RNA–Protein interactions for RNA: ENST00000472628.1

RPL23A-205, Transcript of ribosomal protein L23a, humanhuman

TSL 1 (best) BASIC

Gene RPL23A, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-205ENST00000472628 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
RPL23A-205ENST00000472628 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
RPL23A-205ENST00000472628 ABCC9O60706 1549 aa23.23■■□□□ 1.31
RPL23A-205ENST00000472628 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
RPL23A-205ENST00000472628 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
RPL23A-205ENST00000472628 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
RPL23A-205ENST00000472628 NACADO15069 1562 aa22.25■■□□□ 1.15
RPL23A-205ENST00000472628 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
RPL23A-205ENST00000472628 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
RPL23A-205ENST00000472628 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
RPL23A-205ENST00000472628 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
RPL23A-205ENST00000472628 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
RPL23A-205ENST00000472628 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
RPL23A-205ENST00000472628 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
RPL23A-205ENST00000472628 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
RPL23A-205ENST00000472628 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
RPL23A-205ENST00000472628 CC2D2AQ9P2K1 1620 aa20.97■□□□□ 0.95
RPL23A-205ENST00000472628 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
RPL23A-205ENST00000472628 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
RPL23A-205ENST00000472628 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
RPL23A-205ENST00000472628 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
RPL23A-205ENST00000472628 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
RPL23A-205ENST00000472628 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
RPL23A-205ENST00000472628 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
RPL23A-205ENST00000472628 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
RPL23A-205ENST00000472628 WIZO95785 1651 aa20.51■□□□□ 0.87
RPL23A-205ENST00000472628 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
RPL23A-205ENST00000472628 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
RPL23A-205ENST00000472628 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
RPL23A-205ENST00000472628 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
RPL23A-205ENST00000472628 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
RPL23A-205ENST00000472628 NESP48681 1621 aa20.16■□□□□ 0.82
RPL23A-205ENST00000472628 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
RPL23A-205ENST00000472628 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
RPL23A-205ENST00000472628 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
RPL23A-205ENST00000472628 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
RPL23A-205ENST00000472628 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
RPL23A-205ENST00000472628 CFTRP13569 1480 aa19.88■□□□□ 0.77
RPL23A-205ENST00000472628 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
RPL23A-205ENST00000472628 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
RPL23A-205ENST00000472628 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
RPL23A-205ENST00000472628 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
RPL23A-205ENST00000472628 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
RPL23A-205ENST00000472628 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
RPL23A-205ENST00000472628 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
RPL23A-205ENST00000472628 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
RPL23A-205ENST00000472628 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
RPL23A-205ENST00000472628 CUX2O14529 1486 aa19.61■□□□□ 0.73
RPL23A-205ENST00000472628 WDR62O43379 1518 aa19.58■□□□□ 0.73
RPL23A-205ENST00000472628 TOPBP1Q92547 1522 aa19.48■□□□□ 0.71
RPL23A-205ENST00000472628 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
RPL23A-205ENST00000472628 CUX1P39880 1505 aa19.41■□□□□ 0.7
RPL23A-205ENST00000472628 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
RPL23A-205ENST00000472628 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
RPL23A-205ENST00000472628 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
RPL23A-205ENST00000472628 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
RPL23A-205ENST00000472628 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
RPL23A-205ENST00000472628 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.68
RPL23A-205ENST00000472628 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
RPL23A-205ENST00000472628 SYNJ1O43426 1573 aa19.27■□□□□ 0.67
RPL23A-205ENST00000472628 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
RPL23A-205ENST00000472628 SOGA1O94964 1423 aa19.25■□□□□ 0.67
RPL23A-205ENST00000472628 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
RPL23A-205ENST00000472628 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
RPL23A-205ENST00000472628 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.666e-9■■■■□ 24.4
RPL23A-205ENST00000472628 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
RPL23A-205ENST00000472628 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
RPL23A-205ENST00000472628 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
RPL23A-205ENST00000472628 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
RPL23A-205ENST00000472628 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
RPL23A-205ENST00000472628 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
RPL23A-205ENST00000472628 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
RPL23A-205ENST00000472628 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
RPL23A-205ENST00000472628 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
RPL23A-205ENST00000472628 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
RPL23A-205ENST00000472628 FBLN2P98095 1184 aa18.95■□□□□ 0.62
RPL23A-205ENST00000472628 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
RPL23A-205ENST00000472628 CHD1O14646 1710 aa18.93■□□□□ 0.62
RPL23A-205ENST00000472628 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
RPL23A-205ENST00000472628 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
RPL23A-205ENST00000472628 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
RPL23A-205ENST00000472628 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
RPL23A-205ENST00000472628 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
RPL23A-205ENST00000472628 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
RPL23A-205ENST00000472628 IGF1RP08069 1367 aa18.82■□□□□ 0.6
RPL23A-205ENST00000472628 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
RPL23A-205ENST00000472628 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
RPL23A-205ENST00000472628 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
RPL23A-205ENST00000472628 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
RPL23A-205ENST00000472628 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
RPL23A-205ENST00000472628 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
RPL23A-205ENST00000472628 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
RPL23A-205ENST00000472628 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
RPL23A-205ENST00000472628 CUL7Q14999 1698 aa18.65■□□□□ 0.58
RPL23A-205ENST00000472628 NUP160Q12769 1436 aa18.65■□□□□ 0.58
RPL23A-205ENST00000472628 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
RPL23A-205ENST00000472628 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
RPL23A-205ENST00000472628 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
RPL23A-205ENST00000472628 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
RPL23A-205ENST00000472628 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms