RNA–Protein interactions for RNA: ENST00000496182.5

RPL23A-206, Transcript of ribosomal protein L23a, humanhuman

TSL 3 BASIC

Gene RPL23A, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-206ENST00000496182 NISCHQ9Y2I1 1504 aa35.95■■■■□ 3.35
RPL23A-206ENST00000496182 CCDC180Q9P1Z9 1646 aa31.95■■■□□ 2.71
RPL23A-206ENST00000496182 ABCC9O60706 1549 aa31.03■■■□□ 2.56
RPL23A-206ENST00000496182 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
RPL23A-206ENST00000496182 NACADO15069 1562 aa29.99■■■□□ 2.39
RPL23A-206ENST00000496182 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
RPL23A-206ENST00000496182 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
RPL23A-206ENST00000496182 MYO15BQ96JP2 1530 aa29.89■■■□□ 2.38
RPL23A-206ENST00000496182 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
RPL23A-206ENST00000496182 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
RPL23A-206ENST00000496182 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
RPL23A-206ENST00000496182 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
RPL23A-206ENST00000496182 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
RPL23A-206ENST00000496182 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
RPL23A-206ENST00000496182 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
RPL23A-206ENST00000496182 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
RPL23A-206ENST00000496182 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
RPL23A-206ENST00000496182 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
RPL23A-206ENST00000496182 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
RPL23A-206ENST00000496182 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
RPL23A-206ENST00000496182 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
RPL23A-206ENST00000496182 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
RPL23A-206ENST00000496182 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
RPL23A-206ENST00000496182 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
RPL23A-206ENST00000496182 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
RPL23A-206ENST00000496182 HMGXB3Q12766 1538 aa27.56■■■□□ 2
RPL23A-206ENST00000496182 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
RPL23A-206ENST00000496182 RSF1Q96T23 1441 aaPredicted RBP27.42■■□□□ 1.98
RPL23A-206ENST00000496182 WIZO95785 1651 aa27.38■■□□□ 1.97
RPL23A-206ENST00000496182 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
RPL23A-206ENST00000496182 LAMC3Q9Y6N6 1575 aa26.92■■□□□ 1.9
RPL23A-206ENST00000496182 NESP48681 1621 aa26.87■■□□□ 1.89
RPL23A-206ENST00000496182 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
RPL23A-206ENST00000496182 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
RPL23A-206ENST00000496182 ERCC6Q03468 1493 aa26.8■■□□□ 1.88
RPL23A-206ENST00000496182 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
RPL23A-206ENST00000496182 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
RPL23A-206ENST00000496182 CFTRP13569 1480 aa26.72■■□□□ 1.87
RPL23A-206ENST00000496182 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
RPL23A-206ENST00000496182 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
RPL23A-206ENST00000496182 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
RPL23A-206ENST00000496182 CEP164Q9UPV0 1460 aa26.52■■□□□ 1.84
RPL23A-206ENST00000496182 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
RPL23A-206ENST00000496182 CUX2O14529 1486 aa26.47■■□□□ 1.83
RPL23A-206ENST00000496182 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
RPL23A-206ENST00000496182 WDR62O43379 1518 aa26.34■■□□□ 1.81
RPL23A-206ENST00000496182 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
RPL23A-206ENST00000496182 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
RPL23A-206ENST00000496182 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
RPL23A-206ENST00000496182 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
RPL23A-206ENST00000496182 CUX1P39880 1505 aa25.97■■□□□ 1.75
RPL23A-206ENST00000496182 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
RPL23A-206ENST00000496182 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
RPL23A-206ENST00000496182 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
RPL23A-206ENST00000496182 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
RPL23A-206ENST00000496182 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
RPL23A-206ENST00000496182 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
RPL23A-206ENST00000496182 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
RPL23A-206ENST00000496182 SOGA1O94964 1423 aa25.8■■□□□ 1.72
RPL23A-206ENST00000496182 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
RPL23A-206ENST00000496182 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
RPL23A-206ENST00000496182 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
RPL23A-206ENST00000496182 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
RPL23A-206ENST00000496182 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
RPL23A-206ENST00000496182 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
RPL23A-206ENST00000496182 AQRO60306 1485 aaKnown RBP eCLIP25.63■■□□□ 1.696e-9■■■■□ 25.2
RPL23A-206ENST00000496182 TDRD9Q8NDG6 1382 aaKnown RBP25.61■■□□□ 1.69
RPL23A-206ENST00000496182 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
RPL23A-206ENST00000496182 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
RPL23A-206ENST00000496182 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
RPL23A-206ENST00000496182 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
RPL23A-206ENST00000496182 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
RPL23A-206ENST00000496182 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
RPL23A-206ENST00000496182 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
RPL23A-206ENST00000496182 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
RPL23A-206ENST00000496182 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
RPL23A-206ENST00000496182 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
RPL23A-206ENST00000496182 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
RPL23A-206ENST00000496182 CHD1O14646 1710 aa25.34■■□□□ 1.65
RPL23A-206ENST00000496182 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
RPL23A-206ENST00000496182 FBLN2P98095 1184 aa25.31■■□□□ 1.64
RPL23A-206ENST00000496182 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
RPL23A-206ENST00000496182 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
RPL23A-206ENST00000496182 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
RPL23A-206ENST00000496182 CUL7Q14999 1698 aa25.18■■□□□ 1.62
RPL23A-206ENST00000496182 GRIN2AQ12879 1464 aa25.18■■□□□ 1.62
RPL23A-206ENST00000496182 IGF1RP08069 1367 aa25.18■■□□□ 1.62
RPL23A-206ENST00000496182 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
RPL23A-206ENST00000496182 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
RPL23A-206ENST00000496182 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
RPL23A-206ENST00000496182 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
RPL23A-206ENST00000496182 NUP160Q12769 1436 aa25.05■■□□□ 1.6
RPL23A-206ENST00000496182 EEA1Q15075 1411 aa25.02■■□□□ 1.6
RPL23A-206ENST00000496182 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
RPL23A-206ENST00000496182 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
RPL23A-206ENST00000496182 RAPGEF2Q9Y4G8 1499 aa24.95■■□□□ 1.58
RPL23A-206ENST00000496182 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
RPL23A-206ENST00000496182 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
RPL23A-206ENST00000496182 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
RPL23A-206ENST00000496182 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms