RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 NISCHQ9Y2I1 1504 aa43.21■■■■■ 4.51
IRF3-230ENST00000601809 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
IRF3-230ENST00000601809 ABCC9O60706 1549 aa37.74■■■■□ 3.63
IRF3-230ENST00000601809 RB1CC1Q8TDY2 1594 aa36.26■■■■□ 3.39
IRF3-230ENST00000601809 NACADO15069 1562 aa36.21■■■■□ 3.39
IRF3-230ENST00000601809 MYO15BQ96JP2 1530 aa36.02■■■■□ 3.36
IRF3-230ENST00000601809 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
IRF3-230ENST00000601809 DCAF8L2P0C7V8 631 aa35.87■■■■□ 3.33
IRF3-230ENST00000601809 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
IRF3-230ENST00000601809 UNC13AQ9UPW8 1703 aa35.55■■■■□ 3.28
IRF3-230ENST00000601809 BICRAQ9NZM4 1560 aa35.3■■■■□ 3.24
IRF3-230ENST00000601809 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
IRF3-230ENST00000601809 SCRIBQ14160 1630 aa35.05■■■■□ 3.2
IRF3-230ENST00000601809 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
IRF3-230ENST00000601809 SHROOM4Q9ULL8 1493 aa34.85■■■■□ 3.17
IRF3-230ENST00000601809 EIF4G1Q04637 1599 aaKnown RBP34.3■■■■□ 3.08
IRF3-230ENST00000601809 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
IRF3-230ENST00000601809 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
IRF3-230ENST00000601809 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
IRF3-230ENST00000601809 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
IRF3-230ENST00000601809 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
IRF3-230ENST00000601809 ATAD2BQ9ULI0 1458 aa33.42■■■□□ 2.94
IRF3-230ENST00000601809 SMARCA2P51531 1590 aa33.33■■■□□ 2.93
IRF3-230ENST00000601809 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
IRF3-230ENST00000601809 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
IRF3-230ENST00000601809 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
IRF3-230ENST00000601809 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
IRF3-230ENST00000601809 WIZO95785 1651 aa32.92■■■□□ 2.86
IRF3-230ENST00000601809 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
IRF3-230ENST00000601809 NESP48681 1621 aa32.66■■■□□ 2.82
IRF3-230ENST00000601809 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
IRF3-230ENST00000601809 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
IRF3-230ENST00000601809 ERCC6Q03468 1493 aa32.46■■■□□ 2.79
IRF3-230ENST00000601809 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
IRF3-230ENST00000601809 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
IRF3-230ENST00000601809 CUX2O14529 1486 aa32.29■■■□□ 2.76
IRF3-230ENST00000601809 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
IRF3-230ENST00000601809 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.76
IRF3-230ENST00000601809 CFTRP13569 1480 aa32.23■■■□□ 2.75
IRF3-230ENST00000601809 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
IRF3-230ENST00000601809 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
IRF3-230ENST00000601809 MRC2Q9UBG0 1479 aa31.99■■■□□ 2.71
IRF3-230ENST00000601809 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
IRF3-230ENST00000601809 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
IRF3-230ENST00000601809 WDR62O43379 1518 aa31.95■■■□□ 2.71
IRF3-230ENST00000601809 URB2Q14146 1524 aaKnown RBP31.77■■■□□ 2.68
IRF3-230ENST00000601809 SUPT5HO00267 1087 aaKnown RBP31.68■■■□□ 2.66
IRF3-230ENST00000601809 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
IRF3-230ENST00000601809 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
IRF3-230ENST00000601809 DNAJC5Q9H3Z4 198 aa31.47■■■□□ 2.63
IRF3-230ENST00000601809 ABCC8Q09428 1581 aa31.46■■■□□ 2.63
IRF3-230ENST00000601809 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
IRF3-230ENST00000601809 CUX1P39880 1505 aa31.25■■■□□ 2.59
IRF3-230ENST00000601809 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
IRF3-230ENST00000601809 POLA1P09884 1462 aaPredicted RBP31.25■■■□□ 2.59
IRF3-230ENST00000601809 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
IRF3-230ENST00000601809 FGD5Q6ZNL6 1462 aa31.13■■■□□ 2.57
IRF3-230ENST00000601809 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
IRF3-230ENST00000601809 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
IRF3-230ENST00000601809 SOGA1O94964 1423 aa31.05■■■□□ 2.56
IRF3-230ENST00000601809 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.552e-9■■■■□ 26.5
IRF3-230ENST00000601809 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
IRF3-230ENST00000601809 BIVM-ERCC5R4GMW8 1640 aa30.96■■■□□ 2.55
IRF3-230ENST00000601809 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
IRF3-230ENST00000601809 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
IRF3-230ENST00000601809 WRNQ14191 1432 aaPredicted RBP eCLIP30.91■■■□□ 2.54
IRF3-230ENST00000601809 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
IRF3-230ENST00000601809 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
IRF3-230ENST00000601809 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
IRF3-230ENST00000601809 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
IRF3-230ENST00000601809 CHD1O14646 1710 aa30.76■■■□□ 2.52
IRF3-230ENST00000601809 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
IRF3-230ENST00000601809 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
IRF3-230ENST00000601809 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
IRF3-230ENST00000601809 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.51
IRF3-230ENST00000601809 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
IRF3-230ENST00000601809 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
IRF3-230ENST00000601809 FBLN2P98095 1184 aa30.49■■■□□ 2.47
IRF3-230ENST00000601809 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
IRF3-230ENST00000601809 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
IRF3-230ENST00000601809 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
IRF3-230ENST00000601809 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
IRF3-230ENST00000601809 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
IRF3-230ENST00000601809 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
IRF3-230ENST00000601809 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
IRF3-230ENST00000601809 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
IRF3-230ENST00000601809 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
IRF3-230ENST00000601809 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
IRF3-230ENST00000601809 NUP160Q12769 1436 aa30.28■■■□□ 2.44
IRF3-230ENST00000601809 CEP170Q5SW79 1584 aa30.26■■■□□ 2.43
IRF3-230ENST00000601809 KIF27Q86VH2 1401 aa30.24■■■□□ 2.43
IRF3-230ENST00000601809 IGF1RP08069 1367 aa30.21■■■□□ 2.43
IRF3-230ENST00000601809 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
IRF3-230ENST00000601809 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
IRF3-230ENST00000601809 CUL7Q14999 1698 aa30.14■■■□□ 2.42
IRF3-230ENST00000601809 SHROOM2Q13796 1616 aa30.11■■■□□ 2.41
IRF3-230ENST00000601809 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
IRF3-230ENST00000601809 CYB5RLQ6IPT4 315 aa30.03■■■□□ 2.4
IRF3-230ENST00000601809 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
IRF3-230ENST00000601809 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms