RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 NISCHQ9Y2I1 1504 aa31.18■■■□□ 2.58
TYMS-204ENST00000579128 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
TYMS-204ENST00000579128 ABCC9O60706 1549 aa27.58■■■□□ 2.01
TYMS-204ENST00000579128 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
TYMS-204ENST00000579128 NACADO15069 1562 aa26.36■■□□□ 1.81
TYMS-204ENST00000579128 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
TYMS-204ENST00000579128 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
TYMS-204ENST00000579128 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
TYMS-204ENST00000579128 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
TYMS-204ENST00000579128 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
TYMS-204ENST00000579128 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
TYMS-204ENST00000579128 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
TYMS-204ENST00000579128 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
TYMS-204ENST00000579128 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
TYMS-204ENST00000579128 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
TYMS-204ENST00000579128 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
TYMS-204ENST00000579128 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
TYMS-204ENST00000579128 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
TYMS-204ENST00000579128 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
TYMS-204ENST00000579128 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
TYMS-204ENST00000579128 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
TYMS-204ENST00000579128 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
TYMS-204ENST00000579128 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
TYMS-204ENST00000579128 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
TYMS-204ENST00000579128 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
TYMS-204ENST00000579128 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
TYMS-204ENST00000579128 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
TYMS-204ENST00000579128 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
TYMS-204ENST00000579128 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
TYMS-204ENST00000579128 CUX2O14529 1486 aa23.78■■□□□ 1.4
TYMS-204ENST00000579128 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
TYMS-204ENST00000579128 NESP48681 1621 aa23.71■■□□□ 1.39
TYMS-204ENST00000579128 WIZO95785 1651 aa23.67■■□□□ 1.38
TYMS-204ENST00000579128 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
TYMS-204ENST00000579128 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
TYMS-204ENST00000579128 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
TYMS-204ENST00000579128 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
TYMS-204ENST00000579128 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
TYMS-204ENST00000579128 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
TYMS-204ENST00000579128 CFTRP13569 1480 aa23.36■■□□□ 1.33
TYMS-204ENST00000579128 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
TYMS-204ENST00000579128 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
TYMS-204ENST00000579128 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
TYMS-204ENST00000579128 WDR62O43379 1518 aa23.24■■□□□ 1.31
TYMS-204ENST00000579128 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
TYMS-204ENST00000579128 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
TYMS-204ENST00000579128 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
TYMS-204ENST00000579128 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
TYMS-204ENST00000579128 IFT140Q96RY7 1462 aa22.86■■□□□ 1.25
TYMS-204ENST00000579128 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
TYMS-204ENST00000579128 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
TYMS-204ENST00000579128 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
TYMS-204ENST00000579128 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
TYMS-204ENST00000579128 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
TYMS-204ENST00000579128 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
TYMS-204ENST00000579128 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
TYMS-204ENST00000579128 SOGA1O94964 1423 aa22.6■■□□□ 1.21
TYMS-204ENST00000579128 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
TYMS-204ENST00000579128 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
TYMS-204ENST00000579128 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.28e-7■■■■■ 28.7
TYMS-204ENST00000579128 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
TYMS-204ENST00000579128 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
TYMS-204ENST00000579128 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
TYMS-204ENST00000579128 CUX1P39880 1505 aa22.5■■□□□ 1.19
TYMS-204ENST00000579128 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
TYMS-204ENST00000579128 FBLN2P98095 1184 aa22.45■■□□□ 1.18
TYMS-204ENST00000579128 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
TYMS-204ENST00000579128 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
TYMS-204ENST00000579128 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
TYMS-204ENST00000579128 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
TYMS-204ENST00000579128 CHD1O14646 1710 aa22.34■■□□□ 1.17
TYMS-204ENST00000579128 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
TYMS-204ENST00000579128 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
TYMS-204ENST00000579128 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
TYMS-204ENST00000579128 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
TYMS-204ENST00000579128 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
TYMS-204ENST00000579128 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
TYMS-204ENST00000579128 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
TYMS-204ENST00000579128 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
TYMS-204ENST00000579128 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
TYMS-204ENST00000579128 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
TYMS-204ENST00000579128 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
TYMS-204ENST00000579128 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
TYMS-204ENST00000579128 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
TYMS-204ENST00000579128 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
TYMS-204ENST00000579128 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
TYMS-204ENST00000579128 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
TYMS-204ENST00000579128 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
TYMS-204ENST00000579128 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
TYMS-204ENST00000579128 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
TYMS-204ENST00000579128 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
TYMS-204ENST00000579128 NUP160Q12769 1436 aa21.97■■□□□ 1.11
TYMS-204ENST00000579128 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
TYMS-204ENST00000579128 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
TYMS-204ENST00000579128 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
TYMS-204ENST00000579128 IGF1RP08069 1367 aa21.84■■□□□ 1.09
TYMS-204ENST00000579128 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
TYMS-204ENST00000579128 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
TYMS-204ENST00000579128 CUL7Q14999 1698 aa21.79■■□□□ 1.08
TYMS-204ENST00000579128 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms