RNA–Protein interactions for RNA: ENST00000576878.1

SRRM2-228, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 1,141 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-228ENST00000576878 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
SRRM2-228ENST00000576878 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
SRRM2-228ENST00000576878 ABCC9O60706 1549 aa36.29■■■■□ 3.4
SRRM2-228ENST00000576878 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
SRRM2-228ENST00000576878 NACADO15069 1562 aa35.07■■■■□ 3.2
SRRM2-228ENST00000576878 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
SRRM2-228ENST00000576878 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
SRRM2-228ENST00000576878 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
SRRM2-228ENST00000576878 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
SRRM2-228ENST00000576878 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
SRRM2-228ENST00000576878 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
SRRM2-228ENST00000576878 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
SRRM2-228ENST00000576878 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
SRRM2-228ENST00000576878 SHROOM4Q9ULL8 1493 aa33.69■■■□□ 2.98
SRRM2-228ENST00000576878 EIF4G1Q04637 1599 aaKnown RBP33.07■■■□□ 2.88
SRRM2-228ENST00000576878 DNAJC5BQ9UF47 199 aa33.01■■■□□ 2.87
SRRM2-228ENST00000576878 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
SRRM2-228ENST00000576878 CECR2Q9BXF3 1484 aa32.75■■■□□ 2.83
SRRM2-228ENST00000576878 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
SRRM2-228ENST00000576878 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
SRRM2-228ENST00000576878 MROH2BQ7Z745 1585 aa32.45■■■□□ 2.79
SRRM2-228ENST00000576878 SMARCA2P51531 1590 aa32.39■■■□□ 2.78
SRRM2-228ENST00000576878 ATAD2BQ9ULI0 1458 aa32.38■■■□□ 2.77
SRRM2-228ENST00000576878 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
SRRM2-228ENST00000576878 NCAPD3P42695 1498 aa32.31■■■□□ 2.76
SRRM2-228ENST00000576878 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
SRRM2-228ENST00000576878 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
SRRM2-228ENST00000576878 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
SRRM2-228ENST00000576878 WIZO95785 1651 aa32.14■■■□□ 2.74
SRRM2-228ENST00000576878 TOP2AP11388 1531 aaKnown RBP31.83■■■□□ 2.69
SRRM2-228ENST00000576878 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
SRRM2-228ENST00000576878 NESP48681 1621 aa31.47■■■□□ 2.63
SRRM2-228ENST00000576878 SUPT5HO00267 1087 aaKnown RBP31.44■■■□□ 2.62
SRRM2-228ENST00000576878 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
SRRM2-228ENST00000576878 CADPSQ9ULU8 1353 aa31.37■■■□□ 2.61
SRRM2-228ENST00000576878 ERCC6Q03468 1493 aa31.27■■■□□ 2.6
SRRM2-228ENST00000576878 CFTRP13569 1480 aa31.26■■■□□ 2.59
SRRM2-228ENST00000576878 PDS5BQ9NTI5 1447 aa31.21■■■□□ 2.59
SRRM2-228ENST00000576878 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
SRRM2-228ENST00000576878 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
SRRM2-228ENST00000576878 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
SRRM2-228ENST00000576878 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
SRRM2-228ENST00000576878 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
SRRM2-228ENST00000576878 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
SRRM2-228ENST00000576878 CUX2O14529 1486 aa30.88■■■□□ 2.53
SRRM2-228ENST00000576878 WDR62O43379 1518 aa30.82■■■□□ 2.52
SRRM2-228ENST00000576878 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
SRRM2-228ENST00000576878 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
SRRM2-228ENST00000576878 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
SRRM2-228ENST00000576878 TOPBP1Q92547 1522 aa30.59■■■□□ 2.49
SRRM2-228ENST00000576878 CUX1P39880 1505 aa30.45■■■□□ 2.47
SRRM2-228ENST00000576878 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
SRRM2-228ENST00000576878 IFT140Q96RY7 1462 aa30.33■■■□□ 2.45
SRRM2-228ENST00000576878 WRNQ14191 1432 aaPredicted RBP eCLIP30.31■■■□□ 2.44
SRRM2-228ENST00000576878 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
SRRM2-228ENST00000576878 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
SRRM2-228ENST00000576878 SYNJ1O43426 1573 aa30.27■■■□□ 2.44
SRRM2-228ENST00000576878 TOP2BQ02880 1626 aa30.26■■■□□ 2.44
SRRM2-228ENST00000576878 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
SRRM2-228ENST00000576878 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
SRRM2-228ENST00000576878 SOGA1O94964 1423 aa30.17■■■□□ 2.42
SRRM2-228ENST00000576878 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
SRRM2-228ENST00000576878 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
SRRM2-228ENST00000576878 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
SRRM2-228ENST00000576878 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
SRRM2-228ENST00000576878 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.396e-12■■■■□ 20.4
SRRM2-228ENST00000576878 TDRD9Q8NDG6 1382 aaKnown RBP29.96■■■□□ 2.39
SRRM2-228ENST00000576878 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
SRRM2-228ENST00000576878 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
SRRM2-228ENST00000576878 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
SRRM2-228ENST00000576878 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
SRRM2-228ENST00000576878 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
SRRM2-228ENST00000576878 MAGI1Q96QZ7 1491 aaPredicted RBP29.75■■■□□ 2.35
SRRM2-228ENST00000576878 CHD1O14646 1710 aa29.71■■■□□ 2.35
SRRM2-228ENST00000576878 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
SRRM2-228ENST00000576878 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
SRRM2-228ENST00000576878 KIF27Q86VH2 1401 aa29.66■■■□□ 2.34
SRRM2-228ENST00000576878 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
SRRM2-228ENST00000576878 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
SRRM2-228ENST00000576878 FBLN2P98095 1184 aa29.55■■■□□ 2.32
SRRM2-228ENST00000576878 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
SRRM2-228ENST00000576878 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
SRRM2-228ENST00000576878 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
SRRM2-228ENST00000576878 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.31
SRRM2-228ENST00000576878 CUL7Q14999 1698 aa29.5■■■□□ 2.31
SRRM2-228ENST00000576878 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
SRRM2-228ENST00000576878 IGF1RP08069 1367 aa29.47■■■□□ 2.31
SRRM2-228ENST00000576878 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
SRRM2-228ENST00000576878 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
SRRM2-228ENST00000576878 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
SRRM2-228ENST00000576878 CEP170Q5SW79 1584 aa29.32■■■□□ 2.28
SRRM2-228ENST00000576878 CARMIL1Q5VZK9 1371 aa29.32■■■□□ 2.28
SRRM2-228ENST00000576878 NUP160Q12769 1436 aa29.31■■■□□ 2.28
SRRM2-228ENST00000576878 EEA1Q15075 1411 aa29.27■■■□□ 2.28
SRRM2-228ENST00000576878 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
SRRM2-228ENST00000576878 PRXQ9BXM0 1461 aa29.16■■■□□ 2.26
SRRM2-228ENST00000576878 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
SRRM2-228ENST00000576878 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
SRRM2-228ENST00000576878 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
SRRM2-228ENST00000576878 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms