RNA–Protein interactions for RNA: ENST00000538980.5

RAP1B-219, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-219ENST00000538980 NISCHQ9Y2I1 1504 aa48.7■■■■■ 5.39
RAP1B-219ENST00000538980 CCDC180Q9P1Z9 1646 aa43.37■■■■■ 4.53
RAP1B-219ENST00000538980 ABCC9O60706 1549 aa42.36■■■■■ 4.37
RAP1B-219ENST00000538980 RB1CC1Q8TDY2 1594 aa40.78■■■■■ 4.12
RAP1B-219ENST00000538980 NACADO15069 1562 aa40.71■■■■■ 4.11
RAP1B-219ENST00000538980 DCAF8L2P0C7V8 631 aa40.67■■■■■ 4.1
RAP1B-219ENST00000538980 ZCCHC6Q5VYS8 1495 aaKnown RBP40.59■■■■■ 4.09
RAP1B-219ENST00000538980 MYO15BQ96JP2 1530 aa40.43■■■■■ 4.06
RAP1B-219ENST00000538980 DCAF1Q9Y4B6 1507 aa40.28■■■■■ 4.04
RAP1B-219ENST00000538980 UNC13AQ9UPW8 1703 aa39.93■■■■□ 3.98
RAP1B-219ENST00000538980 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
RAP1B-219ENST00000538980 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
RAP1B-219ENST00000538980 BICRAQ9NZM4 1560 aa39.51■■■■□ 3.92
RAP1B-219ENST00000538980 DNAJC5BQ9UF47 199 aa39.2■■■■□ 3.87
RAP1B-219ENST00000538980 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
RAP1B-219ENST00000538980 EIF4G1Q04637 1599 aaKnown RBP38.48■■■■□ 3.75
RAP1B-219ENST00000538980 CC2D2AQ9P2K1 1620 aa38.34■■■■□ 3.73
RAP1B-219ENST00000538980 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
RAP1B-219ENST00000538980 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
RAP1B-219ENST00000538980 BAZ1AQ9NRL2 1556 aaPredicted RBP37.77■■■■□ 3.64
RAP1B-219ENST00000538980 ATAD2BQ9ULI0 1458 aa37.56■■■■□ 3.6
RAP1B-219ENST00000538980 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
RAP1B-219ENST00000538980 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
RAP1B-219ENST00000538980 NCAPD3P42695 1498 aa37.51■■■■□ 3.59
RAP1B-219ENST00000538980 PEG3Q9GZU2 1588 aa37.42■■■■□ 3.58
RAP1B-219ENST00000538980 HMGXB3Q12766 1538 aa37.39■■■■□ 3.58
RAP1B-219ENST00000538980 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
RAP1B-219ENST00000538980 WIZO95785 1651 aa37.19■■■■□ 3.54
RAP1B-219ENST00000538980 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
RAP1B-219ENST00000538980 TOP2AP11388 1531 aaKnown RBP36.78■■■■□ 3.48
RAP1B-219ENST00000538980 NESP48681 1621 aa36.66■■■■□ 3.46
RAP1B-219ENST00000538980 DNAJC5Q9H3Z4 198 aa36.65■■■■□ 3.46
RAP1B-219ENST00000538980 LAMC3Q9Y6N6 1575 aa36.58■■■■□ 3.45
RAP1B-219ENST00000538980 ERCC6Q03468 1493 aa36.52■■■■□ 3.44
RAP1B-219ENST00000538980 CADPSQ9ULU8 1353 aa36.42■■■■□ 3.42
RAP1B-219ENST00000538980 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
RAP1B-219ENST00000538980 KIF21AQ7Z4S6 1674 aa36.3■■■■□ 3.4
RAP1B-219ENST00000538980 PDS5BQ9NTI5 1447 aa36.3■■■■□ 3.4
RAP1B-219ENST00000538980 CFTRP13569 1480 aa36.23■■■■□ 3.39
RAP1B-219ENST00000538980 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
RAP1B-219ENST00000538980 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
RAP1B-219ENST00000538980 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
RAP1B-219ENST00000538980 CUX2O14529 1486 aa36.09■■■■□ 3.37
RAP1B-219ENST00000538980 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
RAP1B-219ENST00000538980 CEP164Q9UPV0 1460 aa36.03■■■■□ 3.36
RAP1B-219ENST00000538980 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
RAP1B-219ENST00000538980 WDR62O43379 1518 aa35.84■■■■□ 3.33
RAP1B-219ENST00000538980 URB2Q14146 1524 aaKnown RBP35.69■■■■□ 3.3
RAP1B-219ENST00000538980 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
RAP1B-219ENST00000538980 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
RAP1B-219ENST00000538980 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
RAP1B-219ENST00000538980 IFT140Q96RY7 1462 aa35.24■■■■□ 3.23
RAP1B-219ENST00000538980 CUX1P39880 1505 aa35.23■■■■□ 3.23
RAP1B-219ENST00000538980 POLA1P09884 1462 aaPredicted RBP35.18■■■■□ 3.22
RAP1B-219ENST00000538980 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
RAP1B-219ENST00000538980 TARBP1Q13395 1621 aaKnown RBP35.11■■■■□ 3.21
RAP1B-219ENST00000538980 ZNF608Q9ULD9 1512 aaPredicted RBP35.08■■■■□ 3.21
RAP1B-219ENST00000538980 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
RAP1B-219ENST00000538980 EIF4G3O43432 1585 aaKnown RBP35.01■■■■□ 3.2
RAP1B-219ENST00000538980 SOGA1O94964 1423 aa35.01■■■■□ 3.2
RAP1B-219ENST00000538980 WRNQ14191 1432 aaPredicted RBP eCLIP35■■■■□ 3.19
RAP1B-219ENST00000538980 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
RAP1B-219ENST00000538980 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
RAP1B-219ENST00000538980 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
RAP1B-219ENST00000538980 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
RAP1B-219ENST00000538980 AQRO60306 1485 aaKnown RBP eCLIP34.87■■■■□ 3.171e-6■■■■□ 26.1
RAP1B-219ENST00000538980 TDRD9Q8NDG6 1382 aaKnown RBP34.81■■■■□ 3.16
RAP1B-219ENST00000538980 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.15
RAP1B-219ENST00000538980 TRIM41Q8WV44 630 aa34.75■■■■□ 3.15
RAP1B-219ENST00000538980 ABCA5Q8WWZ7 1642 aa34.66■■■■□ 3.14
RAP1B-219ENST00000538980 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
RAP1B-219ENST00000538980 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
RAP1B-219ENST00000538980 GRIN2BQ13224 1484 aa34.62■■■■□ 3.13
RAP1B-219ENST00000538980 CHD1O14646 1710 aa34.6■■■■□ 3.13
RAP1B-219ENST00000538980 SNAPC4Q5SXM2 1469 aa34.59■■■■□ 3.13
RAP1B-219ENST00000538980 OSCARQ8IYS5 282 aa34.56■■■■□ 3.12
RAP1B-219ENST00000538980 MAGI1Q96QZ7 1491 aaPredicted RBP34.53■■■■□ 3.12
RAP1B-219ENST00000538980 FBLN2P98095 1184 aa34.46■■■■□ 3.11
RAP1B-219ENST00000538980 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
RAP1B-219ENST00000538980 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
RAP1B-219ENST00000538980 CHMP7Q8WUX9 453 aaPredicted RBP34.35■■■■□ 3.09
RAP1B-219ENST00000538980 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
RAP1B-219ENST00000538980 KIF27Q86VH2 1401 aa34.27■■■■□ 3.08
RAP1B-219ENST00000538980 FHAD1B1AJZ9 1412 aa34.22■■■■□ 3.07
RAP1B-219ENST00000538980 GRIN2AQ12879 1464 aa34.19■■■■□ 3.06
RAP1B-219ENST00000538980 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
RAP1B-219ENST00000538980 CUL7Q14999 1698 aa34.1■■■■□ 3.05
RAP1B-219ENST00000538980 RIMBP3CA6NJZ7 1639 aa34.1■■■■□ 3.05
RAP1B-219ENST00000538980 RIMBP3BA6NNM3 1639 aa34.1■■■■□ 3.05
RAP1B-219ENST00000538980 RIMBP3Q9UFD9 1639 aa34.1■■■■□ 3.05
RAP1B-219ENST00000538980 IGF1RP08069 1367 aa34.07■■■■□ 3.04
RAP1B-219ENST00000538980 ARHGEF11O15085 1522 aa34.06■■■■□ 3.04
RAP1B-219ENST00000538980 CEP170Q5SW79 1584 aa34.03■■■■□ 3.04
RAP1B-219ENST00000538980 NUP160Q12769 1436 aa34.01■■■■□ 3.03
RAP1B-219ENST00000538980 RUSC2Q8N2Y8 1516 aa33.97■■■■□ 3.03
RAP1B-219ENST00000538980 CARMIL1Q5VZK9 1371 aa33.9■■■■□ 3.02
RAP1B-219ENST00000538980 SHROOM2Q13796 1616 aa33.79■■■■□ 3
RAP1B-219ENST00000538980 ARAP1Q96P48 1450 aa33.78■■■■□ 3
RAP1B-219ENST00000538980 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
RAP1B-219ENST00000538980 RAPGEF2Q9Y4G8 1499 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms