RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
HMGN2-201ENST00000361427 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
HMGN2-201ENST00000361427 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
HMGN2-201ENST00000361427 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
HMGN2-201ENST00000361427 FOXD1Q16676 465 aa22.89■■□□□ 1.25
HMGN2-201ENST00000361427 POTEDQ86YR6 584 aa21.82■■□□□ 1.08
HMGN2-201ENST00000361427 MSH5O43196 834 aa21.53■■□□□ 1.04
HMGN2-201ENST00000361427 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
HMGN2-201ENST00000361427 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
HMGN2-201ENST00000361427 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
HMGN2-201ENST00000361427 ADRA2BP18089 450 aa20.97■□□□□ 0.95
HMGN2-201ENST00000361427 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
HMGN2-201ENST00000361427 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
HMGN2-201ENST00000361427 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
HMGN2-201ENST00000361427 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
HMGN2-201ENST00000361427 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
HMGN2-201ENST00000361427 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
HMGN2-201ENST00000361427 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
HMGN2-201ENST00000361427 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
HMGN2-201ENST00000361427 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
HMGN2-201ENST00000361427 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
HMGN2-201ENST00000361427 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
HMGN2-201ENST00000361427 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
HMGN2-201ENST00000361427 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
HMGN2-201ENST00000361427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.43e-13■■■□□ 16.2
HMGN2-201ENST00000361427 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
HMGN2-201ENST00000361427 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
HMGN2-201ENST00000361427 DSG3P32926 999 aa17.06■□□□□ 0.32
HMGN2-201ENST00000361427 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
HMGN2-201ENST00000361427 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
HMGN2-201ENST00000361427 POTEHQ6S545 545 aa17■□□□□ 0.31
HMGN2-201ENST00000361427 CAPN15O75808 1086 aa16.99■□□□□ 0.31
HMGN2-201ENST00000361427 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
HMGN2-201ENST00000361427 KCNA4P22459 653 aa16.68■□□□□ 0.26
HMGN2-201ENST00000361427 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
HMGN2-201ENST00000361427 ABCB7O75027 752 aa16.58■□□□□ 0.24
HMGN2-201ENST00000361427 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
HMGN2-201ENST00000361427 APLP2Q06481 763 aa16.55■□□□□ 0.24
HMGN2-201ENST00000361427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
HMGN2-201ENST00000361427 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
HMGN2-201ENST00000361427 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
HMGN2-201ENST00000361427 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
HMGN2-201ENST00000361427 POLA2Q14181 598 aa16.12■□□□□ 0.17
HMGN2-201ENST00000361427 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
HMGN2-201ENST00000361427 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
HMGN2-201ENST00000361427 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
HMGN2-201ENST00000361427 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
HMGN2-201ENST00000361427 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
HMGN2-201ENST00000361427 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
HMGN2-201ENST00000361427 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
HMGN2-201ENST00000361427 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
HMGN2-201ENST00000361427 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
HMGN2-201ENST00000361427 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
HMGN2-201ENST00000361427 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
HMGN2-201ENST00000361427 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
HMGN2-201ENST00000361427 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
HMGN2-201ENST00000361427 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
HMGN2-201ENST00000361427 HAX1O00165 279 aa15.43■□□□□ 0.06
HMGN2-201ENST00000361427 ZBTB22O15209 634 aa15.35■□□□□ 0.05
HMGN2-201ENST00000361427 EVX2Q03828 476 aa15.29■□□□□ 0.04
HMGN2-201ENST00000361427 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
HMGN2-201ENST00000361427 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
HMGN2-201ENST00000361427 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
HMGN2-201ENST00000361427 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
HMGN2-201ENST00000361427 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
HMGN2-201ENST00000361427 CCDC180Q9P1Z9 1646 aa15.13■□□□□ 0.01
HMGN2-201ENST00000361427 FBLN2P98095 1184 aa15.11■□□□□ 0.01
HMGN2-201ENST00000361427 PRKAR2AP13861 404 aaKnown RBP15.07■□□□□ 0
HMGN2-201ENST00000361427 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
HMGN2-201ENST00000361427 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
HMGN2-201ENST00000361427 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
HMGN2-201ENST00000361427 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
HMGN2-201ENST00000361427 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
HMGN2-201ENST00000361427 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
HMGN2-201ENST00000361427 GABBR2O75899 941 aa14.88□□□□□ -0.03
HMGN2-201ENST00000361427 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
HMGN2-201ENST00000361427 ABCC9O60706 1549 aa14.82□□□□□ -0.04
HMGN2-201ENST00000361427 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
HMGN2-201ENST00000361427 LHX8Q68G74 356 aa14.75□□□□□ -0.05
HMGN2-201ENST00000361427 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
HMGN2-201ENST00000361427 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
HMGN2-201ENST00000361427 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
HMGN2-201ENST00000361427 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
HMGN2-201ENST00000361427 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
HMGN2-201ENST00000361427 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
HMGN2-201ENST00000361427 CLCN6P51797 869 aa14.46□□□□□ -0.09
HMGN2-201ENST00000361427 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
HMGN2-201ENST00000361427 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
HMGN2-201ENST00000361427 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
HMGN2-201ENST00000361427 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
HMGN2-201ENST00000361427 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
HMGN2-201ENST00000361427 NACADO15069 1562 aa14.26□□□□□ -0.13
HMGN2-201ENST00000361427 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
HMGN2-201ENST00000361427 GALR2O43603 387 aaPredicted RBP14.2□□□□□ -0.14
HMGN2-201ENST00000361427 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
HMGN2-201ENST00000361427 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
HMGN2-201ENST00000361427 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
HMGN2-201ENST00000361427 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
HMGN2-201ENST00000361427 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
HMGN2-201ENST00000361427 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms