RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
ITGA5-211ENST00000552564 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
ITGA5-211ENST00000552564 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.2
ITGA5-211ENST00000552564 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
ITGA5-211ENST00000552564 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
ITGA5-211ENST00000552564 APLP2Q06481 763 aa21.84■■□□□ 1.09
ITGA5-211ENST00000552564 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
ITGA5-211ENST00000552564 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
ITGA5-211ENST00000552564 MYT1Q01538 1121 aa21.58■■□□□ 1.04
ITGA5-211ENST00000552564 CCER1Q8TC90 406 aaPredicted RBP21.48■■□□□ 1.03
ITGA5-211ENST00000552564 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
ITGA5-211ENST00000552564 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
ITGA5-211ENST00000552564 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.02
ITGA5-211ENST00000552564 ERICH6Q7L0X2 663 aa21.33■■□□□ 1
ITGA5-211ENST00000552564 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
ITGA5-211ENST00000552564 NEFLP07196 543 aa21.03■□□□□ 0.96
ITGA5-211ENST00000552564 TTBK1Q5TCY1 1321 aaPredicted RBP20.91■□□□□ 0.94
ITGA5-211ENST00000552564 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
ITGA5-211ENST00000552564 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
ITGA5-211ENST00000552564 HRCP23327 699 aa20.73■□□□□ 0.91
ITGA5-211ENST00000552564 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
ITGA5-211ENST00000552564 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
ITGA5-211ENST00000552564 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
ITGA5-211ENST00000552564 DAXXQ9UER7 740 aaPredicted RBP20.38■□□□□ 0.85
ITGA5-211ENST00000552564 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.84
ITGA5-211ENST00000552564 ABCC9O60706 1549 aa20.19■□□□□ 0.82
ITGA5-211ENST00000552564 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
ITGA5-211ENST00000552564 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
ITGA5-211ENST00000552564 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
ITGA5-211ENST00000552564 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.8
ITGA5-211ENST00000552564 RTL5Q5HYW3 569 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-211ENST00000552564 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
ITGA5-211ENST00000552564 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
ITGA5-211ENST00000552564 ITGAEP38570 1179 aa19.97■□□□□ 0.79
ITGA5-211ENST00000552564 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
ITGA5-211ENST00000552564 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
ITGA5-211ENST00000552564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
ITGA5-211ENST00000552564 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
ITGA5-211ENST00000552564 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
ITGA5-211ENST00000552564 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
ITGA5-211ENST00000552564 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
ITGA5-211ENST00000552564 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
ITGA5-211ENST00000552564 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
ITGA5-211ENST00000552564 ANP32CO43423 234 aa19.68■□□□□ 0.74
ITGA5-211ENST00000552564 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
ITGA5-211ENST00000552564 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
ITGA5-211ENST00000552564 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
ITGA5-211ENST00000552564 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
ITGA5-211ENST00000552564 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
ITGA5-211ENST00000552564 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
ITGA5-211ENST00000552564 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
ITGA5-211ENST00000552564 BCANQ96GW7 911 aa19.41■□□□□ 0.7
ITGA5-211ENST00000552564 ANP32AP39687 249 aaKnown RBP19.4■□□□□ 0.7
ITGA5-211ENST00000552564 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
ITGA5-211ENST00000552564 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
ITGA5-211ENST00000552564 NACADO15069 1562 aa19.33■□□□□ 0.68
ITGA5-211ENST00000552564 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
ITGA5-211ENST00000552564 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
ITGA5-211ENST00000552564 NEFMP07197 916 aa19.21■□□□□ 0.67
ITGA5-211ENST00000552564 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
ITGA5-211ENST00000552564 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
ITGA5-211ENST00000552564 ANP32BQ92688 251 aaKnown RBP19.12■□□□□ 0.65
ITGA5-211ENST00000552564 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
ITGA5-211ENST00000552564 FKBP8Q14318 412 aa19.06■□□□□ 0.64
ITGA5-211ENST00000552564 UPF2Q9HAU5 1272 aaKnown RBP19.04■□□□□ 0.64
ITGA5-211ENST00000552564 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
ITGA5-211ENST00000552564 EEA1Q15075 1411 aa18.96■□□□□ 0.63
ITGA5-211ENST00000552564 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
ITGA5-211ENST00000552564 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
ITGA5-211ENST00000552564 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
ITGA5-211ENST00000552564 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.94■□□□□ 0.62
ITGA5-211ENST00000552564 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
ITGA5-211ENST00000552564 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
ITGA5-211ENST00000552564 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
ITGA5-211ENST00000552564 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
ITGA5-211ENST00000552564 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
ITGA5-211ENST00000552564 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
ITGA5-211ENST00000552564 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
ITGA5-211ENST00000552564 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
ITGA5-211ENST00000552564 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
ITGA5-211ENST00000552564 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
ITGA5-211ENST00000552564 FBLN2P98095 1184 aa18.79■□□□□ 0.6
ITGA5-211ENST00000552564 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
ITGA5-211ENST00000552564 ANP32EQ9BTT0 268 aa18.78■□□□□ 0.6
ITGA5-211ENST00000552564 CLIP1P30622 1438 aa18.76■□□□□ 0.59
ITGA5-211ENST00000552564 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
ITGA5-211ENST00000552564 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
ITGA5-211ENST00000552564 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
ITGA5-211ENST00000552564 DDRGK1Q96HY6 314 aa18.74■□□□□ 0.59
ITGA5-211ENST00000552564 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
ITGA5-211ENST00000552564 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
ITGA5-211ENST00000552564 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
ITGA5-211ENST00000552564 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
ITGA5-211ENST00000552564 MIER1Q8N108 512 aa18.67■□□□□ 0.58
ITGA5-211ENST00000552564 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
ITGA5-211ENST00000552564 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
ITGA5-211ENST00000552564 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
ITGA5-211ENST00000552564 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
ITGA5-211ENST00000552564 BECN1Q14457 450 aa18.64■□□□□ 0.58
ITGA5-211ENST00000552564 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms