RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
ATF3-203ENST00000366981 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
ATF3-203ENST00000366981 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
ATF3-203ENST00000366981 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
ATF3-203ENST00000366981 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
ATF3-203ENST00000366981 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
ATF3-203ENST00000366981 ABCC9O60706 1549 aa14.55□□□□□ -0.08
ATF3-203ENST00000366981 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
ATF3-203ENST00000366981 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
ATF3-203ENST00000366981 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
ATF3-203ENST00000366981 FOXD1Q16676 465 aa14.05□□□□□ -0.16
ATF3-203ENST00000366981 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.17
ATF3-203ENST00000366981 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
ATF3-203ENST00000366981 NACADO15069 1562 aa13.78□□□□□ -0.2
ATF3-203ENST00000366981 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
ATF3-203ENST00000366981 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
ATF3-203ENST00000366981 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
ATF3-203ENST00000366981 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
ATF3-203ENST00000366981 UNC13AQ9UPW8 1703 aa13.45□□□□□ -0.26
ATF3-203ENST00000366981 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATF3-203ENST00000366981 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
ATF3-203ENST00000366981 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
ATF3-203ENST00000366981 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
ATF3-203ENST00000366981 MSH5O43196 834 aa13.22□□□□□ -0.29
ATF3-203ENST00000366981 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
ATF3-203ENST00000366981 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
ATF3-203ENST00000366981 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
ATF3-203ENST00000366981 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
ATF3-203ENST00000366981 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
ATF3-203ENST00000366981 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
ATF3-203ENST00000366981 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
ATF3-203ENST00000366981 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
ATF3-203ENST00000366981 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
ATF3-203ENST00000366981 KCNA4P22459 653 aa13.01□□□□□ -0.33
ATF3-203ENST00000366981 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
ATF3-203ENST00000366981 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
ATF3-203ENST00000366981 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ATF3-203ENST00000366981 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
ATF3-203ENST00000366981 WIZO95785 1651 aa12.95□□□□□ -0.34
ATF3-203ENST00000366981 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
ATF3-203ENST00000366981 CUX2O14529 1486 aa12.83□□□□□ -0.36
ATF3-203ENST00000366981 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
ATF3-203ENST00000366981 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
ATF3-203ENST00000366981 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
ATF3-203ENST00000366981 NCAPD3P42695 1498 aa12.71□□□□□ -0.38
ATF3-203ENST00000366981 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
ATF3-203ENST00000366981 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
ATF3-203ENST00000366981 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
ATF3-203ENST00000366981 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
ATF3-203ENST00000366981 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
ATF3-203ENST00000366981 PRDM2Q13029 1718 aa12.47□□□□□ -0.41
ATF3-203ENST00000366981 TRIM41Q8WV44 630 aa12.45□□□□□ -0.42
ATF3-203ENST00000366981 CFTRP13569 1480 aa12.41□□□□□ -0.42
ATF3-203ENST00000366981 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
ATF3-203ENST00000366981 ABCC8Q09428 1581 aa12.36□□□□□ -0.43
ATF3-203ENST00000366981 NESP48681 1621 aa12.36□□□□□ -0.43
ATF3-203ENST00000366981 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
ATF3-203ENST00000366981 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
ATF3-203ENST00000366981 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
ATF3-203ENST00000366981 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
ATF3-203ENST00000366981 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
ATF3-203ENST00000366981 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
ATF3-203ENST00000366981 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
ATF3-203ENST00000366981 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
ATF3-203ENST00000366981 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
ATF3-203ENST00000366981 CUX1P39880 1505 aa12.21□□□□□ -0.46
ATF3-203ENST00000366981 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
ATF3-203ENST00000366981 EEA1Q15075 1411 aa12.17□□□□□ -0.46
ATF3-203ENST00000366981 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
ATF3-203ENST00000366981 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
ATF3-203ENST00000366981 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
ATF3-203ENST00000366981 SOGA1O94964 1423 aa12.11□□□□□ -0.47
ATF3-203ENST00000366981 WDR62O43379 1518 aa12.11□□□□□ -0.47
ATF3-203ENST00000366981 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
ATF3-203ENST00000366981 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
ATF3-203ENST00000366981 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
ATF3-203ENST00000366981 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
ATF3-203ENST00000366981 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
ATF3-203ENST00000366981 KIF21BO75037 1637 aa12.06□□□□□ -0.48
ATF3-203ENST00000366981 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
ATF3-203ENST00000366981 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
ATF3-203ENST00000366981 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
ATF3-203ENST00000366981 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
ATF3-203ENST00000366981 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
ATF3-203ENST00000366981 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
ATF3-203ENST00000366981 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
ATF3-203ENST00000366981 ZBTB22O15209 634 aa11.99□□□□□ -0.49
ATF3-203ENST00000366981 ABCA10Q8WWZ4 1543 aa11.99□□□□□ -0.49
ATF3-203ENST00000366981 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
ATF3-203ENST00000366981 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 ERICH3Q5RHP9 1530 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
ATF3-203ENST00000366981 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
ATF3-203ENST00000366981 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
ATF3-203ENST00000366981 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
ATF3-203ENST00000366981 TARBP1Q13395 1621 aaKnown RBP11.95□□□□□ -0.5
ATF3-203ENST00000366981 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms