RNA–Protein interactions for RNA: ENST00000450214.6

RAP1B-207, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-207ENST00000450214 NISCHQ9Y2I1 1504 aa53.09■■■■■ 6.09
RAP1B-207ENST00000450214 CCDC180Q9P1Z9 1646 aa46.77■■■■■ 5.08
RAP1B-207ENST00000450214 ABCC9O60706 1549 aa44.89■■■■■ 4.78
RAP1B-207ENST00000450214 ZCCHC6Q5VYS8 1495 aaKnown RBP44.4■■■■■ 4.7
RAP1B-207ENST00000450214 DCAF1Q9Y4B6 1507 aa44.01■■■■■ 4.64
RAP1B-207ENST00000450214 DCAF8L2P0C7V8 631 aa43.95■■■■■ 4.63
RAP1B-207ENST00000450214 MYO15BQ96JP2 1530 aa43.89■■■■■ 4.62
RAP1B-207ENST00000450214 NACADO15069 1562 aa43.8■■■■■ 4.6
RAP1B-207ENST00000450214 RB1CC1Q8TDY2 1594 aa43.6■■■■■ 4.57
RAP1B-207ENST00000450214 SCRIBQ14160 1630 aa42.69■■■■■ 4.43
RAP1B-207ENST00000450214 UNC13AQ9UPW8 1703 aa42.57■■■■■ 4.41
RAP1B-207ENST00000450214 SHROOM4Q9ULL8 1493 aa42.38■■■■■ 4.38
RAP1B-207ENST00000450214 BICRAQ9NZM4 1560 aa42.26■■■■■ 4.36
RAP1B-207ENST00000450214 PABPN1Q86U42 306 aaKnown RBP eCLIP42.11■■■■■ 4.33
RAP1B-207ENST00000450214 CECR2Q9BXF3 1484 aa41.23■■■■■ 4.19
RAP1B-207ENST00000450214 BAZ1AQ9NRL2 1556 aaPredicted RBP41.08■■■■■ 4.17
RAP1B-207ENST00000450214 EIF4G1Q04637 1599 aaKnown RBP41.06■■■■■ 4.16
RAP1B-207ENST00000450214 SMARCA4P51532 1647 aa40.96■■■■■ 4.15
RAP1B-207ENST00000450214 MROH2BQ7Z745 1585 aa40.91■■■■■ 4.14
RAP1B-207ENST00000450214 RSF1Q96T23 1441 aaPredicted RBP40.8■■■■■ 4.12
RAP1B-207ENST00000450214 CC2D2AQ9P2K1 1620 aa40.66■■■■■ 4.1
RAP1B-207ENST00000450214 PEG3Q9GZU2 1588 aa40.61■■■■■ 4.09
RAP1B-207ENST00000450214 ATAD2BQ9ULI0 1458 aa40.56■■■■■ 4.08
RAP1B-207ENST00000450214 SMARCA2P51531 1590 aa40.54■■■■■ 4.08
RAP1B-207ENST00000450214 WIZO95785 1651 aa40.48■■■■■ 4.07
RAP1B-207ENST00000450214 DNAJC5BQ9UF47 199 aa40.45■■■■■ 4.07
RAP1B-207ENST00000450214 NCAPD3P42695 1498 aa40.44■■■■■ 4.06
RAP1B-207ENST00000450214 SUPT5HO00267 1087 aaKnown RBP40.38■■■■■ 4.05
RAP1B-207ENST00000450214 HMGXB3Q12766 1538 aa40.28■■■■■ 4.04
RAP1B-207ENST00000450214 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
RAP1B-207ENST00000450214 TOP2AP11388 1531 aaKnown RBP40.12■■■■■ 4.01
RAP1B-207ENST00000450214 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
RAP1B-207ENST00000450214 CADPSQ9ULU8 1353 aa39.3■■■■□ 3.88
RAP1B-207ENST00000450214 CFTRP13569 1480 aa39.25■■■■□ 3.87
RAP1B-207ENST00000450214 LAMC3Q9Y6N6 1575 aa39.19■■■■□ 3.86
RAP1B-207ENST00000450214 NESP48681 1621 aa39.11■■■■□ 3.85
RAP1B-207ENST00000450214 PRDM2Q13029 1718 aa38.94■■■■□ 3.82
RAP1B-207ENST00000450214 PDS5BQ9NTI5 1447 aa38.92■■■■□ 3.82
RAP1B-207ENST00000450214 FANCD2Q9BXW9 1451 aa38.8■■■■□ 3.8
RAP1B-207ENST00000450214 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
RAP1B-207ENST00000450214 KIF21AQ7Z4S6 1674 aa38.64■■■■□ 3.78
RAP1B-207ENST00000450214 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
RAP1B-207ENST00000450214 ABCC8Q09428 1581 aa38.44■■■■□ 3.74
RAP1B-207ENST00000450214 MRC2Q9UBG0 1479 aa38.43■■■■□ 3.74
RAP1B-207ENST00000450214 WRNQ14191 1432 aaPredicted RBP eCLIP38.42■■■■□ 3.74
RAP1B-207ENST00000450214 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
RAP1B-207ENST00000450214 THOC2Q8NI27 1593 aaKnown RBP38.33■■■■□ 3.73
RAP1B-207ENST00000450214 CUX1P39880 1505 aa38.32■■■■□ 3.72
RAP1B-207ENST00000450214 DNMBPQ6XZF7 1577 aa38.3■■■■□ 3.72
RAP1B-207ENST00000450214 TOPBP1Q92547 1522 aa38.28■■■■□ 3.72
RAP1B-207ENST00000450214 WDR62O43379 1518 aa38.27■■■■□ 3.72
RAP1B-207ENST00000450214 CHIC1Q5VXU3 224 aa38.26■■■■□ 3.72
RAP1B-207ENST00000450214 SYNJ1O43426 1573 aa38.23■■■■□ 3.71
RAP1B-207ENST00000450214 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
RAP1B-207ENST00000450214 BIVM-ERCC5R4GMW8 1640 aa38.2■■■■□ 3.71
RAP1B-207ENST00000450214 TRIM41Q8WV44 630 aa38.14■■■■□ 3.7
RAP1B-207ENST00000450214 FGD5Q6ZNL6 1462 aa38.04■■■■□ 3.68
RAP1B-207ENST00000450214 POLA1P09884 1462 aaPredicted RBP38.02■■■■□ 3.68
RAP1B-207ENST00000450214 CUX2O14529 1486 aa37.94■■■■□ 3.66
RAP1B-207ENST00000450214 SOGA1O94964 1423 aa37.9■■■■□ 3.66
RAP1B-207ENST00000450214 IFT140Q96RY7 1462 aa37.84■■■■□ 3.65
RAP1B-207ENST00000450214 RAD54L2Q9Y4B4 1467 aa37.82■■■■□ 3.65
RAP1B-207ENST00000450214 TARBP1Q13395 1621 aaKnown RBP37.8■■■■□ 3.64
RAP1B-207ENST00000450214 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
RAP1B-207ENST00000450214 WDR97A6NE52 1622 aa37.66■■■■□ 3.62
RAP1B-207ENST00000450214 KIF27Q86VH2 1401 aa37.56■■■■□ 3.6
RAP1B-207ENST00000450214 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
RAP1B-207ENST00000450214 TDRD9Q8NDG6 1382 aaKnown RBP37.55■■■■□ 3.6
RAP1B-207ENST00000450214 ABCA5Q8WWZ7 1642 aa37.49■■■■□ 3.59
RAP1B-207ENST00000450214 AQRO60306 1485 aaKnown RBP eCLIP37.47■■■■□ 3.591e-6■■■■□ 26.1
RAP1B-207ENST00000450214 GAPVD1Q14C86 1478 aa37.46■■■■□ 3.59
RAP1B-207ENST00000450214 EEA1Q15075 1411 aa37.46■■■■□ 3.59
RAP1B-207ENST00000450214 RUSC2Q8N2Y8 1516 aa37.46■■■■□ 3.59
RAP1B-207ENST00000450214 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
RAP1B-207ENST00000450214 GRIN2BQ13224 1484 aa37.35■■■■□ 3.57
RAP1B-207ENST00000450214 IGF1RP08069 1367 aa37.33■■■■□ 3.57
RAP1B-207ENST00000450214 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.56
RAP1B-207ENST00000450214 CSRNP3Q8WYN3 585 aa37.28■■■■□ 3.56
RAP1B-207ENST00000450214 PBRM1Q86U86 1689 aa37.26■■■■□ 3.56
RAP1B-207ENST00000450214 FAM9AQ8IZU1 332 aaPredicted RBP37.26■■■■□ 3.55
RAP1B-207ENST00000450214 MAGI1Q96QZ7 1491 aaPredicted RBP37.16■■■■□ 3.54
RAP1B-207ENST00000450214 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.53
RAP1B-207ENST00000450214 CUL7Q14999 1698 aa37.12■■■■□ 3.53
RAP1B-207ENST00000450214 CARMIL1Q5VZK9 1371 aa37.1■■■■□ 3.53
RAP1B-207ENST00000450214 PRXQ9BXM0 1461 aa37.08■■■■□ 3.53
RAP1B-207ENST00000450214 FHAD1B1AJZ9 1412 aa37.08■■■■□ 3.53
RAP1B-207ENST00000450214 ADAMTS12P58397 1594 aa37.05■■■■□ 3.52
RAP1B-207ENST00000450214 SYNJ2O15056 1496 aa36.99■■■■□ 3.51
RAP1B-207ENST00000450214 RAPGEF2Q9Y4G8 1499 aa36.97■■■■□ 3.51
RAP1B-207ENST00000450214 KIF21BO75037 1637 aa36.95■■■■□ 3.51
RAP1B-207ENST00000450214 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
RAP1B-207ENST00000450214 GRIN2AQ12879 1464 aa36.85■■■■□ 3.49
RAP1B-207ENST00000450214 FBLN2P98095 1184 aa36.83■■■■□ 3.49
RAP1B-207ENST00000450214 GOLGA3Q08378 1498 aa36.81■■■■□ 3.48
RAP1B-207ENST00000450214 CHD1O14646 1710 aa36.76■■■■□ 3.48
RAP1B-207ENST00000450214 NUP160Q12769 1436 aa36.68■■■■□ 3.46
RAP1B-207ENST00000450214 LOC105371045A0A1W2PR82 267 aa36.67■■■■□ 3.46
RAP1B-207ENST00000450214 EHMT2Q96KQ7 1210 aa36.64■■■■□ 3.46
RAP1B-207ENST00000450214 UBTFP17480 764 aaKnown RBP36.63■■■■□ 3.45
RAP1B-207ENST00000450214 CEP170Q5SW79 1584 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms