RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 AEBP2Q6ZN18 517 aaPredicted RBP29.49■■■□□ 2.31
HMGN2-210ENST00000619352 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
HMGN2-210ENST00000619352 SENP3Q9H4L4 574 aaPredicted RBP25.31■■□□□ 1.64
HMGN2-210ENST00000619352 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
HMGN2-210ENST00000619352 FOXD1Q16676 465 aa23.62■■□□□ 1.37
HMGN2-210ENST00000619352 POTEDQ86YR6 584 aa22.88■■□□□ 1.25
HMGN2-210ENST00000619352 MSH5O43196 834 aa22.41■■□□□ 1.18
HMGN2-210ENST00000619352 PIAS4Q8N2W9 510 aaPredicted RBP21.88■■□□□ 1.09
HMGN2-210ENST00000619352 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
HMGN2-210ENST00000619352 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
HMGN2-210ENST00000619352 ADRA2BP18089 450 aa21.43■■□□□ 1.02
HMGN2-210ENST00000619352 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
HMGN2-210ENST00000619352 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
HMGN2-210ENST00000619352 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
HMGN2-210ENST00000619352 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
HMGN2-210ENST00000619352 RNF39Q9H2S5 420 aa19.05■□□□□ 0.64
HMGN2-210ENST00000619352 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
HMGN2-210ENST00000619352 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
HMGN2-210ENST00000619352 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
HMGN2-210ENST00000619352 C1QBPQ07021 282 aaKnown RBP18.77■□□□□ 0.6
HMGN2-210ENST00000619352 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
HMGN2-210ENST00000619352 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
HMGN2-210ENST00000619352 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
HMGN2-210ENST00000619352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.483e-13■■■□□ 16.2
HMGN2-210ENST00000619352 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
HMGN2-210ENST00000619352 POTEHQ6S545 545 aa17.81■□□□□ 0.44
HMGN2-210ENST00000619352 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
HMGN2-210ENST00000619352 DSG3P32926 999 aa17.61■□□□□ 0.41
HMGN2-210ENST00000619352 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
HMGN2-210ENST00000619352 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
HMGN2-210ENST00000619352 CAPN15O75808 1086 aa17.48■□□□□ 0.39
HMGN2-210ENST00000619352 APLP2Q06481 763 aa17.11■□□□□ 0.33
HMGN2-210ENST00000619352 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
HMGN2-210ENST00000619352 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
HMGN2-210ENST00000619352 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
HMGN2-210ENST00000619352 ABCB7O75027 752 aa16.98■□□□□ 0.31
HMGN2-210ENST00000619352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
HMGN2-210ENST00000619352 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
HMGN2-210ENST00000619352 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
HMGN2-210ENST00000619352 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
HMGN2-210ENST00000619352 KCNA4P22459 653 aa16.74■□□□□ 0.27
HMGN2-210ENST00000619352 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
HMGN2-210ENST00000619352 POLA2Q14181 598 aa16.48■□□□□ 0.23
HMGN2-210ENST00000619352 SP7Q8TDD2 431 aaPredicted RBP16.41■□□□□ 0.22
HMGN2-210ENST00000619352 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
HMGN2-210ENST00000619352 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
HMGN2-210ENST00000619352 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
HMGN2-210ENST00000619352 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
HMGN2-210ENST00000619352 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
HMGN2-210ENST00000619352 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
HMGN2-210ENST00000619352 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
HMGN2-210ENST00000619352 HAX1O00165 279 aa15.98■□□□□ 0.15
HMGN2-210ENST00000619352 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
HMGN2-210ENST00000619352 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
HMGN2-210ENST00000619352 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
HMGN2-210ENST00000619352 EVX2Q03828 476 aa15.74■□□□□ 0.11
HMGN2-210ENST00000619352 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
HMGN2-210ENST00000619352 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
HMGN2-210ENST00000619352 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
HMGN2-210ENST00000619352 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
HMGN2-210ENST00000619352 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
HMGN2-210ENST00000619352 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
HMGN2-210ENST00000619352 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
HMGN2-210ENST00000619352 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
HMGN2-210ENST00000619352 FBLN2P98095 1184 aa15.45■□□□□ 0.06
HMGN2-210ENST00000619352 GABBR2O75899 941 aa15.39■□□□□ 0.05
HMGN2-210ENST00000619352 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
HMGN2-210ENST00000619352 ZBTB22O15209 634 aa15.37■□□□□ 0.05
HMGN2-210ENST00000619352 LHX8Q68G74 356 aa15.36■□□□□ 0.05
HMGN2-210ENST00000619352 SSUH2Q9Y2M2 353 aa15.34■□□□□ 0.05
HMGN2-210ENST00000619352 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
HMGN2-210ENST00000619352 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
HMGN2-210ENST00000619352 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
HMGN2-210ENST00000619352 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
HMGN2-210ENST00000619352 CLCN6P51797 869 aa15.09■□□□□ 0.01
HMGN2-210ENST00000619352 POTEIP0CG38 1075 aa15.05■□□□□ -0
HMGN2-210ENST00000619352 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
HMGN2-210ENST00000619352 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
HMGN2-210ENST00000619352 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
HMGN2-210ENST00000619352 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
HMGN2-210ENST00000619352 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
HMGN2-210ENST00000619352 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
HMGN2-210ENST00000619352 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
HMGN2-210ENST00000619352 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
HMGN2-210ENST00000619352 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
HMGN2-210ENST00000619352 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.08
HMGN2-210ENST00000619352 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
HMGN2-210ENST00000619352 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
HMGN2-210ENST00000619352 POTEMA6NI47 508 aa14.47□□□□□ -0.09
HMGN2-210ENST00000619352 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
HMGN2-210ENST00000619352 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
HMGN2-210ENST00000619352 PCDH10Q9P2E7 1040 aa14.42□□□□□ -0.1
HMGN2-210ENST00000619352 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
HMGN2-210ENST00000619352 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
HMGN2-210ENST00000619352 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
HMGN2-210ENST00000619352 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
HMGN2-210ENST00000619352 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
HMGN2-210ENST00000619352 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
HMGN2-210ENST00000619352 C7P10643 843 aa14.27□□□□□ -0.13
HMGN2-210ENST00000619352 SLC39A7Q92504 469 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms