RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
IRF3-212ENST00000596756 ABCC9O60706 1549 aa30.72■■■□□ 2.51
IRF3-212ENST00000596756 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
IRF3-212ENST00000596756 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
IRF3-212ENST00000596756 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
IRF3-212ENST00000596756 NACADO15069 1562 aa28.97■■■□□ 2.23
IRF3-212ENST00000596756 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
IRF3-212ENST00000596756 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.172e-7■■■■□ 22.6
IRF3-212ENST00000596756 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
IRF3-212ENST00000596756 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
IRF3-212ENST00000596756 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
IRF3-212ENST00000596756 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
IRF3-212ENST00000596756 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
IRF3-212ENST00000596756 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
IRF3-212ENST00000596756 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
IRF3-212ENST00000596756 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
IRF3-212ENST00000596756 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
IRF3-212ENST00000596756 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
IRF3-212ENST00000596756 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
IRF3-212ENST00000596756 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
IRF3-212ENST00000596756 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
IRF3-212ENST00000596756 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
IRF3-212ENST00000596756 CUX2O14529 1486 aa26.56■■□□□ 1.84
IRF3-212ENST00000596756 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
IRF3-212ENST00000596756 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
IRF3-212ENST00000596756 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
IRF3-212ENST00000596756 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
IRF3-212ENST00000596756 NESP48681 1621 aa26.38■■□□□ 1.81
IRF3-212ENST00000596756 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
IRF3-212ENST00000596756 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
IRF3-212ENST00000596756 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
IRF3-212ENST00000596756 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
IRF3-212ENST00000596756 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
IRF3-212ENST00000596756 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
IRF3-212ENST00000596756 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
IRF3-212ENST00000596756 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
IRF3-212ENST00000596756 WIZO95785 1651 aa25.93■■□□□ 1.74
IRF3-212ENST00000596756 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
IRF3-212ENST00000596756 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
IRF3-212ENST00000596756 WDR62O43379 1518 aa25.75■■□□□ 1.71
IRF3-212ENST00000596756 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
IRF3-212ENST00000596756 CFTRP13569 1480 aa25.63■■□□□ 1.69
IRF3-212ENST00000596756 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
IRF3-212ENST00000596756 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
IRF3-212ENST00000596756 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
IRF3-212ENST00000596756 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
IRF3-212ENST00000596756 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
IRF3-212ENST00000596756 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
IRF3-212ENST00000596756 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
IRF3-212ENST00000596756 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
IRF3-212ENST00000596756 ZNF608Q9ULD9 1512 aaPredicted RBP25.15■■□□□ 1.62
IRF3-212ENST00000596756 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
IRF3-212ENST00000596756 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
IRF3-212ENST00000596756 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
IRF3-212ENST00000596756 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
IRF3-212ENST00000596756 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
IRF3-212ENST00000596756 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
IRF3-212ENST00000596756 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
IRF3-212ENST00000596756 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
IRF3-212ENST00000596756 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
IRF3-212ENST00000596756 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.582e-7■■■■■ 27
IRF3-212ENST00000596756 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
IRF3-212ENST00000596756 CHD1O14646 1710 aa24.78■■□□□ 1.56
IRF3-212ENST00000596756 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
IRF3-212ENST00000596756 SOGA1O94964 1423 aa24.74■■□□□ 1.55
IRF3-212ENST00000596756 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
IRF3-212ENST00000596756 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
IRF3-212ENST00000596756 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
IRF3-212ENST00000596756 CUX1P39880 1505 aa24.69■■□□□ 1.54
IRF3-212ENST00000596756 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
IRF3-212ENST00000596756 FBLN2P98095 1184 aa24.67■■□□□ 1.54
IRF3-212ENST00000596756 WDR97A6NE52 1622 aa24.64■■□□□ 1.54
IRF3-212ENST00000596756 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
IRF3-212ENST00000596756 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
IRF3-212ENST00000596756 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
IRF3-212ENST00000596756 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
IRF3-212ENST00000596756 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
IRF3-212ENST00000596756 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
IRF3-212ENST00000596756 SYNJ2O15056 1496 aa24.47■■□□□ 1.51
IRF3-212ENST00000596756 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
IRF3-212ENST00000596756 TRHP20396 242 aaPredicted RBP24.43■■□□□ 1.5
IRF3-212ENST00000596756 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
IRF3-212ENST00000596756 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
IRF3-212ENST00000596756 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
IRF3-212ENST00000596756 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
IRF3-212ENST00000596756 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
IRF3-212ENST00000596756 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
IRF3-212ENST00000596756 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
IRF3-212ENST00000596756 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
IRF3-212ENST00000596756 NUP160Q12769 1436 aa24.19■■□□□ 1.46
IRF3-212ENST00000596756 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
IRF3-212ENST00000596756 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
IRF3-212ENST00000596756 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
IRF3-212ENST00000596756 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
IRF3-212ENST00000596756 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
IRF3-212ENST00000596756 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
IRF3-212ENST00000596756 JPH4Q96JJ6 628 aa23.93■■□□□ 1.42
IRF3-212ENST00000596756 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
IRF3-212ENST00000596756 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
IRF3-212ENST00000596756 IGF1RP08069 1367 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms