RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
TMEM258-207ENST00000543510 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
TMEM258-207ENST00000543510 ABCC9O60706 1549 aa29.22■■■□□ 2.27
TMEM258-207ENST00000543510 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
TMEM258-207ENST00000543510 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
TMEM258-207ENST00000543510 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
TMEM258-207ENST00000543510 NACADO15069 1562 aa28.39■■■□□ 2.14
TMEM258-207ENST00000543510 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
TMEM258-207ENST00000543510 RB1CC1Q8TDY2 1594 aa28.31■■■□□ 2.12
TMEM258-207ENST00000543510 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
TMEM258-207ENST00000543510 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
TMEM258-207ENST00000543510 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
TMEM258-207ENST00000543510 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
TMEM258-207ENST00000543510 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
TMEM258-207ENST00000543510 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
TMEM258-207ENST00000543510 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
TMEM258-207ENST00000543510 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
TMEM258-207ENST00000543510 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
TMEM258-207ENST00000543510 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
TMEM258-207ENST00000543510 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
TMEM258-207ENST00000543510 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
TMEM258-207ENST00000543510 WIZO95785 1651 aa26.54■■□□□ 1.84
TMEM258-207ENST00000543510 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
TMEM258-207ENST00000543510 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
TMEM258-207ENST00000543510 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
TMEM258-207ENST00000543510 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
TMEM258-207ENST00000543510 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
TMEM258-207ENST00000543510 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
TMEM258-207ENST00000543510 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
TMEM258-207ENST00000543510 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
TMEM258-207ENST00000543510 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
TMEM258-207ENST00000543510 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
TMEM258-207ENST00000543510 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
TMEM258-207ENST00000543510 NESP48681 1621 aa25.49■■□□□ 1.67
TMEM258-207ENST00000543510 CFTRP13569 1480 aa25.47■■□□□ 1.67
TMEM258-207ENST00000543510 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
TMEM258-207ENST00000543510 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
TMEM258-207ENST00000543510 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
TMEM258-207ENST00000543510 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
TMEM258-207ENST00000543510 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
TMEM258-207ENST00000543510 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
TMEM258-207ENST00000543510 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
TMEM258-207ENST00000543510 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
TMEM258-207ENST00000543510 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
TMEM258-207ENST00000543510 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.619e-6■■■■■ 50.1
TMEM258-207ENST00000543510 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
TMEM258-207ENST00000543510 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
TMEM258-207ENST00000543510 CUX1P39880 1505 aa25.02■■□□□ 1.6
TMEM258-207ENST00000543510 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
TMEM258-207ENST00000543510 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
TMEM258-207ENST00000543510 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.59
TMEM258-207ENST00000543510 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
TMEM258-207ENST00000543510 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
TMEM258-207ENST00000543510 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
TMEM258-207ENST00000543510 THOC2Q8NI27 1593 aaKnown RBP24.86■■□□□ 1.57
TMEM258-207ENST00000543510 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
TMEM258-207ENST00000543510 WDR62O43379 1518 aa24.81■■□□□ 1.56
TMEM258-207ENST00000543510 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
TMEM258-207ENST00000543510 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
TMEM258-207ENST00000543510 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
TMEM258-207ENST00000543510 SOGA1O94964 1423 aa24.7■■□□□ 1.54
TMEM258-207ENST00000543510 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
TMEM258-207ENST00000543510 CUX2O14529 1486 aa24.62■■□□□ 1.53
TMEM258-207ENST00000543510 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
TMEM258-207ENST00000543510 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
TMEM258-207ENST00000543510 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
TMEM258-207ENST00000543510 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
TMEM258-207ENST00000543510 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
TMEM258-207ENST00000543510 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
TMEM258-207ENST00000543510 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
TMEM258-207ENST00000543510 EEA1Q15075 1411 aa24.49■■□□□ 1.51
TMEM258-207ENST00000543510 ZNF608Q9ULD9 1512 aaPredicted RBP24.46■■□□□ 1.51
TMEM258-207ENST00000543510 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
TMEM258-207ENST00000543510 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.51e-6■■■■□ 24.7
TMEM258-207ENST00000543510 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
TMEM258-207ENST00000543510 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
TMEM258-207ENST00000543510 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
TMEM258-207ENST00000543510 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
TMEM258-207ENST00000543510 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
TMEM258-207ENST00000543510 IGF1RP08069 1367 aa24.32■■□□□ 1.48
TMEM258-207ENST00000543510 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
TMEM258-207ENST00000543510 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
TMEM258-207ENST00000543510 CUL7Q14999 1698 aa24.25■■□□□ 1.47
TMEM258-207ENST00000543510 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
TMEM258-207ENST00000543510 KIF21BO75037 1637 aa24.24■■□□□ 1.47
TMEM258-207ENST00000543510 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
TMEM258-207ENST00000543510 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
TMEM258-207ENST00000543510 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
TMEM258-207ENST00000543510 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
TMEM258-207ENST00000543510 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
TMEM258-207ENST00000543510 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
TMEM258-207ENST00000543510 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
TMEM258-207ENST00000543510 FBLN2P98095 1184 aa24.12■■□□□ 1.45
TMEM258-207ENST00000543510 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
TMEM258-207ENST00000543510 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
TMEM258-207ENST00000543510 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
TMEM258-207ENST00000543510 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
TMEM258-207ENST00000543510 CHD1O14646 1710 aa24.01■■□□□ 1.43
TMEM258-207ENST00000543510 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
TMEM258-207ENST00000543510 TNIKQ9UKE5 1360 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms