RNA–Protein interactions for RNA: ENST00000356388.8

SPRED2-201, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SPRED2, Length 4,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-201ENST00000356388 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
SPRED2-201ENST00000356388 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
SPRED2-201ENST00000356388 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
SPRED2-201ENST00000356388 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
SPRED2-201ENST00000356388 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
SPRED2-201ENST00000356388 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
SPRED2-201ENST00000356388 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.89
SPRED2-201ENST00000356388 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
SPRED2-201ENST00000356388 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
SPRED2-201ENST00000356388 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
SPRED2-201ENST00000356388 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
SPRED2-201ENST00000356388 HRCP23327 699 aa20.06■□□□□ 0.8
SPRED2-201ENST00000356388 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
SPRED2-201ENST00000356388 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
SPRED2-201ENST00000356388 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
SPRED2-201ENST00000356388 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
SPRED2-201ENST00000356388 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
SPRED2-201ENST00000356388 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
SPRED2-201ENST00000356388 ABCC9O60706 1549 aa19.64■□□□□ 0.73
SPRED2-201ENST00000356388 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
SPRED2-201ENST00000356388 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
SPRED2-201ENST00000356388 APLP2Q06481 763 aa19.58■□□□□ 0.73
SPRED2-201ENST00000356388 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
SPRED2-201ENST00000356388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
SPRED2-201ENST00000356388 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
SPRED2-201ENST00000356388 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
SPRED2-201ENST00000356388 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
SPRED2-201ENST00000356388 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
SPRED2-201ENST00000356388 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
SPRED2-201ENST00000356388 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
SPRED2-201ENST00000356388 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
SPRED2-201ENST00000356388 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
SPRED2-201ENST00000356388 ITGAEP38570 1179 aa19.02■□□□□ 0.63
SPRED2-201ENST00000356388 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
SPRED2-201ENST00000356388 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
SPRED2-201ENST00000356388 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SPRED2-201ENST00000356388 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
SPRED2-201ENST00000356388 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
SPRED2-201ENST00000356388 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
SPRED2-201ENST00000356388 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
SPRED2-201ENST00000356388 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
SPRED2-201ENST00000356388 NACADO15069 1562 aa18.57■□□□□ 0.56
SPRED2-201ENST00000356388 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
SPRED2-201ENST00000356388 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
SPRED2-201ENST00000356388 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
SPRED2-201ENST00000356388 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
SPRED2-201ENST00000356388 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
SPRED2-201ENST00000356388 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
SPRED2-201ENST00000356388 SOGA1O94964 1423 aa18.45■□□□□ 0.54
SPRED2-201ENST00000356388 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
SPRED2-201ENST00000356388 WIZO95785 1651 aa18.4■□□□□ 0.54
SPRED2-201ENST00000356388 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
SPRED2-201ENST00000356388 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
SPRED2-201ENST00000356388 CLIP1P30622 1438 aa18.36■□□□□ 0.53
SPRED2-201ENST00000356388 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.539e-6■■■■■ 50.1
SPRED2-201ENST00000356388 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
SPRED2-201ENST00000356388 NEFLP07196 543 aa18.34■□□□□ 0.53
SPRED2-201ENST00000356388 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
SPRED2-201ENST00000356388 MIER1Q8N108 512 aa18.3■□□□□ 0.52
SPRED2-201ENST00000356388 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
SPRED2-201ENST00000356388 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
SPRED2-201ENST00000356388 BCANQ96GW7 911 aa18.23■□□□□ 0.51
SPRED2-201ENST00000356388 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
SPRED2-201ENST00000356388 EEA1Q15075 1411 aa18.22■□□□□ 0.51
SPRED2-201ENST00000356388 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
SPRED2-201ENST00000356388 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
SPRED2-201ENST00000356388 TRIM52Q96A61 297 aa18.15■□□□□ 0.5
SPRED2-201ENST00000356388 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
SPRED2-201ENST00000356388 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
SPRED2-201ENST00000356388 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
SPRED2-201ENST00000356388 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
SPRED2-201ENST00000356388 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
SPRED2-201ENST00000356388 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
SPRED2-201ENST00000356388 ANP32CO43423 234 aa18.01■□□□□ 0.47
SPRED2-201ENST00000356388 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
SPRED2-201ENST00000356388 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
SPRED2-201ENST00000356388 FBLN2P98095 1184 aa17.95■□□□□ 0.46
SPRED2-201ENST00000356388 CHIC2Q9UKJ5 165 aa17.95■□□□□ 0.46
SPRED2-201ENST00000356388 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
SPRED2-201ENST00000356388 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
SPRED2-201ENST00000356388 SIN3AQ96ST3 1273 aa17.9■□□□□ 0.46
SPRED2-201ENST00000356388 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.46
SPRED2-201ENST00000356388 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
SPRED2-201ENST00000356388 MYT1Q01538 1121 aa17.87■□□□□ 0.45
SPRED2-201ENST00000356388 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
SPRED2-201ENST00000356388 FKBP8Q14318 412 aa17.86■□□□□ 0.45
SPRED2-201ENST00000356388 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
SPRED2-201ENST00000356388 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
SPRED2-201ENST00000356388 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
SPRED2-201ENST00000356388 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
SPRED2-201ENST00000356388 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
SPRED2-201ENST00000356388 CUX2O14529 1486 aa17.78■□□□□ 0.44
SPRED2-201ENST00000356388 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
SPRED2-201ENST00000356388 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
SPRED2-201ENST00000356388 HNRNPUQ00839 825 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPRED2-201ENST00000356388 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
SPRED2-201ENST00000356388 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
SPRED2-201ENST00000356388 FAM9BQ8IZU0 186 aa17.67■□□□□ 0.42
SPRED2-201ENST00000356388 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
SPRED2-201ENST00000356388 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms