Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 NAA10-202ENST00000370011 538 ntTSL 524.59■■□□□ 1.536e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.59■■□□□ 1.536e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-204ENST00000393710 525 ntTSL 224.59■■□□□ 1.536e-7■□□□□ 11.3
DROSHAQ9NRR4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.46e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-215ENST00000484950 873 ntTSL 223.12■■□□□ 1.296e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-212ENST00000477882 809 ntTSL 222.92■■□□□ 1.266e-7■□□□□ 11.3
DROSHAQ9NRR4 UBE2I-211ENST00000564143 444 ntTSL 321.06■□□□□ 0.966e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.866e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-208ENST00000465155 1626 ntTSL 220.38■□□□□ 0.856e-7■□□□□ 11.3
DROSHAQ9NRR4 ENO1-202ENST00000464920 2266 ntTSL 1 (best)19.6■□□□□ 0.736e-7■□□□□ 11.3
DROSHAQ9NRR4 TYMS-204ENST00000579128 925 ntTSL 219.47■□□□□ 0.716e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-205ENST00000393712 908 ntTSL 5 BASIC19.45■□□□□ 0.76e-7■□□□□ 11.3
DROSHAQ9NRR4 ENO1-206ENST00000497492 647 ntTSL 218.72■□□□□ 0.596e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC16.13■□□□□ 0.176e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.326e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-205ENST00000366985 516 ntTSL 512.5□□□□□ -0.416e-7■□□□□ 11.3
DROSHAQ9NRR4 ATF3-203ENST00000366981 680 ntTSL 1 (best)11.28□□□□□ -0.66e-7■□□□□ 11.3
DROSHAQ9NRR4 MAPK8-215ENST00000476134 732 ntTSL 32.97□□□□□ -1.936e-7■□□□□ 11.3
DROSHAQ9NRR4 TANGO2-223ENST00000484373 3109 ntTSL 419.17■□□□□ 0.665e-8■□□□□ 11.3
DROSHAQ9NRR4 VEGFA-221ENST00000520265 336 ntTSL 521.51■■□□□ 1.036e-8■□□□□ 11.3
DROSHAQ9NRR4 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)17.73■□□□□ 0.436e-8■□□□□ 11.3
DROSHAQ9NRR4 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)10.94□□□□□ -0.666e-8■□□□□ 11.3
DROSHAQ9NRR4 PFKP-212ENST00000607886 432 ntTSL 520.87■□□□□ 0.932e-6■□□□□ 11.3
DROSHAQ9NRR4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.211e-7■□□□□ 11.3
DROSHAQ9NRR4 SPRED2-205ENST00000440972 555 ntTSL 320.15■□□□□ 0.827e-7■□□□□ 11.3
DROSHAQ9NRR4 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC16.68■□□□□ 0.267e-7■□□□□ 11.3
DROSHAQ9NRR4 AL121845.2-202ENST00000476221 446 ntTSL 527.4■■□□□ 1.985e-8■□□□□ 11.3
DROSHAQ9NRR4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.355e-8■□□□□ 11.3
DROSHAQ9NRR4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC35■■■■□ 3.193e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-220ENST00000598108 1118 ntTSL 334.92■■■■□ 3.183e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC34.27■■■■□ 3.083e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC33.84■■■■□ 3.013e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.62■■■□□ 2.493e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC30.56■■■□□ 2.483e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-209ENST00000595034 739 ntTSL 328.56■■■□□ 2.163e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-205ENST00000593337 633 ntTSL 328.25■■■□□ 2.113e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-216ENST00000597180 301 ntTSL 527.85■■■□□ 2.053e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.993e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC27.36■■□□□ 1.973e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-230ENST00000601809 768 ntTSL 227.05■■□□□ 1.923e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-208ENST00000594387 800 ntTSL 326.46■■□□□ 1.833e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.63e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-226ENST00000600453 700 ntTSL 323.92■■□□□ 1.423e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC23.24■■□□□ 1.313e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.91■■□□□ 1.13e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.73■■□□□ 1.073e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-219ENST00000597636 2874 ntTSL 521.61■■□□□ 1.053e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-212ENST00000596756 931 ntTSL 521.38■■□□□ 1.013e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-229ENST00000601373 680 ntTSL 220.72■□□□□ 0.913e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.823e-6■□□□□ 11.3
DROSHAQ9NRR4 IRF3-206ENST00000593818 924 ntTSL 219.99■□□□□ 0.793e-6■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC22.89■■□□□ 1.259e-7■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.649e-7■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC16.93■□□□□ 0.39e-7■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-202ENST00000394935 580 ntTSL 314.99□□□□□ -0.019e-7■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC11.98□□□□□ -0.499e-7■□□□□ 11.3
DROSHAQ9NRR4 RPL23A-201ENST00000355731 587 ntTSL 59.34□□□□□ -0.919e-7■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-210ENST00000609574 607 ntTSL 225.09■■□□□ 1.612e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.09■■□□□ 1.612e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-201ENST00000318787 1350 ntTSL 1 (best)24.46■■□□□ 1.512e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC22.07■■□□□ 1.122e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-206ENST00000608461 587 ntTSL 221.95■■□□□ 1.12e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.12e-9■□□□□ 11.3
DROSHAQ9NRR4 HDDC2-209ENST00000609477 564 ntTSL 421.95■■□□□ 1.12e-9■□□□□ 11.3
DROSHAQ9NRR4 NAP1L4-206ENST00000469089 707 ntTSL 321.82■■□□□ 1.086e-7■□□□□ 11.3
DROSHAQ9NRR4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC20.56■□□□□ 0.881e-13■□□□□ 11.3
DROSHAQ9NRR4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.682e-6■□□□□ 11.3
DROSHAQ9NRR4 HOXC6-204ENST00000509328 358 ntTSL 330.93■■■□□ 2.542e-6■□□□□ 11.3
DROSHAQ9NRR4 HOXC9-202ENST00000504557 581 ntTSL 321.73■■□□□ 1.072e-6■□□□□ 11.3
DROSHAQ9NRR4 HOXC6-203ENST00000504315 538 ntTSL 321.12■□□□□ 0.972e-6■□□□□ 11.3
DROSHAQ9NRR4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC22.35■■□□□ 1.177e-31■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-202ENST00000460563 1045 ntTSL 517.15■□□□□ 0.344e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-204ENST00000464888 565 ntTSL 216.32■□□□□ 0.24e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-203ENST00000463817 853 ntTSL 213.34□□□□□ -0.274e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-208ENST00000479815 1030 ntTSL 513.34□□□□□ -0.274e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-206ENST00000467700 932 ntTSL 211.51□□□□□ -0.574e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.694e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-207ENST00000468388 320 ntTSL 310.72□□□□□ -0.694e-8■□□□□ 11.2
DROSHAQ9NRR4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.294e-8■□□□□ 11.2
DROSHAQ9NRR4 SRRM2-228ENST00000576878 1141 ntTSL 226.78■■□□□ 1.884e-6■□□□□ 11.2
DROSHAQ9NRR4 SRRM2-206ENST00000571041 498 ntTSL 423.66■■□□□ 1.384e-6■□□□□ 11.2
DROSHAQ9NRR4 SRRM2-204ENST00000570705 675 ntTSL 323.22■■□□□ 1.314e-6■□□□□ 11.2
DROSHAQ9NRR4 NDRG1-224ENST00000522738 530 ntTSL 518.13■□□□□ 0.494e-6■□□□□ 11.2
DROSHAQ9NRR4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.974e-6■□□□□ 11.2
DROSHAQ9NRR4 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)8.52□□□□□ -1.054e-6■□□□□ 11.2
DROSHAQ9NRR4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.114e-6■□□□□ 11.2
DROSHAQ9NRR4 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC11.1□□□□□ -0.633e-9■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-215ENST00000535492 509 ntTSL 437.33■■■■□ 3.576e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-218ENST00000538877 550 ntTSL 437.33■■■■□ 3.576e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-233ENST00000545720 552 ntTSL 537.33■■■■□ 3.576e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC34.46■■■■□ 3.116e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-213ENST00000501412 1488 ntTSL 234■■■■□ 3.036e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-217ENST00000538283 591 ntTSL 433.89■■■■□ 3.026e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.816e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-209ENST00000460800 755 ntTSL 331.59■■■□□ 2.656e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-214ENST00000534899 606 ntTSL 431.59■■■□□ 2.656e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.59■■■□□ 2.656e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.596e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-212ENST00000489473 561 ntTSL 430.72■■■□□ 2.516e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-219ENST00000538980 587 ntTSL 330.72■■■□□ 2.516e-8■□□□□ 11.2
Retrieved 100 of 16,331 protein–RNA pairs in 83.5 ms