RNA–Protein interactions for RNA: ENST00000522738.1

NDRG1-224, Transcript of N-myc downstream regulated 1, humanhuman

TSL 5

Gene NDRG1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-224ENST00000522738 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
NDRG1-224ENST00000522738 ABCC9O60706 1549 aa26.02■■□□□ 1.76
NDRG1-224ENST00000522738 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
NDRG1-224ENST00000522738 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
NDRG1-224ENST00000522738 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
NDRG1-224ENST00000522738 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
NDRG1-224ENST00000522738 NACADO15069 1562 aa24.35■■□□□ 1.49
NDRG1-224ENST00000522738 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
NDRG1-224ENST00000522738 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
NDRG1-224ENST00000522738 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
NDRG1-224ENST00000522738 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
NDRG1-224ENST00000522738 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
NDRG1-224ENST00000522738 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
NDRG1-224ENST00000522738 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
NDRG1-224ENST00000522738 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
NDRG1-224ENST00000522738 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
NDRG1-224ENST00000522738 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
NDRG1-224ENST00000522738 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
NDRG1-224ENST00000522738 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
NDRG1-224ENST00000522738 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
NDRG1-224ENST00000522738 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
NDRG1-224ENST00000522738 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
NDRG1-224ENST00000522738 NESP48681 1621 aa22.37■■□□□ 1.17
NDRG1-224ENST00000522738 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
NDRG1-224ENST00000522738 DNAJC5Q9H3Z4 198 aa22.35■■□□□ 1.17
NDRG1-224ENST00000522738 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
NDRG1-224ENST00000522738 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
NDRG1-224ENST00000522738 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
NDRG1-224ENST00000522738 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
NDRG1-224ENST00000522738 CUX2O14529 1486 aa22.24■■□□□ 1.15
NDRG1-224ENST00000522738 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
NDRG1-224ENST00000522738 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
NDRG1-224ENST00000522738 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
NDRG1-224ENST00000522738 WIZO95785 1651 aa22.04■■□□□ 1.12
NDRG1-224ENST00000522738 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
NDRG1-224ENST00000522738 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
NDRG1-224ENST00000522738 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
NDRG1-224ENST00000522738 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
NDRG1-224ENST00000522738 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
NDRG1-224ENST00000522738 WDR62O43379 1518 aa21.69■■□□□ 1.06
NDRG1-224ENST00000522738 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
NDRG1-224ENST00000522738 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
NDRG1-224ENST00000522738 TOP2AP11388 1531 aaKnown RBP21.62■■□□□ 1.05
NDRG1-224ENST00000522738 CFTRP13569 1480 aa21.56■■□□□ 1.04
NDRG1-224ENST00000522738 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
NDRG1-224ENST00000522738 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
NDRG1-224ENST00000522738 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
NDRG1-224ENST00000522738 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
NDRG1-224ENST00000522738 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
NDRG1-224ENST00000522738 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
NDRG1-224ENST00000522738 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
NDRG1-224ENST00000522738 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
NDRG1-224ENST00000522738 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
NDRG1-224ENST00000522738 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
NDRG1-224ENST00000522738 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
NDRG1-224ENST00000522738 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
NDRG1-224ENST00000522738 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
NDRG1-224ENST00000522738 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.962e-8■■■■■ 27.9
NDRG1-224ENST00000522738 CHD1O14646 1710 aa21.07■□□□□ 0.96
NDRG1-224ENST00000522738 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
NDRG1-224ENST00000522738 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
NDRG1-224ENST00000522738 ABCC8Q09428 1581 aa21.02■□□□□ 0.95
NDRG1-224ENST00000522738 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
NDRG1-224ENST00000522738 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
NDRG1-224ENST00000522738 FBLN2P98095 1184 aa20.96■□□□□ 0.95
NDRG1-224ENST00000522738 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
NDRG1-224ENST00000522738 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
NDRG1-224ENST00000522738 CUX1P39880 1505 aa20.89■□□□□ 0.94
NDRG1-224ENST00000522738 SOGA1O94964 1423 aa20.89■□□□□ 0.94
NDRG1-224ENST00000522738 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
NDRG1-224ENST00000522738 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
NDRG1-224ENST00000522738 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
NDRG1-224ENST00000522738 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
NDRG1-224ENST00000522738 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
NDRG1-224ENST00000522738 PBRM1Q86U86 1689 aa20.73■□□□□ 0.91
NDRG1-224ENST00000522738 CLASP1Q7Z460 1538 aa20.71■□□□□ 0.91
NDRG1-224ENST00000522738 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
NDRG1-224ENST00000522738 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
NDRG1-224ENST00000522738 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
NDRG1-224ENST00000522738 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
NDRG1-224ENST00000522738 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
NDRG1-224ENST00000522738 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
NDRG1-224ENST00000522738 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
NDRG1-224ENST00000522738 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
NDRG1-224ENST00000522738 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
NDRG1-224ENST00000522738 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
NDRG1-224ENST00000522738 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
NDRG1-224ENST00000522738 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
NDRG1-224ENST00000522738 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
NDRG1-224ENST00000522738 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
NDRG1-224ENST00000522738 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
NDRG1-224ENST00000522738 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
NDRG1-224ENST00000522738 NUP160Q12769 1436 aa20.36■□□□□ 0.85
NDRG1-224ENST00000522738 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
NDRG1-224ENST00000522738 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
NDRG1-224ENST00000522738 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
NDRG1-224ENST00000522738 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
NDRG1-224ENST00000522738 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
NDRG1-224ENST00000522738 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
NDRG1-224ENST00000522738 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms