RNA–Protein interactions for RNA: ENST00000394938.8

RPL23A-203, Transcript of ribosomal protein L23a, humanhuman

TSL 2 BASIC

Gene RPL23A, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-203ENST00000394938 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
RPL23A-203ENST00000394938 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
RPL23A-203ENST00000394938 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
RPL23A-203ENST00000394938 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
RPL23A-203ENST00000394938 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
RPL23A-203ENST00000394938 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
RPL23A-203ENST00000394938 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
RPL23A-203ENST00000394938 FOXD1Q16676 465 aa16.94■□□□□ 0.3
RPL23A-203ENST00000394938 ABCC9O60706 1549 aa16.73■□□□□ 0.27
RPL23A-203ENST00000394938 MSH5O43196 834 aa16.22■□□□□ 0.19
RPL23A-203ENST00000394938 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
RPL23A-203ENST00000394938 NACADO15069 1562 aa16.09■□□□□ 0.17
RPL23A-203ENST00000394938 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
RPL23A-203ENST00000394938 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
RPL23A-203ENST00000394938 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
RPL23A-203ENST00000394938 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
RPL23A-203ENST00000394938 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
RPL23A-203ENST00000394938 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
RPL23A-203ENST00000394938 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
RPL23A-203ENST00000394938 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
RPL23A-203ENST00000394938 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.07
RPL23A-203ENST00000394938 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
RPL23A-203ENST00000394938 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
RPL23A-203ENST00000394938 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
RPL23A-203ENST00000394938 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
RPL23A-203ENST00000394938 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
RPL23A-203ENST00000394938 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
RPL23A-203ENST00000394938 ADRA2BP18089 450 aa15.02■□□□□ -0
RPL23A-203ENST00000394938 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
RPL23A-203ENST00000394938 SMARCA4P51532 1647 aa14.83□□□□□ -0.04
RPL23A-203ENST00000394938 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
RPL23A-203ENST00000394938 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
RPL23A-203ENST00000394938 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
RPL23A-203ENST00000394938 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
RPL23A-203ENST00000394938 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
RPL23A-203ENST00000394938 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
RPL23A-203ENST00000394938 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
RPL23A-203ENST00000394938 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
RPL23A-203ENST00000394938 WIZO95785 1651 aa14.5□□□□□ -0.09
RPL23A-203ENST00000394938 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
RPL23A-203ENST00000394938 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
RPL23A-203ENST00000394938 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
RPL23A-203ENST00000394938 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
RPL23A-203ENST00000394938 NESP48681 1621 aa14.44□□□□□ -0.1
RPL23A-203ENST00000394938 CUX2O14529 1486 aa14.42□□□□□ -0.1
RPL23A-203ENST00000394938 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
RPL23A-203ENST00000394938 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
RPL23A-203ENST00000394938 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
RPL23A-203ENST00000394938 CFTRP13569 1480 aa14.28□□□□□ -0.12
RPL23A-203ENST00000394938 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
RPL23A-203ENST00000394938 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
RPL23A-203ENST00000394938 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
RPL23A-203ENST00000394938 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
RPL23A-203ENST00000394938 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
RPL23A-203ENST00000394938 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
RPL23A-203ENST00000394938 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
RPL23A-203ENST00000394938 WDR62O43379 1518 aa14.16□□□□□ -0.14
RPL23A-203ENST00000394938 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
RPL23A-203ENST00000394938 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
RPL23A-203ENST00000394938 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
RPL23A-203ENST00000394938 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
RPL23A-203ENST00000394938 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
RPL23A-203ENST00000394938 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
RPL23A-203ENST00000394938 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
RPL23A-203ENST00000394938 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
RPL23A-203ENST00000394938 IFT140Q96RY7 1462 aa13.92□□□□□ -0.18
RPL23A-203ENST00000394938 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
RPL23A-203ENST00000394938 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
RPL23A-203ENST00000394938 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
RPL23A-203ENST00000394938 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
RPL23A-203ENST00000394938 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
RPL23A-203ENST00000394938 SOGA1O94964 1423 aa13.79□□□□□ -0.2
RPL23A-203ENST00000394938 CUX1P39880 1505 aa13.79□□□□□ -0.2
RPL23A-203ENST00000394938 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
RPL23A-203ENST00000394938 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
RPL23A-203ENST00000394938 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
RPL23A-203ENST00000394938 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
RPL23A-203ENST00000394938 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.216e-9■■■■□ 24.4
RPL23A-203ENST00000394938 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
RPL23A-203ENST00000394938 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
RPL23A-203ENST00000394938 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
RPL23A-203ENST00000394938 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
RPL23A-203ENST00000394938 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
RPL23A-203ENST00000394938 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
RPL23A-203ENST00000394938 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
RPL23A-203ENST00000394938 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
RPL23A-203ENST00000394938 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
RPL23A-203ENST00000394938 CHD1O14646 1710 aa13.61□□□□□ -0.23
RPL23A-203ENST00000394938 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
RPL23A-203ENST00000394938 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
RPL23A-203ENST00000394938 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
RPL23A-203ENST00000394938 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
RPL23A-203ENST00000394938 FBLN2P98095 1184 aa13.58□□□□□ -0.24
RPL23A-203ENST00000394938 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
RPL23A-203ENST00000394938 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
RPL23A-203ENST00000394938 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
RPL23A-203ENST00000394938 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
RPL23A-203ENST00000394938 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
RPL23A-203ENST00000394938 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
RPL23A-203ENST00000394938 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms