RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 NISCHQ9Y2I1 1504 aa46.13■■■■■ 4.98
RAP1B-204ENST00000393436 CCDC180Q9P1Z9 1646 aa39.84■■■■□ 3.97
RAP1B-204ENST00000393436 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
RAP1B-204ENST00000393436 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
RAP1B-204ENST00000393436 DCAF8L2P0C7V8 631 aa38.08■■■■□ 3.69
RAP1B-204ENST00000393436 DCAF1Q9Y4B6 1507 aa38.01■■■■□ 3.68
RAP1B-204ENST00000393436 ABCC9O60706 1549 aa37.28■■■■□ 3.56
RAP1B-204ENST00000393436 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.56
RAP1B-204ENST00000393436 SUPT5HO00267 1087 aaKnown RBP37.19■■■■□ 3.54
RAP1B-204ENST00000393436 NACADO15069 1562 aa36.93■■■■□ 3.5
RAP1B-204ENST00000393436 SCRIBQ14160 1630 aa36.93■■■■□ 3.5
RAP1B-204ENST00000393436 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
RAP1B-204ENST00000393436 RSF1Q96T23 1441 aaPredicted RBP36.09■■■■□ 3.37
RAP1B-204ENST00000393436 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
RAP1B-204ENST00000393436 CECR2Q9BXF3 1484 aa35.92■■■■□ 3.34
RAP1B-204ENST00000393436 CHIC1Q5VXU3 224 aa35.88■■■■□ 3.33
RAP1B-204ENST00000393436 MROH2BQ7Z745 1585 aa35.76■■■■□ 3.31
RAP1B-204ENST00000393436 WIZO95785 1651 aa35.55■■■■□ 3.28
RAP1B-204ENST00000393436 BAZ1AQ9NRL2 1556 aaPredicted RBP35.54■■■■□ 3.28
RAP1B-204ENST00000393436 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
RAP1B-204ENST00000393436 SMARCA4P51532 1647 aa35.35■■■■□ 3.25
RAP1B-204ENST00000393436 PABPN1Q86U42 306 aaKnown RBP eCLIP35.34■■■■□ 3.25
RAP1B-204ENST00000393436 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
RAP1B-204ENST00000393436 SMARCA2P51531 1590 aa34.82■■■■□ 3.16
RAP1B-204ENST00000393436 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
RAP1B-204ENST00000393436 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
RAP1B-204ENST00000393436 PEG3Q9GZU2 1588 aa34.8■■■■□ 3.16
RAP1B-204ENST00000393436 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
RAP1B-204ENST00000393436 LOC105371045A0A1W2PR82 267 aa34.65■■■■□ 3.14
RAP1B-204ENST00000393436 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
RAP1B-204ENST00000393436 BAZ1BQ9UIG0 1483 aaKnown RBP34.44■■■■□ 3.1
RAP1B-204ENST00000393436 ABCC8Q09428 1581 aa34.37■■■■□ 3.09
RAP1B-204ENST00000393436 FAM9AQ8IZU1 332 aaPredicted RBP34.35■■■■□ 3.09
RAP1B-204ENST00000393436 HMGXB3Q12766 1538 aa34.11■■■■□ 3.05
RAP1B-204ENST00000393436 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
RAP1B-204ENST00000393436 EHMT2Q96KQ7 1210 aa33.96■■■■□ 3.03
RAP1B-204ENST00000393436 WRNQ14191 1432 aaPredicted RBP eCLIP33.93■■■■□ 3.02
RAP1B-204ENST00000393436 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
RAP1B-204ENST00000393436 SOGA1O94964 1423 aa33.82■■■■□ 3.01
RAP1B-204ENST00000393436 PCGF6Q9BYE7 350 aa33.74■■■□□ 2.99
RAP1B-204ENST00000393436 RUSC2Q8N2Y8 1516 aa33.71■■■□□ 2.99
RAP1B-204ENST00000393436 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
RAP1B-204ENST00000393436 EEA1Q15075 1411 aa33.68■■■□□ 2.98
RAP1B-204ENST00000393436 TOP2BQ02880 1626 aa33.57■■■□□ 2.97
RAP1B-204ENST00000393436 CFTRP13569 1480 aa33.57■■■□□ 2.96
RAP1B-204ENST00000393436 CSRNP3Q8WYN3 585 aa33.55■■■□□ 2.96
RAP1B-204ENST00000393436 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
RAP1B-204ENST00000393436 PRDM2Q13029 1718 aa33.47■■■□□ 2.95
RAP1B-204ENST00000393436 TRIM26Q12899 539 aaPredicted RBP33.44■■■□□ 2.94
RAP1B-204ENST00000393436 CUX1P39880 1505 aa33.37■■■□□ 2.93
RAP1B-204ENST00000393436 TNIKQ9UKE5 1360 aa33.36■■■□□ 2.93
RAP1B-204ENST00000393436 GOLGA3Q08378 1498 aa33.35■■■□□ 2.93
RAP1B-204ENST00000393436 CADPSQ9ULU8 1353 aa33.31■■■□□ 2.92
RAP1B-204ENST00000393436 KIF21BO75037 1637 aa33.31■■■□□ 2.92
RAP1B-204ENST00000393436 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
RAP1B-204ENST00000393436 CEP164Q9UPV0 1460 aa33.26■■■□□ 2.92
RAP1B-204ENST00000393436 UBTFP17480 764 aaKnown RBP33.24■■■□□ 2.91
RAP1B-204ENST00000393436 HRCP23327 699 aa33.24■■■□□ 2.91
RAP1B-204ENST00000393436 RAPGEF2Q9Y4G8 1499 aa33.09■■■□□ 2.89
RAP1B-204ENST00000393436 PPARGC1BQ86YN6 1023 aaKnown RBP33.05■■■□□ 2.88
RAP1B-204ENST00000393436 FANCD2Q9BXW9 1451 aa33■■■□□ 2.87
RAP1B-204ENST00000393436 KIF27Q86VH2 1401 aa32.97■■■□□ 2.87
RAP1B-204ENST00000393436 NESP48681 1621 aa32.97■■■□□ 2.87
RAP1B-204ENST00000393436 PRXQ9BXM0 1461 aa32.94■■■□□ 2.86
RAP1B-204ENST00000393436 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
RAP1B-204ENST00000393436 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
RAP1B-204ENST00000393436 CLIP1P30622 1438 aa32.87■■■□□ 2.85
RAP1B-204ENST00000393436 LAMC3Q9Y6N6 1575 aa32.85■■■□□ 2.85
RAP1B-204ENST00000393436 DNAJC5BQ9UF47 199 aa32.82■■■□□ 2.84
RAP1B-204ENST00000393436 CUX2O14529 1486 aa32.81■■■□□ 2.84
RAP1B-204ENST00000393436 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
RAP1B-204ENST00000393436 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
RAP1B-204ENST00000393436 RANGAP1P46060 587 aaPredicted RBP32.67■■■□□ 2.82
RAP1B-204ENST00000393436 TTBK1Q5TCY1 1321 aaPredicted RBP32.67■■■□□ 2.82
RAP1B-204ENST00000393436 VPS8Q8N3P4 1428 aa32.66■■■□□ 2.82
RAP1B-204ENST00000393436 IGF1RP08069 1367 aa32.65■■■□□ 2.82
RAP1B-204ENST00000393436 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
RAP1B-204ENST00000393436 RAD54L2Q9Y4B4 1467 aa32.6■■■□□ 2.81
RAP1B-204ENST00000393436 URB2Q14146 1524 aaKnown RBP32.59■■■□□ 2.81
RAP1B-204ENST00000393436 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
RAP1B-204ENST00000393436 KIF21AQ7Z4S6 1674 aa32.55■■■□□ 2.8
RAP1B-204ENST00000393436 ABCA10Q8WWZ4 1543 aa32.55■■■□□ 2.8
RAP1B-204ENST00000393436 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
RAP1B-204ENST00000393436 CARMIL1Q5VZK9 1371 aa32.5■■■□□ 2.79
RAP1B-204ENST00000393436 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
RAP1B-204ENST00000393436 ARHGAP35Q9NRY4 1499 aa32.36■■■□□ 2.77
RAP1B-204ENST00000393436 ZEB1P37275 1124 aaPredicted RBP32.35■■■□□ 2.77
RAP1B-204ENST00000393436 APLP2Q06481 763 aa32.33■■■□□ 2.77
RAP1B-204ENST00000393436 CUL7Q14999 1698 aa32.3■■■□□ 2.76
RAP1B-204ENST00000393436 ABCA5Q8WWZ7 1642 aa32.27■■■□□ 2.76
RAP1B-204ENST00000393436 TDRD9Q8NDG6 1382 aaKnown RBP32.2■■■□□ 2.75
RAP1B-204ENST00000393436 TARBP1Q13395 1621 aaKnown RBP32.19■■■□□ 2.74
RAP1B-204ENST00000393436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.19■■■□□ 2.74
RAP1B-204ENST00000393436 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
RAP1B-204ENST00000393436 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
RAP1B-204ENST00000393436 CTTNBP2Q8WZ74 1663 aa32.12■■■□□ 2.73
RAP1B-204ENST00000393436 CCER1Q8TC90 406 aaPredicted RBP32.06■■■□□ 2.72
RAP1B-204ENST00000393436 KANK4Q5T7N3 995 aaPredicted RBP32.05■■■□□ 2.72
RAP1B-204ENST00000393436 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
RAP1B-204ENST00000393436 EFCAB5A4FU69 1503 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms