RNA–Protein interactions for RNA: ENST00000395799.7

TNRC6A-202, Transcript of trinucleotide repeat containing 6A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TNRC6A, Length 8,438 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-202ENST00000395799 MYT1Q01538 1121 aa13.37□□□□□ -0.27
TNRC6A-202ENST00000395799 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
TNRC6A-202ENST00000395799 TTBK1Q5TCY1 1321 aaPredicted RBP12.39□□□□□ -0.43
TNRC6A-202ENST00000395799 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
TNRC6A-202ENST00000395799 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
TNRC6A-202ENST00000395799 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
TNRC6A-202ENST00000395799 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
TNRC6A-202ENST00000395799 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
TNRC6A-202ENST00000395799 NEFLP07196 543 aa11.46□□□□□ -0.57
TNRC6A-202ENST00000395799 GLIPR1L2Q4G1C9 344 aa11.45□□□□□ -0.58
TNRC6A-202ENST00000395799 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
TNRC6A-202ENST00000395799 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
TNRC6A-202ENST00000395799 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
TNRC6A-202ENST00000395799 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-202ENST00000395799 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
TNRC6A-202ENST00000395799 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
TNRC6A-202ENST00000395799 HRCP23327 699 aa11.11□□□□□ -0.63
TNRC6A-202ENST00000395799 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
TNRC6A-202ENST00000395799 APLP2Q06481 763 aa10.97□□□□□ -0.65
TNRC6A-202ENST00000395799 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
TNRC6A-202ENST00000395799 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
TNRC6A-202ENST00000395799 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
TNRC6A-202ENST00000395799 EIF5BO60841 1220 aaKnown RBP10.89□□□□□ -0.67
TNRC6A-202ENST00000395799 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
TNRC6A-202ENST00000395799 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
TNRC6A-202ENST00000395799 FAM9AQ8IZU1 332 aaPredicted RBP10.8□□□□□ -0.68
TNRC6A-202ENST00000395799 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
TNRC6A-202ENST00000395799 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
TNRC6A-202ENST00000395799 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
TNRC6A-202ENST00000395799 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
TNRC6A-202ENST00000395799 ANP32BQ92688 251 aaKnown RBP10.69□□□□□ -0.7
TNRC6A-202ENST00000395799 ACIN1Q9UKV3 1341 aaKnown RBP10.68□□□□□ -0.7
TNRC6A-202ENST00000395799 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
TNRC6A-202ENST00000395799 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
TNRC6A-202ENST00000395799 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
TNRC6A-202ENST00000395799 BCL11AQ9H165 835 aa10.64□□□□□ -0.71
TNRC6A-202ENST00000395799 POLR3GLQ9BT43 218 aa10.6□□□□□ -0.71
TNRC6A-202ENST00000395799 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
TNRC6A-202ENST00000395799 CDK11BP21127 795 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-202ENST00000395799 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
TNRC6A-202ENST00000395799 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
TNRC6A-202ENST00000395799 ERICH6BQ5W0A0 696 aa10.52□□□□□ -0.73
TNRC6A-202ENST00000395799 PTMSP20962 102 aa10.44□□□□□ -0.74
TNRC6A-202ENST00000395799 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
TNRC6A-202ENST00000395799 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
TNRC6A-202ENST00000395799 SCAF1Q9H7N4 1312 aaKnown RBP10.3□□□□□ -0.76
TNRC6A-202ENST00000395799 UPF2Q9HAU5 1272 aaKnown RBP10.28□□□□□ -0.76
TNRC6A-202ENST00000395799 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
TNRC6A-202ENST00000395799 NBR1Q14596 966 aa10.25□□□□□ -0.77
TNRC6A-202ENST00000395799 BCANQ96GW7 911 aa10.25□□□□□ -0.77
TNRC6A-202ENST00000395799 ANP32CO43423 234 aa10.25□□□□□ -0.77
TNRC6A-202ENST00000395799 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
TNRC6A-202ENST00000395799 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
TNRC6A-202ENST00000395799 HSP90AA1P07900 732 aaKnown RBP10.23□□□□□ -0.77
TNRC6A-202ENST00000395799 NAP1L5Q96NT1 182 aaPredicted RBP10.23□□□□□ -0.77
TNRC6A-202ENST00000395799 NEFMP07197 916 aa10.22□□□□□ -0.77
TNRC6A-202ENST00000395799 SHROOM4Q9ULL8 1493 aa10.22□□□□□ -0.77
TNRC6A-202ENST00000395799 CNGB1Q14028 1251 aaPredicted RBP10.21□□□□□ -0.77
TNRC6A-202ENST00000395799 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
TNRC6A-202ENST00000395799 ARID4BQ4LE39 1312 aaPredicted RBP10.2□□□□□ -0.78
TNRC6A-202ENST00000395799 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
TNRC6A-202ENST00000395799 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
TNRC6A-202ENST00000395799 CALRP27797 417 aaKnown RBP10.15□□□□□ -0.79
TNRC6A-202ENST00000395799 BECN1Q14457 450 aa10.14□□□□□ -0.79
TNRC6A-202ENST00000395799 L1TD1Q5T7N2 865 aaKnown RBP10.13□□□□□ -0.79
TNRC6A-202ENST00000395799 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
TNRC6A-202ENST00000395799 FKBP8Q14318 412 aa10.13□□□□□ -0.79
TNRC6A-202ENST00000395799 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
TNRC6A-202ENST00000395799 TNNT3P45378 269 aaPredicted RBP10.12□□□□□ -0.79
TNRC6A-202ENST00000395799 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
TNRC6A-202ENST00000395799 DEKP35659 375 aaKnown RBP10.1□□□□□ -0.79
TNRC6A-202ENST00000395799 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
TNRC6A-202ENST00000395799 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
TNRC6A-202ENST00000395799 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
TNRC6A-202ENST00000395799 CHAF1AQ13111 956 aaPredicted RBP10.09□□□□□ -0.79
TNRC6A-202ENST00000395799 UBTFP17480 764 aaKnown RBP10.08□□□□□ -0.8
TNRC6A-202ENST00000395799 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
TNRC6A-202ENST00000395799 A0A0U1RQG5 324 aaPredicted RBP10.05□□□□□ -0.8
TNRC6A-202ENST00000395799 DNTTIP2Q5QJE6 756 aaKnown RBP10.04□□□□□ -0.8
TNRC6A-202ENST00000395799 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
TNRC6A-202ENST00000395799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
TNRC6A-202ENST00000395799 APPP05067 770 aa10.02□□□□□ -0.81
TNRC6A-202ENST00000395799 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
TNRC6A-202ENST00000395799 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.81
TNRC6A-202ENST00000395799 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
TNRC6A-202ENST00000395799 CCDC136Q96JN2 1154 aa10□□□□□ -0.81
TNRC6A-202ENST00000395799 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
TNRC6A-202ENST00000395799 RTN4Q9NQC3 1192 aaKnown RBP9.99□□□□□ -0.81
TNRC6A-202ENST00000395799 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
TNRC6A-202ENST00000395799 CANXP27824 592 aaKnown RBP9.98□□□□□ -0.81
TNRC6A-202ENST00000395799 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
TNRC6A-202ENST00000395799 PTMAP06454 111 aaKnown RBP9.97□□□□□ -0.81
TNRC6A-202ENST00000395799 GOLGA6L3A6NEY3 463 aa9.97□□□□□ -0.81
TNRC6A-202ENST00000395799 GOLGA6L6A8MZA4 724 aa9.95□□□□□ -0.82
TNRC6A-202ENST00000395799 NRDCO43847 1150 aa9.95□□□□□ -0.82
TNRC6A-202ENST00000395799 MTERF4Q7Z6M4 381 aaKnown RBP9.95□□□□□ -0.82
TNRC6A-202ENST00000395799 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.94□□□□□ -0.82
TNRC6A-202ENST00000395799 SETQ01105 290 aaPredicted RBP9.94□□□□□ -0.82
TNRC6A-202ENST00000395799 MAP7D2Q96T17 732 aa9.93□□□□□ -0.82
TNRC6A-202ENST00000395799 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms