RNA–Protein interactions for RNA: ENST00000315183.11

TNRC6A-201, Transcript of trinucleotide repeat containing 6A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC6A, Length 8,303 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-201ENST00000315183 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
TNRC6A-201ENST00000315183 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
TNRC6A-201ENST00000315183 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
TNRC6A-201ENST00000315183 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
TNRC6A-201ENST00000315183 APLP2Q06481 763 aa11.97□□□□□ -0.49
TNRC6A-201ENST00000315183 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
TNRC6A-201ENST00000315183 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
TNRC6A-201ENST00000315183 MYT1Q01538 1121 aa11.57□□□□□ -0.56
TNRC6A-201ENST00000315183 ZEB1P37275 1124 aaPredicted RBP11.56□□□□□ -0.56
TNRC6A-201ENST00000315183 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
TNRC6A-201ENST00000315183 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
TNRC6A-201ENST00000315183 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
TNRC6A-201ENST00000315183 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
TNRC6A-201ENST00000315183 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
TNRC6A-201ENST00000315183 ERICH6Q7L0X2 663 aa11.38□□□□□ -0.59
TNRC6A-201ENST00000315183 NEFLP07196 543 aa11.32□□□□□ -0.6
TNRC6A-201ENST00000315183 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
TNRC6A-201ENST00000315183 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.63
TNRC6A-201ENST00000315183 NEFMP07197 916 aa11.04□□□□□ -0.64
TNRC6A-201ENST00000315183 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
TNRC6A-201ENST00000315183 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
TNRC6A-201ENST00000315183 SHROOM4Q9ULL8 1493 aa10.96□□□□□ -0.65
TNRC6A-201ENST00000315183 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
TNRC6A-201ENST00000315183 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
TNRC6A-201ENST00000315183 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
TNRC6A-201ENST00000315183 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
TNRC6A-201ENST00000315183 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
TNRC6A-201ENST00000315183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
TNRC6A-201ENST00000315183 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
TNRC6A-201ENST00000315183 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
TNRC6A-201ENST00000315183 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
TNRC6A-201ENST00000315183 RTL5Q5HYW3 569 aaPredicted RBP10.7□□□□□ -0.7
TNRC6A-201ENST00000315183 TRIM26Q12899 539 aaPredicted RBP10.65□□□□□ -0.7
TNRC6A-201ENST00000315183 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
TNRC6A-201ENST00000315183 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
TNRC6A-201ENST00000315183 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
TNRC6A-201ENST00000315183 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
TNRC6A-201ENST00000315183 EHMT2Q96KQ7 1210 aa10.6□□□□□ -0.71
TNRC6A-201ENST00000315183 ABCC9O60706 1549 aa10.59□□□□□ -0.71
TNRC6A-201ENST00000315183 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
TNRC6A-201ENST00000315183 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
TNRC6A-201ENST00000315183 PEG3Q9GZU2 1588 aa10.54□□□□□ -0.72
TNRC6A-201ENST00000315183 NACADO15069 1562 aa10.53□□□□□ -0.72
TNRC6A-201ENST00000315183 ANP32BQ92688 251 aaKnown RBP10.53□□□□□ -0.72
TNRC6A-201ENST00000315183 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
TNRC6A-201ENST00000315183 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
TNRC6A-201ENST00000315183 SLC24A1O60721 1099 aa10.46□□□□□ -0.74
TNRC6A-201ENST00000315183 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
TNRC6A-201ENST00000315183 UPF2Q9HAU5 1272 aaKnown RBP10.42□□□□□ -0.74
TNRC6A-201ENST00000315183 BICRAQ9NZM4 1560 aa10.41□□□□□ -0.74
TNRC6A-201ENST00000315183 CDK11BP21127 795 aaKnown RBP10.4□□□□□ -0.74
TNRC6A-201ENST00000315183 ANP32CO43423 234 aa10.39□□□□□ -0.75
TNRC6A-201ENST00000315183 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
TNRC6A-201ENST00000315183 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
TNRC6A-201ENST00000315183 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
TNRC6A-201ENST00000315183 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-201ENST00000315183 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.33□□□□□ -0.76
TNRC6A-201ENST00000315183 GLIPR1L2Q4G1C9 344 aa10.32□□□□□ -0.76
TNRC6A-201ENST00000315183 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
TNRC6A-201ENST00000315183 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
TNRC6A-201ENST00000315183 ANP32AP39687 249 aaKnown RBP10.28□□□□□ -0.76
TNRC6A-201ENST00000315183 BCANQ96GW7 911 aa10.28□□□□□ -0.76
TNRC6A-201ENST00000315183 CHMP4BQ9H444 224 aaKnown RBP10.28□□□□□ -0.76
TNRC6A-201ENST00000315183 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
TNRC6A-201ENST00000315183 ITGAEP38570 1179 aa10.24□□□□□ -0.77
TNRC6A-201ENST00000315183 CHMP4AQ9BY43 222 aa10.24□□□□□ -0.77
TNRC6A-201ENST00000315183 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
TNRC6A-201ENST00000315183 HSP90AA1P07900 732 aaKnown RBP10.24□□□□□ -0.77
TNRC6A-201ENST00000315183 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
TNRC6A-201ENST00000315183 HRCP23327 699 aa10.22□□□□□ -0.77
TNRC6A-201ENST00000315183 MYH16Q9H6N6 1097 aa10.22□□□□□ -0.77
TNRC6A-201ENST00000315183 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
TNRC6A-201ENST00000315183 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
TNRC6A-201ENST00000315183 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
TNRC6A-201ENST00000315183 L1TD1Q5T7N2 865 aaKnown RBP10.18□□□□□ -0.78
TNRC6A-201ENST00000315183 EEA1Q15075 1411 aa10.17□□□□□ -0.78
TNRC6A-201ENST00000315183 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
TNRC6A-201ENST00000315183 RSF1Q96T23 1441 aaPredicted RBP10.15□□□□□ -0.78
TNRC6A-201ENST00000315183 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
TNRC6A-201ENST00000315183 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
TNRC6A-201ENST00000315183 TSPY4P0CV99 314 aa10.14□□□□□ -0.79
TNRC6A-201ENST00000315183 TSPY10P0CW01 314 aa10.14□□□□□ -0.79
TNRC6A-201ENST00000315183 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
TNRC6A-201ENST00000315183 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
TNRC6A-201ENST00000315183 PNNQ9H307 717 aaKnown RBP10.13□□□□□ -0.79
TNRC6A-201ENST00000315183 TONSLQ96HA7 1378 aa10.13□□□□□ -0.79
TNRC6A-201ENST00000315183 NRDCO43847 1150 aa10.13□□□□□ -0.79
TNRC6A-201ENST00000315183 MS4A1P11836 297 aa10.11□□□□□ -0.79
TNRC6A-201ENST00000315183 GOLGA6L22H0YM25 854 aa10.11□□□□□ -0.79
TNRC6A-201ENST00000315183 FBLN2P98095 1184 aa10.11□□□□□ -0.79
TNRC6A-201ENST00000315183 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
TNRC6A-201ENST00000315183 NCLP19338 710 aaKnown RBP10.09□□□□□ -0.79
TNRC6A-201ENST00000315183 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
TNRC6A-201ENST00000315183 CASC1Q6TDU7 716 aa10.08□□□□□ -0.8
TNRC6A-201ENST00000315183 ARID4BQ4LE39 1312 aaPredicted RBP10.07□□□□□ -0.8
TNRC6A-201ENST00000315183 BECN1Q14457 450 aa10.07□□□□□ -0.8
TNRC6A-201ENST00000315183 AEBP2Q6ZN18 517 aaPredicted RBP10.07□□□□□ -0.8
TNRC6A-201ENST00000315183 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
TNRC6A-201ENST00000315183 USP35Q9P2H5 1018 aa10.06□□□□□ -0.8
TNRC6A-201ENST00000315183 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms