■■■□ 3.42
PPP1CA-202ENST00000358239 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
PPP1CA-202ENST00000358239 OSCARQ8IYS5 282 aa36.37■■■■□ 3.41
PPP1CA-202ENST00000358239 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.417e-8■■■■■ 41.6
PPP1CA-202ENST00000358239 CHD1O14646 1710 aa36.25■■■■□ 3.39
PPP1CA-202ENST00000358239 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
PPP1CA-202ENST00000358239 TOP2BQ02880 1626 aa36.19■■■■□ 3.38
PPP1CA-202ENST00000358239 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
PPP1CA-202ENST00000358239 WRNQ14191 1432 aaPredicted RBP eCLIP36.13■■■■□ 3.37
PPP1CA-202ENST00000358239 PBRM1Q86U86 1689 aa36.13■■■■□ 3.37
PPP1CA-202ENST00000358239 ABCA10Q8WWZ4 1543 aa36.1■■■■□ 3.37
PPP1CA-202ENST00000358239 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
PPP1CA-202ENST00000358239 GRIN2BQ13224 1484 aa36.06■■■■□ 3.36
PPP1CA-202ENST00000358239 ABCA5Q8WWZ7 1642 aa36.06■■■■□ 3.36
PPP1CA-202ENST00000358239 MAGI1Q96QZ7 1491 aaPredicted RBP36.05■■■■□ 3.36
PPP1CA-202ENST00000358239 SNAPC4Q5SXM2 1469 aa36.05■■■■□ 3.36
PPP1CA-202ENST00000358239 GAPVD1Q14C86 1478 aa36.01■■■■□ 3.36
PPP1CA-202ENST00000358239 RIMBP3CA6NJZ7 1639 aa35.94■■■■□ 3.34
PPP1CA-202ENST00000358239 RIMBP3BA6NNM3 1639 aa35.94■■■■□ 3.34
PPP1CA-202ENST00000358239 RIMBP3Q9UFD9 1639 aa35.94■■■■□ 3.34
PPP1CA-202ENST00000358239 FBLN2P98095 1184 aa35.93■■■■□ 3.34
PPP1CA-202ENST00000358239 SYNJ2O15056 1496 aa35.9■■■■□ 3.34
PPP1CA-202ENST00000358239 ARHGEF11O15085 1522 aa35.85■■■■□ 3.33
PPP1CA-202ENST00000358239 CHMP7Q8WUX9 453 aaPredicted RBP35.82■■■■□ 3.32
PPP1CA-202ENST00000358239 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
PPP1CA-202ENST00000358239 CLASP1Q7Z460 1538 aa35.76■■■■□ 3.31
PPP1CA-202ENST00000358239 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
PPP1CA-202ENST00000358239 ERICH3Q5RHP9 1530 aa35.71■■■■□ 3.31
PPP1CA-202ENST00000358239 GRIN2AQ12879 1464 aa35.61■■■■□ 3.29
PPP1CA-202ENST00000358239 FHAD1B1AJZ9 1412 aa35.58■■■■□ 3.29
PPP1CA-202ENST00000358239 ARAP1Q96P48 1450 aa35.49■■■■□ 3.27
PPP1CA-202ENST00000358239 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
PPP1CA-202ENST00000358239 NUP160Q12769 1436 aa35.45■■■■□ 3.27
PPP1CA-202ENST00000358239 KIF27Q86VH2 1401 aa35.42■■■■□ 3.26
PPP1CA-202ENST00000358239 CYB5RLQ6IPT4 315 aa35.42■■■■□ 3.26
PPP1CA-202ENST00000358239 CUL7Q14999 1698 aa35.39■■■■□ 3.26
PPP1CA-202ENST00000358239 SHROOM2Q13796 1616 aa35.34■■■■□ 3.25
PPP1CA-202ENST00000358239 IGF1RP08069 1367 aa35.24■■■■□ 3.23
PPP1CA-202ENST00000358239 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
PPP1CA-202ENST00000358239 ERCC6L2Q5T890 1561 aa35.16■■■■□ 3.22
PPP1CA-202ENST00000358239 CARMIL1Q5VZK9 1371 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms