RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
IRF3-213ENST00000596765 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
IRF3-213ENST00000596765 ABCC9O60706 1549 aa28.09■■■□□ 2.09
IRF3-213ENST00000596765 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
IRF3-213ENST00000596765 NACADO15069 1562 aa26.9■■□□□ 1.9
IRF3-213ENST00000596765 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
IRF3-213ENST00000596765 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
IRF3-213ENST00000596765 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
IRF3-213ENST00000596765 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
IRF3-213ENST00000596765 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
IRF3-213ENST00000596765 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
IRF3-213ENST00000596765 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.792e-7■■■■□ 22.6
IRF3-213ENST00000596765 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
IRF3-213ENST00000596765 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
IRF3-213ENST00000596765 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
IRF3-213ENST00000596765 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
IRF3-213ENST00000596765 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
IRF3-213ENST00000596765 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
IRF3-213ENST00000596765 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
IRF3-213ENST00000596765 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
IRF3-213ENST00000596765 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
IRF3-213ENST00000596765 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
IRF3-213ENST00000596765 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
IRF3-213ENST00000596765 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
IRF3-213ENST00000596765 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
IRF3-213ENST00000596765 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
IRF3-213ENST00000596765 WIZO95785 1651 aa24.64■■□□□ 1.53
IRF3-213ENST00000596765 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
IRF3-213ENST00000596765 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
IRF3-213ENST00000596765 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
IRF3-213ENST00000596765 NESP48681 1621 aa24.35■■□□□ 1.49
IRF3-213ENST00000596765 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
IRF3-213ENST00000596765 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
IRF3-213ENST00000596765 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
IRF3-213ENST00000596765 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
IRF3-213ENST00000596765 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
IRF3-213ENST00000596765 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
IRF3-213ENST00000596765 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
IRF3-213ENST00000596765 CFTRP13569 1480 aa23.97■■□□□ 1.43
IRF3-213ENST00000596765 CUX2O14529 1486 aa23.94■■□□□ 1.42
IRF3-213ENST00000596765 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
IRF3-213ENST00000596765 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
IRF3-213ENST00000596765 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
IRF3-213ENST00000596765 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
IRF3-213ENST00000596765 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
IRF3-213ENST00000596765 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
IRF3-213ENST00000596765 WDR62O43379 1518 aa23.73■■□□□ 1.39
IRF3-213ENST00000596765 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
IRF3-213ENST00000596765 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
IRF3-213ENST00000596765 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
IRF3-213ENST00000596765 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
IRF3-213ENST00000596765 CUX1P39880 1505 aa23.33■■□□□ 1.32
IRF3-213ENST00000596765 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
IRF3-213ENST00000596765 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
IRF3-213ENST00000596765 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
IRF3-213ENST00000596765 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
IRF3-213ENST00000596765 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
IRF3-213ENST00000596765 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
IRF3-213ENST00000596765 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
IRF3-213ENST00000596765 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
IRF3-213ENST00000596765 SOGA1O94964 1423 aa23.13■■□□□ 1.29
IRF3-213ENST00000596765 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
IRF3-213ENST00000596765 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
IRF3-213ENST00000596765 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.292e-7■■■■■ 27
IRF3-213ENST00000596765 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
IRF3-213ENST00000596765 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
IRF3-213ENST00000596765 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
IRF3-213ENST00000596765 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
IRF3-213ENST00000596765 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
IRF3-213ENST00000596765 CHD1O14646 1710 aa22.96■■□□□ 1.27
IRF3-213ENST00000596765 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
IRF3-213ENST00000596765 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
IRF3-213ENST00000596765 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
IRF3-213ENST00000596765 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
IRF3-213ENST00000596765 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
IRF3-213ENST00000596765 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
IRF3-213ENST00000596765 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
IRF3-213ENST00000596765 FBLN2P98095 1184 aa22.73■■□□□ 1.23
IRF3-213ENST00000596765 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
IRF3-213ENST00000596765 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
IRF3-213ENST00000596765 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
IRF3-213ENST00000596765 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
IRF3-213ENST00000596765 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
IRF3-213ENST00000596765 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
IRF3-213ENST00000596765 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
IRF3-213ENST00000596765 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
IRF3-213ENST00000596765 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
IRF3-213ENST00000596765 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
IRF3-213ENST00000596765 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
IRF3-213ENST00000596765 IGF1RP08069 1367 aa22.55■■□□□ 1.2
IRF3-213ENST00000596765 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
IRF3-213ENST00000596765 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
IRF3-213ENST00000596765 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.19
IRF3-213ENST00000596765 NUP160Q12769 1436 aa22.51■■□□□ 1.19
IRF3-213ENST00000596765 CUL7Q14999 1698 aa22.46■■□□□ 1.19
IRF3-213ENST00000596765 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
IRF3-213ENST00000596765 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
IRF3-213ENST00000596765 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
IRF3-213ENST00000596765 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
IRF3-213ENST00000596765 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms