RNA–Protein interactions for RNA: ENST00000538283.5

RAP1B-217, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-217ENST00000538283 NISCHQ9Y2I1 1504 aa53.59■■■■■ 6.17
RAP1B-217ENST00000538283 CCDC180Q9P1Z9 1646 aa47.73■■■■■ 5.23
RAP1B-217ENST00000538283 ABCC9O60706 1549 aa46.44■■■■■ 5.02
RAP1B-217ENST00000538283 RB1CC1Q8TDY2 1594 aa44.79■■■■■ 4.76
RAP1B-217ENST00000538283 NACADO15069 1562 aa44.75■■■■■ 4.75
RAP1B-217ENST00000538283 ZCCHC6Q5VYS8 1495 aaKnown RBP44.69■■■■■ 4.74
RAP1B-217ENST00000538283 DCAF8L2P0C7V8 631 aa44.6■■■■■ 4.73
RAP1B-217ENST00000538283 MYO15BQ96JP2 1530 aa44.5■■■■■ 4.71
RAP1B-217ENST00000538283 DCAF1Q9Y4B6 1507 aa44.36■■■■■ 4.69
RAP1B-217ENST00000538283 UNC13AQ9UPW8 1703 aa43.93■■■■■ 4.62
RAP1B-217ENST00000538283 SCRIBQ14160 1630 aa43.51■■■■■ 4.56
RAP1B-217ENST00000538283 BICRAQ9NZM4 1560 aa43.42■■■■■ 4.54
RAP1B-217ENST00000538283 PABPN1Q86U42 306 aaKnown RBP eCLIP43.32■■■■■ 4.53
RAP1B-217ENST00000538283 SHROOM4Q9ULL8 1493 aa42.97■■■■■ 4.47
RAP1B-217ENST00000538283 DNAJC5BQ9UF47 199 aa42.4■■■■■ 4.38
RAP1B-217ENST00000538283 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
RAP1B-217ENST00000538283 CC2D2AQ9P2K1 1620 aa42.08■■■■■ 4.33
RAP1B-217ENST00000538283 CECR2Q9BXF3 1484 aa41.71■■■■■ 4.27
RAP1B-217ENST00000538283 SMARCA4P51532 1647 aa41.62■■■■■ 4.25
RAP1B-217ENST00000538283 BAZ1AQ9NRL2 1556 aaPredicted RBP41.57■■■■■ 4.25
RAP1B-217ENST00000538283 MROH2BQ7Z745 1585 aa41.3■■■■■ 4.2
RAP1B-217ENST00000538283 SMARCA2P51531 1590 aa41.29■■■■■ 4.2
RAP1B-217ENST00000538283 ATAD2BQ9ULI0 1458 aa41.28■■■■■ 4.2
RAP1B-217ENST00000538283 NCAPD3P42695 1498 aa41.21■■■■■ 4.19
RAP1B-217ENST00000538283 PEG3Q9GZU2 1588 aa41.2■■■■■ 4.19
RAP1B-217ENST00000538283 HMGXB3Q12766 1538 aa41.11■■■■■ 4.17
RAP1B-217ENST00000538283 BAZ1BQ9UIG0 1483 aaKnown RBP40.98■■■■■ 4.15
RAP1B-217ENST00000538283 WIZO95785 1651 aa40.94■■■■■ 4.14
RAP1B-217ENST00000538283 RSF1Q96T23 1441 aaPredicted RBP40.83■■■■■ 4.13
RAP1B-217ENST00000538283 TOP2AP11388 1531 aaKnown RBP40.48■■■■■ 4.07
RAP1B-217ENST00000538283 NESP48681 1621 aa40.23■■■■■ 4.03
RAP1B-217ENST00000538283 LAMC3Q9Y6N6 1575 aa40.21■■■■■ 4.03
RAP1B-217ENST00000538283 ERCC6Q03468 1493 aa40.03■■■■■ 4
RAP1B-217ENST00000538283 CADPSQ9ULU8 1353 aa40■■■■□ 3.99
RAP1B-217ENST00000538283 CCDC88BA6NC98 1476 aa39.94■■■■□ 3.98
RAP1B-217ENST00000538283 KIF21AQ7Z4S6 1674 aa39.9■■■■□ 3.98
RAP1B-217ENST00000538283 PDS5BQ9NTI5 1447 aa39.84■■■■□ 3.97
RAP1B-217ENST00000538283 SUPT5HO00267 1087 aaKnown RBP39.84■■■■□ 3.97
RAP1B-217ENST00000538283 CFTRP13569 1480 aa39.82■■■■□ 3.97
RAP1B-217ENST00000538283 PRDM2Q13029 1718 aa39.79■■■■□ 3.96
RAP1B-217ENST00000538283 THOC2Q8NI27 1593 aaKnown RBP39.69■■■■□ 3.94
RAP1B-217ENST00000538283 FANCD2Q9BXW9 1451 aa39.6■■■■□ 3.93
RAP1B-217ENST00000538283 CUX2O14529 1486 aa39.56■■■■□ 3.92
RAP1B-217ENST00000538283 CEP164Q9UPV0 1460 aa39.56■■■■□ 3.92
RAP1B-217ENST00000538283 MRC2Q9UBG0 1479 aa39.47■■■■□ 3.91
RAP1B-217ENST00000538283 WDR62O43379 1518 aa39.37■■■■□ 3.89
RAP1B-217ENST00000538283 URB2Q14146 1524 aaKnown RBP39.21■■■■□ 3.87
RAP1B-217ENST00000538283 DNMBPQ6XZF7 1577 aa39■■■■□ 3.83
RAP1B-217ENST00000538283 TOPBP1Q92547 1522 aa39■■■■□ 3.83
RAP1B-217ENST00000538283 ABCC8Q09428 1581 aa38.99■■■■□ 3.83
RAP1B-217ENST00000538283 CUX1P39880 1505 aa38.76■■■■□ 3.8
RAP1B-217ENST00000538283 IFT140Q96RY7 1462 aa38.71■■■■□ 3.79
RAP1B-217ENST00000538283 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
RAP1B-217ENST00000538283 TARBP1Q13395 1621 aaKnown RBP38.61■■■■□ 3.77
RAP1B-217ENST00000538283 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
RAP1B-217ENST00000538283 BIVM-ERCC5R4GMW8 1640 aa38.54■■■■□ 3.76
RAP1B-217ENST00000538283 WRNQ14191 1432 aaPredicted RBP eCLIP38.52■■■■□ 3.76
RAP1B-217ENST00000538283 ZNF608Q9ULD9 1512 aaPredicted RBP38.51■■■■□ 3.76
RAP1B-217ENST00000538283 TOP2BQ02880 1626 aa38.49■■■■□ 3.75
RAP1B-217ENST00000538283 SYNJ1O43426 1573 aa38.49■■■■□ 3.75
RAP1B-217ENST00000538283 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
RAP1B-217ENST00000538283 EIF4G3O43432 1585 aaKnown RBP38.47■■■■□ 3.75
RAP1B-217ENST00000538283 SOGA1O94964 1423 aa38.46■■■■□ 3.75
RAP1B-217ENST00000538283 WDR97A6NE52 1622 aa38.41■■■■□ 3.74
RAP1B-217ENST00000538283 AQRO60306 1485 aaKnown RBP eCLIP38.28■■■■□ 3.721e-6■■■■□ 26.1
RAP1B-217ENST00000538283 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
RAP1B-217ENST00000538283 TDRD9Q8NDG6 1382 aaKnown RBP38.21■■■■□ 3.71
RAP1B-217ENST00000538283 PBRM1Q86U86 1689 aa38.14■■■■□ 3.7
RAP1B-217ENST00000538283 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
RAP1B-217ENST00000538283 DNAJC5Q9H3Z4 198 aa38.09■■■■□ 3.69
RAP1B-217ENST00000538283 GAPVD1Q14C86 1478 aa38.06■■■■□ 3.68
RAP1B-217ENST00000538283 GRIN2BQ13224 1484 aa38.03■■■■□ 3.68
RAP1B-217ENST00000538283 CHD1O14646 1710 aa38.02■■■■□ 3.68
RAP1B-217ENST00000538283 SNAPC4Q5SXM2 1469 aa37.99■■■■□ 3.67
RAP1B-217ENST00000538283 MAGI1Q96QZ7 1491 aaPredicted RBP37.95■■■■□ 3.67
RAP1B-217ENST00000538283 OSCARQ8IYS5 282 aa37.85■■■■□ 3.65
RAP1B-217ENST00000538283 ERICH3Q5RHP9 1530 aa37.8■■■■□ 3.64
RAP1B-217ENST00000538283 SYNJ2O15056 1496 aa37.78■■■■□ 3.64
RAP1B-217ENST00000538283 ADAMTS12P58397 1594 aa37.76■■■■□ 3.64
RAP1B-217ENST00000538283 FBLN2P98095 1184 aa37.76■■■■□ 3.64
RAP1B-217ENST00000538283 KIF27Q86VH2 1401 aa37.7■■■■□ 3.62
RAP1B-217ENST00000538283 CHMP7Q8WUX9 453 aaPredicted RBP37.68■■■■□ 3.62
RAP1B-217ENST00000538283 TRIM41Q8WV44 630 aa37.62■■■■□ 3.61
RAP1B-217ENST00000538283 FHAD1B1AJZ9 1412 aa37.61■■■■□ 3.61
RAP1B-217ENST00000538283 GRIN2AQ12879 1464 aa37.57■■■■□ 3.6
RAP1B-217ENST00000538283 CUL7Q14999 1698 aa37.55■■■■□ 3.6
RAP1B-217ENST00000538283 CLASP1Q7Z460 1538 aa37.51■■■■□ 3.6
RAP1B-217ENST00000538283 IGF1RP08069 1367 aa37.47■■■■□ 3.59
RAP1B-217ENST00000538283 CEP170Q5SW79 1584 aa37.42■■■■□ 3.58
RAP1B-217ENST00000538283 RUSC2Q8N2Y8 1516 aa37.4■■■■□ 3.58
RAP1B-217ENST00000538283 RIMBP3CA6NJZ7 1639 aa37.39■■■■□ 3.58
RAP1B-217ENST00000538283 RIMBP3BA6NNM3 1639 aa37.39■■■■□ 3.58
RAP1B-217ENST00000538283 RIMBP3Q9UFD9 1639 aa37.39■■■■□ 3.58
RAP1B-217ENST00000538283 NUP160Q12769 1436 aa37.36■■■■□ 3.57
RAP1B-217ENST00000538283 ARHGEF11O15085 1522 aa37.35■■■■□ 3.57
RAP1B-217ENST00000538283 CARMIL1Q5VZK9 1371 aa37.28■■■■□ 3.56
RAP1B-217ENST00000538283 CHIC1Q5VXU3 224 aa37.23■■■■□ 3.55
RAP1B-217ENST00000538283 SHROOM2Q13796 1616 aa37.17■■■■□ 3.54
RAP1B-217ENST00000538283 RAPGEF2Q9Y4G8 1499 aa37.12■■■■□ 3.53
RAP1B-217ENST00000538283 EEA1Q15075 1411 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms