RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.59
IRF3-229ENST00000601373 CCDC180Q9P1Z9 1646 aa27.28■■□□□ 1.96
IRF3-229ENST00000601373 ABCC9O60706 1549 aa27.18■■□□□ 1.94
IRF3-229ENST00000601373 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
IRF3-229ENST00000601373 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
IRF3-229ENST00000601373 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
IRF3-229ENST00000601373 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
IRF3-229ENST00000601373 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
IRF3-229ENST00000601373 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
IRF3-229ENST00000601373 NACADO15069 1562 aa25.56■■□□□ 1.68
IRF3-229ENST00000601373 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
IRF3-229ENST00000601373 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
IRF3-229ENST00000601373 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
IRF3-229ENST00000601373 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
IRF3-229ENST00000601373 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
IRF3-229ENST00000601373 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
IRF3-229ENST00000601373 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
IRF3-229ENST00000601373 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
IRF3-229ENST00000601373 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
IRF3-229ENST00000601373 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
IRF3-229ENST00000601373 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
IRF3-229ENST00000601373 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
IRF3-229ENST00000601373 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
IRF3-229ENST00000601373 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
IRF3-229ENST00000601373 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
IRF3-229ENST00000601373 WIZO95785 1651 aa23.83■■□□□ 1.4
IRF3-229ENST00000601373 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
IRF3-229ENST00000601373 CUX2O14529 1486 aa23.73■■□□□ 1.39
IRF3-229ENST00000601373 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
IRF3-229ENST00000601373 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
IRF3-229ENST00000601373 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
IRF3-229ENST00000601373 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
IRF3-229ENST00000601373 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
IRF3-229ENST00000601373 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
IRF3-229ENST00000601373 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
IRF3-229ENST00000601373 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
IRF3-229ENST00000601373 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
IRF3-229ENST00000601373 NESP48681 1621 aa23.21■■□□□ 1.31
IRF3-229ENST00000601373 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
IRF3-229ENST00000601373 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
IRF3-229ENST00000601373 PDS5BQ9NTI5 1447 aa23.04■■□□□ 1.28
IRF3-229ENST00000601373 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
IRF3-229ENST00000601373 CFTRP13569 1480 aa22.92■■□□□ 1.26
IRF3-229ENST00000601373 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
IRF3-229ENST00000601373 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
IRF3-229ENST00000601373 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
IRF3-229ENST00000601373 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
IRF3-229ENST00000601373 PRDM2Q13029 1718 aa22.77■■□□□ 1.23
IRF3-229ENST00000601373 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
IRF3-229ENST00000601373 WDR62O43379 1518 aa22.75■■□□□ 1.23
IRF3-229ENST00000601373 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
IRF3-229ENST00000601373 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
IRF3-229ENST00000601373 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
IRF3-229ENST00000601373 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
IRF3-229ENST00000601373 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
IRF3-229ENST00000601373 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
IRF3-229ENST00000601373 CUX1P39880 1505 aa22.5■■□□□ 1.19
IRF3-229ENST00000601373 EEA1Q15075 1411 aa22.45■■□□□ 1.18
IRF3-229ENST00000601373 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
IRF3-229ENST00000601373 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
IRF3-229ENST00000601373 SOGA1O94964 1423 aa22.37■■□□□ 1.17
IRF3-229ENST00000601373 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
IRF3-229ENST00000601373 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
IRF3-229ENST00000601373 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
IRF3-229ENST00000601373 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
IRF3-229ENST00000601373 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
IRF3-229ENST00000601373 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
IRF3-229ENST00000601373 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
IRF3-229ENST00000601373 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
IRF3-229ENST00000601373 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
IRF3-229ENST00000601373 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
IRF3-229ENST00000601373 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
IRF3-229ENST00000601373 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
IRF3-229ENST00000601373 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
IRF3-229ENST00000601373 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
IRF3-229ENST00000601373 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
IRF3-229ENST00000601373 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
IRF3-229ENST00000601373 KIF21BO75037 1637 aa22.08■■□□□ 1.13
IRF3-229ENST00000601373 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
IRF3-229ENST00000601373 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
IRF3-229ENST00000601373 IGF1RP08069 1367 aa22.01■■□□□ 1.11
IRF3-229ENST00000601373 CYB5RLQ6IPT4 315 aa22.01■■□□□ 1.11
IRF3-229ENST00000601373 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
IRF3-229ENST00000601373 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
IRF3-229ENST00000601373 WDR97A6NE52 1622 aa22■■□□□ 1.11
IRF3-229ENST00000601373 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
IRF3-229ENST00000601373 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
IRF3-229ENST00000601373 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
IRF3-229ENST00000601373 UBTFP17480 764 aaKnown RBP21.98■■□□□ 1.11
IRF3-229ENST00000601373 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
IRF3-229ENST00000601373 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
IRF3-229ENST00000601373 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
IRF3-229ENST00000601373 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
IRF3-229ENST00000601373 CARMIL1Q5VZK9 1371 aa21.91■■□□□ 1.1
IRF3-229ENST00000601373 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.09
IRF3-229ENST00000601373 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.092e-9■■■■□ 26.5
IRF3-229ENST00000601373 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
IRF3-229ENST00000601373 CUL7Q14999 1698 aa21.85■■□□□ 1.09
IRF3-229ENST00000601373 FBLN2P98095 1184 aa21.85■■□□□ 1.09
IRF3-229ENST00000601373 CHD1O14646 1710 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms