RNA–Protein interactions for RNA: ENST00000556428.5

SNW1-206, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-206ENST00000556428 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
SNW1-206ENST00000556428 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
SNW1-206ENST00000556428 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
SNW1-206ENST00000556428 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
SNW1-206ENST00000556428 ABCC9O60706 1549 aa14.04□□□□□ -0.16
SNW1-206ENST00000556428 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
SNW1-206ENST00000556428 NACADO15069 1562 aa13.38□□□□□ -0.27
SNW1-206ENST00000556428 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
SNW1-206ENST00000556428 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
SNW1-206ENST00000556428 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
SNW1-206ENST00000556428 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
SNW1-206ENST00000556428 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
SNW1-206ENST00000556428 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
SNW1-206ENST00000556428 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
SNW1-206ENST00000556428 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
SNW1-206ENST00000556428 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNW1-206ENST00000556428 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
SNW1-206ENST00000556428 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
SNW1-206ENST00000556428 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
SNW1-206ENST00000556428 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
SNW1-206ENST00000556428 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
SNW1-206ENST00000556428 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
SNW1-206ENST00000556428 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
SNW1-206ENST00000556428 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
SNW1-206ENST00000556428 FOXD1Q16676 465 aa12.46□□□□□ -0.41
SNW1-206ENST00000556428 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
SNW1-206ENST00000556428 MYT1Q01538 1121 aa12.42□□□□□ -0.42
SNW1-206ENST00000556428 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
SNW1-206ENST00000556428 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
SNW1-206ENST00000556428 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
SNW1-206ENST00000556428 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
SNW1-206ENST00000556428 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
SNW1-206ENST00000556428 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
SNW1-206ENST00000556428 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
SNW1-206ENST00000556428 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
SNW1-206ENST00000556428 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
SNW1-206ENST00000556428 WIZO95785 1651 aa12.18□□□□□ -0.46
SNW1-206ENST00000556428 NESP48681 1621 aa12.13□□□□□ -0.47
SNW1-206ENST00000556428 HRCP23327 699 aa12.12□□□□□ -0.47
SNW1-206ENST00000556428 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
SNW1-206ENST00000556428 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
SNW1-206ENST00000556428 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
SNW1-206ENST00000556428 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
SNW1-206ENST00000556428 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
SNW1-206ENST00000556428 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
SNW1-206ENST00000556428 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
SNW1-206ENST00000556428 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
SNW1-206ENST00000556428 CUX2O14529 1486 aa11.98□□□□□ -0.49
SNW1-206ENST00000556428 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
SNW1-206ENST00000556428 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.5
SNW1-206ENST00000556428 CFTRP13569 1480 aa11.91□□□□□ -0.5
SNW1-206ENST00000556428 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
SNW1-206ENST00000556428 CCDC88BA6NC98 1476 aa11.88□□□□□ -0.51
SNW1-206ENST00000556428 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
SNW1-206ENST00000556428 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
SNW1-206ENST00000556428 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
SNW1-206ENST00000556428 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
SNW1-206ENST00000556428 WDR62O43379 1518 aa11.84□□□□□ -0.51
SNW1-206ENST00000556428 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
SNW1-206ENST00000556428 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
SNW1-206ENST00000556428 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
SNW1-206ENST00000556428 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
SNW1-206ENST00000556428 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
SNW1-206ENST00000556428 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
SNW1-206ENST00000556428 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
SNW1-206ENST00000556428 KCNA4P22459 653 aa11.68□□□□□ -0.54
SNW1-206ENST00000556428 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
SNW1-206ENST00000556428 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.55
SNW1-206ENST00000556428 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
SNW1-206ENST00000556428 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
SNW1-206ENST00000556428 MSH5O43196 834 aa11.61□□□□□ -0.55
SNW1-206ENST00000556428 PIAS4Q8N2W9 510 aaPredicted RBP11.61□□□□□ -0.55
SNW1-206ENST00000556428 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
SNW1-206ENST00000556428 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
SNW1-206ENST00000556428 ADRA2BP18089 450 aa11.59□□□□□ -0.55
SNW1-206ENST00000556428 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
SNW1-206ENST00000556428 TARBP1Q13395 1621 aaKnown RBP11.56□□□□□ -0.56
SNW1-206ENST00000556428 EIF4G3O43432 1585 aaKnown RBP11.55□□□□□ -0.56
SNW1-206ENST00000556428 CUX1P39880 1505 aa11.55□□□□□ -0.56
SNW1-206ENST00000556428 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
SNW1-206ENST00000556428 RAD54L2Q9Y4B4 1467 aa11.52□□□□□ -0.56
SNW1-206ENST00000556428 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
SNW1-206ENST00000556428 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■□ 20.4
SNW1-206ENST00000556428 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
SNW1-206ENST00000556428 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SNW1-206ENST00000556428 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
SNW1-206ENST00000556428 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.58
SNW1-206ENST00000556428 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
SNW1-206ENST00000556428 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
SNW1-206ENST00000556428 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
SNW1-206ENST00000556428 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SNW1-206ENST00000556428 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
SNW1-206ENST00000556428 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
SNW1-206ENST00000556428 CHD1O14646 1710 aa11.42□□□□□ -0.58
SNW1-206ENST00000556428 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
SNW1-206ENST00000556428 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
SNW1-206ENST00000556428 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
SNW1-206ENST00000556428 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.59
SNW1-206ENST00000556428 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
SNW1-206ENST00000556428 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms