RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
IRF3-209ENST00000595034 CCDC180Q9P1Z9 1646 aa40.86■■■■■ 4.13
IRF3-209ENST00000595034 ABCC9O60706 1549 aa40.61■■■■■ 4.09
IRF3-209ENST00000595034 RB1CC1Q8TDY2 1594 aa38.83■■■■□ 3.81
IRF3-209ENST00000595034 NACADO15069 1562 aa38.62■■■■□ 3.77
IRF3-209ENST00000595034 DCAF8L2P0C7V8 631 aa38.53■■■■□ 3.76
IRF3-209ENST00000595034 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
IRF3-209ENST00000595034 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
IRF3-209ENST00000595034 PABPN1Q86U42 306 aaKnown RBP eCLIP37.83■■■■□ 3.653e-7■□□□□ 10.7
IRF3-209ENST00000595034 DNAJC5BQ9UF47 199 aa37.74■■■■□ 3.63
IRF3-209ENST00000595034 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
IRF3-209ENST00000595034 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
IRF3-209ENST00000595034 BICRAQ9NZM4 1560 aa37.51■■■■□ 3.6
IRF3-209ENST00000595034 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
IRF3-209ENST00000595034 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
IRF3-209ENST00000595034 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
IRF3-209ENST00000595034 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
IRF3-209ENST00000595034 CECR2Q9BXF3 1484 aa36.59■■■■□ 3.45
IRF3-209ENST00000595034 NCAPD3P42695 1498 aa35.61■■■■□ 3.29
IRF3-209ENST00000595034 SMARCA4P51532 1647 aa35.53■■■■□ 3.28
IRF3-209ENST00000595034 ATAD2BQ9ULI0 1458 aa35.52■■■■□ 3.28
IRF3-209ENST00000595034 SMARCA2P51531 1590 aa35.51■■■■□ 3.28
IRF3-209ENST00000595034 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
IRF3-209ENST00000595034 HMGXB3Q12766 1538 aa35.38■■■■□ 3.25
IRF3-209ENST00000595034 BAZ1BQ9UIG0 1483 aaKnown RBP35.26■■■■□ 3.23
IRF3-209ENST00000595034 PEG3Q9GZU2 1588 aa35.19■■■■□ 3.22
IRF3-209ENST00000595034 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
IRF3-209ENST00000595034 MROH2BQ7Z745 1585 aa35.1■■■■□ 3.21
IRF3-209ENST00000595034 CUX2O14529 1486 aa34.98■■■■□ 3.19
IRF3-209ENST00000595034 NESP48681 1621 aa34.88■■■■□ 3.17
IRF3-209ENST00000595034 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
IRF3-209ENST00000595034 WIZO95785 1651 aa34.68■■■■□ 3.14
IRF3-209ENST00000595034 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
IRF3-209ENST00000595034 DNAJC5Q9H3Z4 198 aa34.64■■■■□ 3.14
IRF3-209ENST00000595034 CADPSQ9ULU8 1353 aa34.57■■■■□ 3.12
IRF3-209ENST00000595034 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
IRF3-209ENST00000595034 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
IRF3-209ENST00000595034 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
IRF3-209ENST00000595034 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
IRF3-209ENST00000595034 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
IRF3-209ENST00000595034 CEP164Q9UPV0 1460 aa34.22■■■■□ 3.07
IRF3-209ENST00000595034 CFTRP13569 1480 aa34.2■■■■□ 3.06
IRF3-209ENST00000595034 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
IRF3-209ENST00000595034 WDR62O43379 1518 aa34.14■■■■□ 3.06
IRF3-209ENST00000595034 CCDC88BA6NC98 1476 aa33.93■■■■□ 3.02
IRF3-209ENST00000595034 PRDM2Q13029 1718 aa33.82■■■■□ 3
IRF3-209ENST00000595034 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
IRF3-209ENST00000595034 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
IRF3-209ENST00000595034 IFT140Q96RY7 1462 aa33.53■■■□□ 2.96
IRF3-209ENST00000595034 TOPBP1Q92547 1522 aa33.52■■■□□ 2.96
IRF3-209ENST00000595034 OSCARQ8IYS5 282 aa33.47■■■□□ 2.95
IRF3-209ENST00000595034 DNMBPQ6XZF7 1577 aa33.44■■■□□ 2.94
IRF3-209ENST00000595034 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
IRF3-209ENST00000595034 TRIM41Q8WV44 630 aa33.27■■■□□ 2.92
IRF3-209ENST00000595034 SUPT5HO00267 1087 aaKnown RBP33.24■■■□□ 2.91
IRF3-209ENST00000595034 EIF4G3O43432 1585 aaKnown RBP33.2■■■□□ 2.91
IRF3-209ENST00000595034 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
IRF3-209ENST00000595034 TARBP1Q13395 1621 aaKnown RBP33.14■■■□□ 2.9
IRF3-209ENST00000595034 SOGA1O94964 1423 aa33.11■■■□□ 2.89
IRF3-209ENST00000595034 AQRO60306 1485 aaKnown RBP eCLIP33.09■■■□□ 2.891e-9■■■■□ 24.2
IRF3-209ENST00000595034 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
IRF3-209ENST00000595034 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
IRF3-209ENST00000595034 CUX1P39880 1505 aa32.98■■■□□ 2.87
IRF3-209ENST00000595034 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
IRF3-209ENST00000595034 TDRD9Q8NDG6 1382 aaKnown RBP32.96■■■□□ 2.87
IRF3-209ENST00000595034 FBLN2P98095 1184 aa32.96■■■□□ 2.87
IRF3-209ENST00000595034 RIMBP3CA6NJZ7 1639 aa32.86■■■□□ 2.85
IRF3-209ENST00000595034 RIMBP3BA6NNM3 1639 aa32.86■■■□□ 2.85
IRF3-209ENST00000595034 RIMBP3Q9UFD9 1639 aa32.86■■■□□ 2.85
IRF3-209ENST00000595034 CHD1O14646 1710 aa32.85■■■□□ 2.85
IRF3-209ENST00000595034 ARHGEF11O15085 1522 aa32.82■■■□□ 2.85
IRF3-209ENST00000595034 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
IRF3-209ENST00000595034 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
IRF3-209ENST00000595034 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
IRF3-209ENST00000595034 CHMP7Q8WUX9 453 aaPredicted RBP32.77■■■□□ 2.84
IRF3-209ENST00000595034 GAPVD1Q14C86 1478 aa32.69■■■□□ 2.82
IRF3-209ENST00000595034 ABCA10Q8WWZ4 1543 aa32.68■■■□□ 2.82
IRF3-209ENST00000595034 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
IRF3-209ENST00000595034 SYNJ2O15056 1496 aa32.66■■■□□ 2.82
IRF3-209ENST00000595034 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
IRF3-209ENST00000595034 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
IRF3-209ENST00000595034 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
IRF3-209ENST00000595034 TOP2BQ02880 1626 aa32.56■■■□□ 2.8
IRF3-209ENST00000595034 ABCA5Q8WWZ7 1642 aa32.55■■■□□ 2.8
IRF3-209ENST00000595034 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
IRF3-209ENST00000595034 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.8
IRF3-209ENST00000595034 ARAP1Q96P48 1450 aa32.48■■■□□ 2.79
IRF3-209ENST00000595034 GRIN2AQ12879 1464 aa32.34■■■□□ 2.77
IRF3-209ENST00000595034 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
IRF3-209ENST00000595034 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
IRF3-209ENST00000595034 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
IRF3-209ENST00000595034 TRHP20396 242 aaPredicted RBP32.26■■■□□ 2.75
IRF3-209ENST00000595034 NUP160Q12769 1436 aa32.2■■■□□ 2.75
IRF3-209ENST00000595034 CEP170Q5SW79 1584 aa32.14■■■□□ 2.74
IRF3-209ENST00000595034 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
IRF3-209ENST00000595034 SHROOM2Q13796 1616 aa31.98■■■□□ 2.71
IRF3-209ENST00000595034 ERCC6L2Q5T890 1561 aa31.94■■■□□ 2.7
IRF3-209ENST00000595034 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
IRF3-209ENST00000595034 PRG4Q92954 1404 aaPredicted RBP31.92■■■□□ 2.7
IRF3-209ENST00000595034 IGF1RP08069 1367 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms