RNA–Protein interactions for RNA: ENST00000598441.5

SNRNP70-206, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP70, Length 1,574 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-206ENST00000598441 NISCHQ9Y2I1 1504 aa55.97■■■■■ 6.55
SNRNP70-206ENST00000598441 CCDC180Q9P1Z9 1646 aa49.66■■■■■ 5.54
SNRNP70-206ENST00000598441 ABCC9O60706 1549 aa48.51■■■■■ 5.36
SNRNP70-206ENST00000598441 DCAF8L2P0C7V8 631 aa46.91■■■■■ 5.1
SNRNP70-206ENST00000598441 RB1CC1Q8TDY2 1594 aa46.71■■■■■ 5.07
SNRNP70-206ENST00000598441 NACADO15069 1562 aa46.67■■■■■ 5.06
SNRNP70-206ENST00000598441 ZCCHC6Q5VYS8 1495 aaKnown RBP46.64■■■■■ 5.06
SNRNP70-206ENST00000598441 MYO15BQ96JP2 1530 aa46.38■■■■■ 5.02
SNRNP70-206ENST00000598441 DCAF1Q9Y4B6 1507 aa46.27■■■■■ 5
SNRNP70-206ENST00000598441 UNC13AQ9UPW8 1703 aa45.61■■■■■ 4.89
SNRNP70-206ENST00000598441 SCRIBQ14160 1630 aa45.41■■■■■ 4.86
SNRNP70-206ENST00000598441 PABPN1Q86U42 306 aaKnown RBP eCLIP45.4■■■■■ 4.862e-12■■■■□ 21.5
SNRNP70-206ENST00000598441 BICRAQ9NZM4 1560 aa45.22■■■■■ 4.83
SNRNP70-206ENST00000598441 SHROOM4Q9ULL8 1493 aa44.76■■■■■ 4.76
SNRNP70-206ENST00000598441 DNAJC5BQ9UF47 199 aa44.31■■■■■ 4.68
SNRNP70-206ENST00000598441 EIF4G1Q04637 1599 aaKnown RBP44.06■■■■■ 4.64
SNRNP70-206ENST00000598441 CC2D2AQ9P2K1 1620 aa43.85■■■■■ 4.61
SNRNP70-206ENST00000598441 CECR2Q9BXF3 1484 aa43.59■■■■■ 4.57
SNRNP70-206ENST00000598441 SMARCA4P51532 1647 aa43.4■■■■■ 4.54
SNRNP70-206ENST00000598441 BAZ1AQ9NRL2 1556 aaPredicted RBP43.4■■■■■ 4.54
SNRNP70-206ENST00000598441 MROH2BQ7Z745 1585 aa43.15■■■■■ 4.5
SNRNP70-206ENST00000598441 ATAD2BQ9ULI0 1458 aa43.11■■■■■ 4.49
SNRNP70-206ENST00000598441 SMARCA2P51531 1590 aa43.09■■■■■ 4.49
SNRNP70-206ENST00000598441 NCAPD3P42695 1498 aa43.04■■■■■ 4.48
SNRNP70-206ENST00000598441 PEG3Q9GZU2 1588 aa42.91■■■■■ 4.46
SNRNP70-206ENST00000598441 HMGXB3Q12766 1538 aa42.85■■■■■ 4.45
SNRNP70-206ENST00000598441 BAZ1BQ9UIG0 1483 aaKnown RBP42.83■■■■■ 4.45
SNRNP70-206ENST00000598441 RSF1Q96T23 1441 aaPredicted RBP42.73■■■■■ 4.43
SNRNP70-206ENST00000598441 WIZO95785 1651 aa42.72■■■■■ 4.43
SNRNP70-206ENST00000598441 TOP2AP11388 1531 aaKnown RBP42.25■■■■■ 4.35
SNRNP70-206ENST00000598441 NESP48681 1621 aa42■■■■■ 4.31
SNRNP70-206ENST00000598441 SUPT5HO00267 1087 aaKnown RBP41.95■■■■■ 4.31
SNRNP70-206ENST00000598441 LAMC3Q9Y6N6 1575 aa41.91■■■■■ 4.3
SNRNP70-206ENST00000598441 ERCC6Q03468 1493 aa41.85■■■■■ 4.29
SNRNP70-206ENST00000598441 CADPSQ9ULU8 1353 aa41.85■■■■■ 4.29
SNRNP70-206ENST00000598441 CCDC88BA6NC98 1476 aa41.77■■■■■ 4.28
SNRNP70-206ENST00000598441 PDS5BQ9NTI5 1447 aa41.67■■■■■ 4.26
SNRNP70-206ENST00000598441 CFTRP13569 1480 aa41.61■■■■■ 4.25
SNRNP70-206ENST00000598441 KIF21AQ7Z4S6 1674 aa41.51■■■■■ 4.24
SNRNP70-206ENST00000598441 FANCD2Q9BXW9 1451 aa41.38■■■■■ 4.21
SNRNP70-206ENST00000598441 CEP164Q9UPV0 1460 aa41.32■■■■■ 4.21
SNRNP70-206ENST00000598441 PRDM2Q13029 1718 aa41.31■■■■■ 4.2
SNRNP70-206ENST00000598441 THOC2Q8NI27 1593 aaKnown RBP41.27■■■■■ 4.2
SNRNP70-206ENST00000598441 CUX2O14529 1486 aa41.24■■■■■ 4.19
SNRNP70-206ENST00000598441 MRC2Q9UBG0 1479 aa41.2■■■■■ 4.19
SNRNP70-206ENST00000598441 WDR62O43379 1518 aa41.02■■■■■ 4.16
SNRNP70-206ENST00000598441 URB2Q14146 1524 aaKnown RBP40.92■■■■■ 4.14
SNRNP70-206ENST00000598441 ABCC8Q09428 1581 aa40.74■■■■■ 4.11
SNRNP70-206ENST00000598441 TOPBP1Q92547 1522 aa40.72■■■■■ 4.11
SNRNP70-206ENST00000598441 DNMBPQ6XZF7 1577 aa40.68■■■■■ 4.1
SNRNP70-206ENST00000598441 CUX1P39880 1505 aa40.47■■■■■ 4.07
SNRNP70-206ENST00000598441 IFT140Q96RY7 1462 aa40.43■■■■■ 4.06
SNRNP70-206ENST00000598441 POLA1P09884 1462 aaPredicted RBP40.38■■■■■ 4.06
SNRNP70-206ENST00000598441 FGD5Q6ZNL6 1462 aa40.33■■■■■ 4.05
SNRNP70-206ENST00000598441 WRNQ14191 1432 aaPredicted RBP eCLIP40.32■■■■■ 4.059e-10■■□□□ 11.7
SNRNP70-206ENST00000598441 SOGA1O94964 1423 aa40.26■■■■■ 4.04
SNRNP70-206ENST00000598441 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
SNRNP70-206ENST00000598441 ZNF608Q9ULD9 1512 aaPredicted RBP40.22■■■■■ 4.03
SNRNP70-206ENST00000598441 TARBP1Q13395 1621 aaKnown RBP40.22■■■■■ 4.03
SNRNP70-206ENST00000598441 SYNJ1O43426 1573 aa40.18■■■■■ 4.02
SNRNP70-206ENST00000598441 TOP2BQ02880 1626 aa40.17■■■■■ 4.02
SNRNP70-206ENST00000598441 BIVM-ERCC5R4GMW8 1640 aa40.15■■■■■ 4.02
SNRNP70-206ENST00000598441 EIF4G3O43432 1585 aaKnown RBP40.07■■■■■ 4.01
SNRNP70-206ENST00000598441 AQRO60306 1485 aaKnown RBP eCLIP40.05■■■■■ 46e-9■■■■■ 36.7
SNRNP70-206ENST00000598441 TDRD9Q8NDG6 1382 aaKnown RBP40.03■■■■■ 4
SNRNP70-206ENST00000598441 WDR97A6NE52 1622 aa39.92■■■■□ 3.98
SNRNP70-206ENST00000598441 ABCA10Q8WWZ4 1543 aa39.92■■■■□ 3.98
SNRNP70-206ENST00000598441 DNAJC5Q9H3Z4 198 aa39.8■■■■□ 3.96
SNRNP70-206ENST00000598441 GAPVD1Q14C86 1478 aa39.79■■■■□ 3.96
SNRNP70-206ENST00000598441 GRIN2BQ13224 1484 aa39.75■■■■□ 3.95
SNRNP70-206ENST00000598441 ABCA5Q8WWZ7 1642 aa39.73■■■■□ 3.95
SNRNP70-206ENST00000598441 PBRM1Q86U86 1689 aa39.68■■■■□ 3.94
SNRNP70-206ENST00000598441 SNAPC4Q5SXM2 1469 aa39.68■■■■□ 3.94
SNRNP70-206ENST00000598441 FBLN2P98095 1184 aa39.67■■■■□ 3.94
SNRNP70-206ENST00000598441 OSCARQ8IYS5 282 aa39.66■■■■□ 3.94
SNRNP70-206ENST00000598441 MAGI1Q96QZ7 1491 aaPredicted RBP39.61■■■■□ 3.93
SNRNP70-206ENST00000598441 TRIM41Q8WV44 630 aa39.59■■■■□ 3.93
SNRNP70-206ENST00000598441 CHD1O14646 1710 aa39.55■■■■□ 3.92
SNRNP70-206ENST00000598441 CHMP7Q8WUX9 453 aaPredicted RBP39.54■■■■□ 3.92
SNRNP70-206ENST00000598441 KIF27Q86VH2 1401 aa39.48■■■■□ 3.91
SNRNP70-206ENST00000598441 SYNJ2O15056 1496 aa39.47■■■■□ 3.91
SNRNP70-206ENST00000598441 ERICH3Q5RHP9 1530 aa39.45■■■■□ 3.91
SNRNP70-206ENST00000598441 ADAMTS12P58397 1594 aa39.35■■■■□ 3.89
SNRNP70-206ENST00000598441 FHAD1B1AJZ9 1412 aa39.33■■■■□ 3.89
SNRNP70-206ENST00000598441 IGF1RP08069 1367 aa39.26■■■■□ 3.88
SNRNP70-206ENST00000598441 GRIN2AQ12879 1464 aa39.23■■■■□ 3.87
SNRNP70-206ENST00000598441 CHIC1Q5VXU3 224 aa39.16■■■■□ 3.86
SNRNP70-206ENST00000598441 CUL7Q14999 1698 aa39.15■■■■□ 3.86
SNRNP70-206ENST00000598441 RUSC2Q8N2Y8 1516 aa39.15■■■■□ 3.86
SNRNP70-206ENST00000598441 CLASP1Q7Z460 1538 aa39.07■■■■□ 3.84
SNRNP70-206ENST00000598441 CARMIL1Q5VZK9 1371 aa39.06■■■■□ 3.84
SNRNP70-206ENST00000598441 CEP170Q5SW79 1584 aa39.01■■■■□ 3.84
SNRNP70-206ENST00000598441 NUP160Q12769 1436 aa39.01■■■■□ 3.84
SNRNP70-206ENST00000598441 ARHGEF11O15085 1522 aa38.95■■■■□ 3.83
SNRNP70-206ENST00000598441 RIMBP3CA6NJZ7 1639 aa38.93■■■■□ 3.82
SNRNP70-206ENST00000598441 RIMBP3BA6NNM3 1639 aa38.93■■■■□ 3.82
SNRNP70-206ENST00000598441 RIMBP3Q9UFD9 1639 aa38.93■■■■□ 3.82
SNRNP70-206ENST00000598441 RAPGEF2Q9Y4G8 1499 aa38.84■■■■□ 3.81
SNRNP70-206ENST00000598441 EEA1Q15075 1411 aa38.82■■■■□ 3.81
SNRNP70-206ENST00000598441 FAM9AQ8IZU1 332 aaPredicted RBP38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms