RNA–Protein interactions for RNA: ENST00000380359.3

NET1-202, Transcript of neuroepithelial cell transforming 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NET1, Length 3,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NET1-202ENST00000380359 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
NET1-202ENST00000380359 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
NET1-202ENST00000380359 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
NET1-202ENST00000380359 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
NET1-202ENST00000380359 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
NET1-202ENST00000380359 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
NET1-202ENST00000380359 ABCC9O60706 1549 aa17.53■□□□□ 0.4
NET1-202ENST00000380359 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
NET1-202ENST00000380359 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
NET1-202ENST00000380359 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
NET1-202ENST00000380359 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
NET1-202ENST00000380359 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
NET1-202ENST00000380359 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
NET1-202ENST00000380359 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
NET1-202ENST00000380359 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
NET1-202ENST00000380359 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
NET1-202ENST00000380359 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
NET1-202ENST00000380359 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
NET1-202ENST00000380359 NACADO15069 1562 aa16.78■□□□□ 0.28
NET1-202ENST00000380359 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
NET1-202ENST00000380359 RB1CC1Q8TDY2 1594 aa16.71■□□□□ 0.26
NET1-202ENST00000380359 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
NET1-202ENST00000380359 WIZO95785 1651 aa16.57■□□□□ 0.24
NET1-202ENST00000380359 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
NET1-202ENST00000380359 TTBK1Q5TCY1 1321 aaPredicted RBP16.47■□□□□ 0.23
NET1-202ENST00000380359 BAZ1AQ9NRL2 1556 aaPredicted RBP16.36■□□□□ 0.21
NET1-202ENST00000380359 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
NET1-202ENST00000380359 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
NET1-202ENST00000380359 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
NET1-202ENST00000380359 HRCP23327 699 aa16.26■□□□□ 0.19
NET1-202ENST00000380359 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
NET1-202ENST00000380359 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
NET1-202ENST00000380359 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
NET1-202ENST00000380359 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
NET1-202ENST00000380359 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
NET1-202ENST00000380359 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.18
NET1-202ENST00000380359 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
NET1-202ENST00000380359 SOGA1O94964 1423 aa16.08■□□□□ 0.16
NET1-202ENST00000380359 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
NET1-202ENST00000380359 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
NET1-202ENST00000380359 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
NET1-202ENST00000380359 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
NET1-202ENST00000380359 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
NET1-202ENST00000380359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
NET1-202ENST00000380359 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
NET1-202ENST00000380359 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
NET1-202ENST00000380359 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
NET1-202ENST00000380359 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
NET1-202ENST00000380359 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
NET1-202ENST00000380359 APLP2Q06481 763 aa15.72■□□□□ 0.11
NET1-202ENST00000380359 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
NET1-202ENST00000380359 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
NET1-202ENST00000380359 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
NET1-202ENST00000380359 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
NET1-202ENST00000380359 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
NET1-202ENST00000380359 CLIP1P30622 1438 aa15.62■□□□□ 0.09
NET1-202ENST00000380359 EEA1Q15075 1411 aa15.61■□□□□ 0.09
NET1-202ENST00000380359 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
NET1-202ENST00000380359 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
NET1-202ENST00000380359 ZEB1P37275 1124 aaPredicted RBP15.59■□□□□ 0.09
NET1-202ENST00000380359 P3H3Q8IVL6 736 aa15.58■□□□□ 0.09
NET1-202ENST00000380359 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
NET1-202ENST00000380359 ITGAEP38570 1179 aa15.58■□□□□ 0.08
NET1-202ENST00000380359 CUX1P39880 1505 aa15.5■□□□□ 0.07
NET1-202ENST00000380359 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
NET1-202ENST00000380359 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
NET1-202ENST00000380359 NESP48681 1621 aa15.47■□□□□ 0.07
NET1-202ENST00000380359 CUX2O14529 1486 aa15.47■□□□□ 0.07
NET1-202ENST00000380359 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
NET1-202ENST00000380359 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
NET1-202ENST00000380359 CFTRP13569 1480 aa15.45■□□□□ 0.06
NET1-202ENST00000380359 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
NET1-202ENST00000380359 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
NET1-202ENST00000380359 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
NET1-202ENST00000380359 KIF21BO75037 1637 aa15.37■□□□□ 0.05
NET1-202ENST00000380359 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
NET1-202ENST00000380359 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
NET1-202ENST00000380359 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
NET1-202ENST00000380359 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
NET1-202ENST00000380359 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
NET1-202ENST00000380359 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
NET1-202ENST00000380359 IGF1RP08069 1367 aa15.3■□□□□ 0.04
NET1-202ENST00000380359 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
NET1-202ENST00000380359 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
NET1-202ENST00000380359 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
NET1-202ENST00000380359 FAM50AQ14320 339 aaKnown RBP15.27■□□□□ 0.04
NET1-202ENST00000380359 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
NET1-202ENST00000380359 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
NET1-202ENST00000380359 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
NET1-202ENST00000380359 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
NET1-202ENST00000380359 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
NET1-202ENST00000380359 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
NET1-202ENST00000380359 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
NET1-202ENST00000380359 FBLN2P98095 1184 aa15.14■□□□□ 0.01
NET1-202ENST00000380359 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
NET1-202ENST00000380359 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
NET1-202ENST00000380359 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
NET1-202ENST00000380359 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
NET1-202ENST00000380359 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
NET1-202ENST00000380359 CCNB3Q8WWL7 1395 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms