RNA–Protein interactions for RNA: ENST00000564143.1

UBE2I-211, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

TSL 3

Gene UBE2I, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-211ENST00000564143 NISCHQ9Y2I1 1504 aa33.65■■■□□ 2.98
UBE2I-211ENST00000564143 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
UBE2I-211ENST00000564143 ABCC9O60706 1549 aa30.03■■■□□ 2.4
UBE2I-211ENST00000564143 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
UBE2I-211ENST00000564143 NACADO15069 1562 aa28.44■■■□□ 2.14
UBE2I-211ENST00000564143 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
UBE2I-211ENST00000564143 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
UBE2I-211ENST00000564143 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
UBE2I-211ENST00000564143 UNC13AQ9UPW8 1703 aa28.02■■■□□ 2.08
UBE2I-211ENST00000564143 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
UBE2I-211ENST00000564143 ZCCHC6Q5VYS8 1495 aaKnown RBP27.92■■■□□ 2.06
UBE2I-211ENST00000564143 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
UBE2I-211ENST00000564143 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
UBE2I-211ENST00000564143 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
UBE2I-211ENST00000564143 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
UBE2I-211ENST00000564143 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
UBE2I-211ENST00000564143 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
UBE2I-211ENST00000564143 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
UBE2I-211ENST00000564143 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
UBE2I-211ENST00000564143 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
UBE2I-211ENST00000564143 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
UBE2I-211ENST00000564143 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
UBE2I-211ENST00000564143 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
UBE2I-211ENST00000564143 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
UBE2I-211ENST00000564143 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
UBE2I-211ENST00000564143 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
UBE2I-211ENST00000564143 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
UBE2I-211ENST00000564143 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
UBE2I-211ENST00000564143 NESP48681 1621 aa25.85■■□□□ 1.73
UBE2I-211ENST00000564143 CUX2O14529 1486 aa25.76■■□□□ 1.71
UBE2I-211ENST00000564143 WIZO95785 1651 aa25.68■■□□□ 1.7
UBE2I-211ENST00000564143 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
UBE2I-211ENST00000564143 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
UBE2I-211ENST00000564143 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
UBE2I-211ENST00000564143 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
UBE2I-211ENST00000564143 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
UBE2I-211ENST00000564143 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
UBE2I-211ENST00000564143 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
UBE2I-211ENST00000564143 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
UBE2I-211ENST00000564143 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
UBE2I-211ENST00000564143 WDR62O43379 1518 aa25.21■■□□□ 1.63
UBE2I-211ENST00000564143 CFTRP13569 1480 aa25.21■■□□□ 1.63
UBE2I-211ENST00000564143 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
UBE2I-211ENST00000564143 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
UBE2I-211ENST00000564143 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
UBE2I-211ENST00000564143 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
UBE2I-211ENST00000564143 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
UBE2I-211ENST00000564143 TOPBP1Q92547 1522 aa24.74■■□□□ 1.55
UBE2I-211ENST00000564143 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
UBE2I-211ENST00000564143 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
UBE2I-211ENST00000564143 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
UBE2I-211ENST00000564143 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
UBE2I-211ENST00000564143 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
UBE2I-211ENST00000564143 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
UBE2I-211ENST00000564143 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
UBE2I-211ENST00000564143 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
UBE2I-211ENST00000564143 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
UBE2I-211ENST00000564143 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
UBE2I-211ENST00000564143 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.513e-13■■□□□ 13.2
UBE2I-211ENST00000564143 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
UBE2I-211ENST00000564143 SOGA1O94964 1423 aa24.38■■□□□ 1.49
UBE2I-211ENST00000564143 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
UBE2I-211ENST00000564143 CUX1P39880 1505 aa24.37■■□□□ 1.49
UBE2I-211ENST00000564143 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
UBE2I-211ENST00000564143 CHD1O14646 1710 aa24.34■■□□□ 1.49
UBE2I-211ENST00000564143 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
UBE2I-211ENST00000564143 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
UBE2I-211ENST00000564143 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
UBE2I-211ENST00000564143 FBLN2P98095 1184 aa24.28■■□□□ 1.48
UBE2I-211ENST00000564143 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
UBE2I-211ENST00000564143 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
UBE2I-211ENST00000564143 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
UBE2I-211ENST00000564143 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
UBE2I-211ENST00000564143 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
UBE2I-211ENST00000564143 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
UBE2I-211ENST00000564143 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
UBE2I-211ENST00000564143 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
UBE2I-211ENST00000564143 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
UBE2I-211ENST00000564143 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
UBE2I-211ENST00000564143 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
UBE2I-211ENST00000564143 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
UBE2I-211ENST00000564143 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
UBE2I-211ENST00000564143 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
UBE2I-211ENST00000564143 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
UBE2I-211ENST00000564143 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
UBE2I-211ENST00000564143 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
UBE2I-211ENST00000564143 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
UBE2I-211ENST00000564143 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
UBE2I-211ENST00000564143 GRIN2AQ12879 1464 aa23.85■■□□□ 1.41
UBE2I-211ENST00000564143 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
UBE2I-211ENST00000564143 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
UBE2I-211ENST00000564143 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
UBE2I-211ENST00000564143 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
UBE2I-211ENST00000564143 NUP160Q12769 1436 aa23.75■■□□□ 1.39
UBE2I-211ENST00000564143 ERCC6L2Q5T890 1561 aa23.71■■□□□ 1.39
UBE2I-211ENST00000564143 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
UBE2I-211ENST00000564143 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
UBE2I-211ENST00000564143 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
UBE2I-211ENST00000564143 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
UBE2I-211ENST00000564143 IGF1RP08069 1367 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms