RNA–Protein interactions for RNA: ENST00000491718.5

TNRC6A-207, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 7,956 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-207ENST00000491718 MYT1Q01538 1121 aa11.29□□□□□ -0.6
TNRC6A-207ENST00000491718 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
TNRC6A-207ENST00000491718 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
TNRC6A-207ENST00000491718 TTBK1Q5TCY1 1321 aaPredicted RBP10.67□□□□□ -0.7
TNRC6A-207ENST00000491718 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
TNRC6A-207ENST00000491718 HRCP23327 699 aa10.36□□□□□ -0.75
TNRC6A-207ENST00000491718 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
TNRC6A-207ENST00000491718 SUPT5HO00267 1087 aaKnown RBP10.22□□□□□ -0.77
TNRC6A-207ENST00000491718 PCGF6Q9BYE7 350 aa10.08□□□□□ -0.8
TNRC6A-207ENST00000491718 DCAF8L2P0C7V8 631 aa10.08□□□□□ -0.8
TNRC6A-207ENST00000491718 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
TNRC6A-207ENST00000491718 DCAF1Q9Y4B6 1507 aa9.97□□□□□ -0.81
TNRC6A-207ENST00000491718 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
TNRC6A-207ENST00000491718 SHROOM4Q9ULL8 1493 aa9.93□□□□□ -0.82
TNRC6A-207ENST00000491718 ERICH6Q7L0X2 663 aa9.87□□□□□ -0.83
TNRC6A-207ENST00000491718 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
TNRC6A-207ENST00000491718 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
TNRC6A-207ENST00000491718 CHIC1Q5VXU3 224 aa9.79□□□□□ -0.84
TNRC6A-207ENST00000491718 CCDC180Q9P1Z9 1646 aa9.74□□□□□ -0.85
TNRC6A-207ENST00000491718 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
TNRC6A-207ENST00000491718 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
TNRC6A-207ENST00000491718 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
TNRC6A-207ENST00000491718 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
TNRC6A-207ENST00000491718 APLP2Q06481 763 aa9.55□□□□□ -0.88
TNRC6A-207ENST00000491718 NEFLP07196 543 aa9.52□□□□□ -0.89
TNRC6A-207ENST00000491718 FAM9AQ8IZU1 332 aaPredicted RBP9.51□□□□□ -0.89
TNRC6A-207ENST00000491718 GTF3C3Q9Y5Q9 886 aa9.49□□□□□ -0.89
TNRC6A-207ENST00000491718 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
TNRC6A-207ENST00000491718 SCAF1Q9H7N4 1312 aaKnown RBP9.45□□□□□ -0.9
TNRC6A-207ENST00000491718 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
TNRC6A-207ENST00000491718 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.9
TNRC6A-207ENST00000491718 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
TNRC6A-207ENST00000491718 ANP32EQ9BTT0 268 aa9.36□□□□□ -0.91
TNRC6A-207ENST00000491718 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
TNRC6A-207ENST00000491718 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
TNRC6A-207ENST00000491718 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
TNRC6A-207ENST00000491718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.27□□□□□ -0.92
TNRC6A-207ENST00000491718 EEA1Q15075 1411 aa9.24□□□□□ -0.93
TNRC6A-207ENST00000491718 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
TNRC6A-207ENST00000491718 GLIPR1L2Q4G1C9 344 aa9.24□□□□□ -0.93
TNRC6A-207ENST00000491718 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
TNRC6A-207ENST00000491718 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
TNRC6A-207ENST00000491718 MYO15BQ96JP2 1530 aa9.16□□□□□ -0.94
TNRC6A-207ENST00000491718 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
TNRC6A-207ENST00000491718 DAXXQ9UER7 740 aaPredicted RBP9.1□□□□□ -0.95
TNRC6A-207ENST00000491718 WRNQ14191 1432 aaPredicted RBP eCLIP9.09□□□□□ -0.95
TNRC6A-207ENST00000491718 HNRNPUL2Q1KMD3 747 aaKnown RBP9.08□□□□□ -0.96
TNRC6A-207ENST00000491718 TIMELESSQ9UNS1 1208 aa9.07□□□□□ -0.96
TNRC6A-207ENST00000491718 ANP32AP39687 249 aaKnown RBP9.01□□□□□ -0.97
TNRC6A-207ENST00000491718 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
TNRC6A-207ENST00000491718 ANP32CO43423 234 aa8.99□□□□□ -0.97
TNRC6A-207ENST00000491718 MIER1Q8N108 512 aa8.98□□□□□ -0.97
TNRC6A-207ENST00000491718 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
TNRC6A-207ENST00000491718 RB1CC1Q8TDY2 1594 aa8.97□□□□□ -0.97
TNRC6A-207ENST00000491718 BCANQ96GW7 911 aa8.97□□□□□ -0.97
TNRC6A-207ENST00000491718 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
TNRC6A-207ENST00000491718 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.97
TNRC6A-207ENST00000491718 CCER2I3L3R5 266 aa8.96□□□□□ -0.98
TNRC6A-207ENST00000491718 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
TNRC6A-207ENST00000491718 ABCC9O60706 1549 aa8.94□□□□□ -0.98
TNRC6A-207ENST00000491718 ARID4BQ4LE39 1312 aaPredicted RBP8.93□□□□□ -0.98
TNRC6A-207ENST00000491718 FKBP8Q14318 412 aa8.93□□□□□ -0.98
TNRC6A-207ENST00000491718 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
TNRC6A-207ENST00000491718 GOLGA3Q08378 1498 aa8.88□□□□□ -0.99
TNRC6A-207ENST00000491718 TSHZ2Q9NRE2 1034 aa8.88□□□□□ -0.99
TNRC6A-207ENST00000491718 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
TNRC6A-207ENST00000491718 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
TNRC6A-207ENST00000491718 CEP162Q5TB80 1403 aa8.84□□□□□ -0.99
TNRC6A-207ENST00000491718 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
TNRC6A-207ENST00000491718 RSF1Q96T23 1441 aaPredicted RBP8.83□□□□□ -1
TNRC6A-207ENST00000491718 CEP164Q9UPV0 1460 aa8.83□□□□□ -1
TNRC6A-207ENST00000491718 PPP4R2Q9NY27 417 aa8.82□□□□□ -1
TNRC6A-207ENST00000491718 ZBTB47Q9UFB7 747 aaPredicted RBP8.82□□□□□ -1
TNRC6A-207ENST00000491718 RSPH6AQ9H0K4 717 aa8.82□□□□□ -1
TNRC6A-207ENST00000491718 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
TNRC6A-207ENST00000491718 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
TNRC6A-207ENST00000491718 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
TNRC6A-207ENST00000491718 PRKCSHP14314 528 aaPredicted RBP8.79□□□□□ -1
TNRC6A-207ENST00000491718 ITGAEP38570 1179 aa8.78□□□□□ -1
TNRC6A-207ENST00000491718 BAZ1BQ9UIG0 1483 aaKnown RBP8.78□□□□□ -1
TNRC6A-207ENST00000491718 CLIP1P30622 1438 aa8.76□□□□□ -1.01
TNRC6A-207ENST00000491718 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
TNRC6A-207ENST00000491718 DEKP35659 375 aaKnown RBP8.75□□□□□ -1.01
TNRC6A-207ENST00000491718 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
TNRC6A-207ENST00000491718 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
TNRC6A-207ENST00000491718 TONSLQ96HA7 1378 aa8.71□□□□□ -1.01
TNRC6A-207ENST00000491718 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
TNRC6A-207ENST00000491718 DDX10Q13206 875 aaKnown RBP8.71□□□□□ -1.02
TNRC6A-207ENST00000491718 UBE2Q2Q8WVN8 375 aa8.7□□□□□ -1.02
TNRC6A-207ENST00000491718 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
TNRC6A-207ENST00000491718 NEFMP07197 916 aa8.68□□□□□ -1.02
TNRC6A-207ENST00000491718 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
TNRC6A-207ENST00000491718 ANP32BQ92688 251 aaKnown RBP8.67□□□□□ -1.02
TNRC6A-207ENST00000491718 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
TNRC6A-207ENST00000491718 PTMSP20962 102 aa8.67□□□□□ -1.02
TNRC6A-207ENST00000491718 TRIM44Q96DX7 344 aaPredicted RBP8.66□□□□□ -1.02
TNRC6A-207ENST00000491718 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
TNRC6A-207ENST00000491718 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
TNRC6A-207ENST00000491718 NACADO15069 1562 aa8.66□□□□□ -1.02
TNRC6A-207ENST00000491718 TCERG1O14776 1098 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms