RNA–Protein interactions for RNA: ENST00000463817.5

HMGN2-203, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-203ENST00000463817 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
HMGN2-203ENST00000463817 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
HMGN2-203ENST00000463817 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
HMGN2-203ENST00000463817 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
HMGN2-203ENST00000463817 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
HMGN2-203ENST00000463817 FOXD1Q16676 465 aa20.33■□□□□ 0.85
HMGN2-203ENST00000463817 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
HMGN2-203ENST00000463817 MSH5O43196 834 aa19.26■□□□□ 0.67
HMGN2-203ENST00000463817 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
HMGN2-203ENST00000463817 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
HMGN2-203ENST00000463817 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
HMGN2-203ENST00000463817 ADRA2BP18089 450 aa18.57■□□□□ 0.56
HMGN2-203ENST00000463817 ABCC9O60706 1549 aa18.04■□□□□ 0.48
HMGN2-203ENST00000463817 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
HMGN2-203ENST00000463817 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
HMGN2-203ENST00000463817 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
HMGN2-203ENST00000463817 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
HMGN2-203ENST00000463817 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.32
HMGN2-203ENST00000463817 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
HMGN2-203ENST00000463817 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
HMGN2-203ENST00000463817 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
HMGN2-203ENST00000463817 NACADO15069 1562 aa16.91■□□□□ 0.3
HMGN2-203ENST00000463817 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
HMGN2-203ENST00000463817 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
HMGN2-203ENST00000463817 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
HMGN2-203ENST00000463817 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGN2-203ENST00000463817 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
HMGN2-203ENST00000463817 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
HMGN2-203ENST00000463817 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
HMGN2-203ENST00000463817 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
HMGN2-203ENST00000463817 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
HMGN2-203ENST00000463817 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
HMGN2-203ENST00000463817 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
HMGN2-203ENST00000463817 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
HMGN2-203ENST00000463817 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
HMGN2-203ENST00000463817 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
HMGN2-203ENST00000463817 EIF4G1Q04637 1599 aaKnown RBP16.23■□□□□ 0.19
HMGN2-203ENST00000463817 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
HMGN2-203ENST00000463817 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
HMGN2-203ENST00000463817 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
HMGN2-203ENST00000463817 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
HMGN2-203ENST00000463817 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
HMGN2-203ENST00000463817 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
HMGN2-203ENST00000463817 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
HMGN2-203ENST00000463817 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
HMGN2-203ENST00000463817 CUX2O14529 1486 aa15.65■□□□□ 0.1
HMGN2-203ENST00000463817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.13e-13■■■□□ 16.2
HMGN2-203ENST00000463817 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
HMGN2-203ENST00000463817 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
HMGN2-203ENST00000463817 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
HMGN2-203ENST00000463817 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
HMGN2-203ENST00000463817 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
HMGN2-203ENST00000463817 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
HMGN2-203ENST00000463817 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
HMGN2-203ENST00000463817 WIZO95785 1651 aa15.48■□□□□ 0.07
HMGN2-203ENST00000463817 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
HMGN2-203ENST00000463817 NESP48681 1621 aa15.43■□□□□ 0.06
HMGN2-203ENST00000463817 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
HMGN2-203ENST00000463817 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
HMGN2-203ENST00000463817 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
HMGN2-203ENST00000463817 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
HMGN2-203ENST00000463817 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
HMGN2-203ENST00000463817 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
HMGN2-203ENST00000463817 POTEHQ6S545 545 aa15.28■□□□□ 0.04
HMGN2-203ENST00000463817 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
HMGN2-203ENST00000463817 CAPN15O75808 1086 aa15.19■□□□□ 0.02
HMGN2-203ENST00000463817 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
HMGN2-203ENST00000463817 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
HMGN2-203ENST00000463817 DSG3P32926 999 aa15.16■□□□□ 0.02
HMGN2-203ENST00000463817 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
HMGN2-203ENST00000463817 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
HMGN2-203ENST00000463817 WDR62O43379 1518 aa15.1■□□□□ 0.01
HMGN2-203ENST00000463817 TRIM41Q8WV44 630 aa15.06■□□□□ 0
HMGN2-203ENST00000463817 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
HMGN2-203ENST00000463817 CFTRP13569 1480 aa15.01□□□□□ -0.01
HMGN2-203ENST00000463817 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
HMGN2-203ENST00000463817 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
HMGN2-203ENST00000463817 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
HMGN2-203ENST00000463817 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
HMGN2-203ENST00000463817 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
HMGN2-203ENST00000463817 APLP2Q06481 763 aa14.82□□□□□ -0.04
HMGN2-203ENST00000463817 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
HMGN2-203ENST00000463817 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
HMGN2-203ENST00000463817 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
HMGN2-203ENST00000463817 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
HMGN2-203ENST00000463817 ABCB7O75027 752 aa14.78□□□□□ -0.04
HMGN2-203ENST00000463817 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
HMGN2-203ENST00000463817 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
HMGN2-203ENST00000463817 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
HMGN2-203ENST00000463817 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
HMGN2-203ENST00000463817 ZNF608Q9ULD9 1512 aaPredicted RBP14.69□□□□□ -0.06
HMGN2-203ENST00000463817 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
HMGN2-203ENST00000463817 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
HMGN2-203ENST00000463817 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
HMGN2-203ENST00000463817 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
HMGN2-203ENST00000463817 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
HMGN2-203ENST00000463817 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
HMGN2-203ENST00000463817 CUX1P39880 1505 aa14.67□□□□□ -0.06
HMGN2-203ENST00000463817 CHD1O14646 1710 aa14.67□□□□□ -0.06
HMGN2-203ENST00000463817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms